RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TAS1R3Q7RTX0 852 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 SPEM1Q8N4L4 309 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 LEMD2Q8NC56 503 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 APPL2Q8NEU8 664 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 TTC8Q8TAM2 541 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 DDX12PQ92771 950 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 CHAMP1Q96JM3 812 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 PGLYRP2Q96PD5 576 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 ANKFY1Q9P2R3 1169 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 TUBGCP4Q9UGJ1 667 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 YIPF1Q9Y548 306 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 MYH11P35749 1972 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 A0A1W2PRU2 124 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 HIP1RO75146 1068 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 OR4Q2P0C623 313 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 HOXC13P31276 330 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 EPHA5P54756 1037 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 PTGDRQ13258 359 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 LRRC32Q14392 662 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 CSRP2Q16527 193 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 TTC38Q5R3I4 469 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 STXBP5Q5T5C0 1151 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 SPAG17Q6Q759 2223 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 MPZL3Q6UWV2 235 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 DAW1Q8N136 415 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 NUP210Q8TEM1 1887 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 KMT5AQ9NQR1 393 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 C2orf42Q9NWW7 574 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 LRWD1Q9UFC0 647 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 PCDHB8Q9UN66 801 aa15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 TIMM13Q9Y5L4 95 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-206ENST00000538456 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 CHD6Q8TD26 2715 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 K7ESF4 209 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 ABLIM1O14639 778 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 SLC16A4O15374 487 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 MUTP22033 750 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 PROZP22891 400 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 MARCKSP29966 332 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 YWHAHQ04917 246 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 SPAG1Q07617 926 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 NBR1Q14596 966 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 WDR44Q5JSH3 913 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 TXNDC11Q6PKC3 985 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 CEP68Q76N32 757 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 FAM160A2Q8N612 972 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 FAM200AQ8TCP9 573 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 ZFYVE19Q96K21 471 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 ZBTB45Q96K62 511 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 TMEM134Q9H6X4 195 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 ARHGAP28Q9P2N2 729 aa15.29■□□□□ 0.04
SMARCA4-206ENST00000538456 E9PMD0 336 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 SPECC1L-ADORA2AF8WAN1 911 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 CHADO15335 359 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 VNN2O95498 520 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.043e-7■■■■□ 22.7
SMARCA4-206ENST00000538456 ANAPC15P60006 121 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 FCHO2Q0JRZ9 810 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 ST3GAL1Q11201 340 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 ORC2Q13416 577 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 NOLC1Q14978 699 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 LONP2Q86WA8 852 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 TMC8Q8IU68 726 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 E2F7Q96AV8 911 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 C8orf76Q96K31 380 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 GPR88Q9GZN0 384 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 DNAJC25Q9H1X3 360 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 CRISPLD1Q9H336 500 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 GTSE1Q9NYZ3 720 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 CACNA1GO43497 2377 aa15.28■□□□□ 0.04
SMARCA4-206ENST00000538456 ANK1P16157 1881 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 SFI1A8K8P3 1242 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 CXCL8P10145 99 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 CTHP32929 405 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 CNR2P34972 360 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 EPHB3P54753 998 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 DUSP4Q13115 394 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 PLD1Q13393 1074 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 GNL2Q13823 731 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 PON2Q15165 354 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 CCDC6Q16204 474 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 SLC10A6Q3KNW5 377 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 C1orf228Q6PIY5 440 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 ARID3BQ8IVW6 561 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 MSANTD3Q96H12 275 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 DRC1Q96MC2 740 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 LRRC3Q9BY71 257 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 SLC27A5Q9Y2P5 690 aa15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 RBM19Q9Y4C8 960 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-206ENST00000538456 ATG2BQ96BY7 2078 aa15.27■□□□□ 0.03
SMARCA4-206ENST00000538456 PP2D1A8MPX8 630 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 DPYSL4O14531 572 aa15.26■□□□□ 0.03
SMARCA4-206ENST00000538456 TOM1L1O75674 476 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms