RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PCDHAC1Q9H158 963 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 PABPC3Q9H361 631 aaKnown RBP4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 HEYLQ9NQ87 328 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 NECTIN3Q9NQS3 549 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 ABCF3Q9NUQ8 709 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMEM160Q9NX00 188 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 ERVK13-1Q9NX77 482 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 CALCOCO1Q9P1Z2 691 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 MTRRQ9UBK8 725 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 ASH2LQ9UBL3 628 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 RASAL2Q9UJF2 1139 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 MTO1Q9Y2Z2 717 aaKnown RBP4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZNF711Q9Y462 761 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 SNX8Q9Y5X2 465 aa4.05□□□□□ -1.76
HMGB1P22-201ENST00000505315 MYBBP1AQ9BQG0 1328 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 IRS2Q9Y4H2 1338 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMEM82A0PJX8 343 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 E7EVH7 732 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 PTGES3LE9PB15 166 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 H0Y3Z8 333 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 PYCARD-AS1I3L0S3 204 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 ACOT7O00154 380 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 RAB27BO00194 218 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 NFIBO00712 420 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 MTSS1O43312 755 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 DNPH1O43598 174 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 OPHN1O60890 802 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 COBLO75128 1261 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 MAFO75444 373 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 FAM155BO75949 473 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 TGDSO95455 350 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SRGAP2BP0DMP2 458 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 BMP3P12645 472 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 MAP4P27816 1152 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 ABCD3P28288 659 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 PGM1P36871 562 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 GPR15P49685 360 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 MMP14P50281 582 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 CCR5P51681 352 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 AFF3P51826 1226 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 RBM5P52756 815 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SEC24CP53992 1094 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 EPHA5P54756 1037 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 RPP30P78346 268 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 EGR3Q06889 387 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 NEXNQ0ZGT2 675 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 GALNT2Q10471 571 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SCAPQ12770 1279 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 TRIM28Q13263 835 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 CTBP1Q13363 440 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 HABP2Q14520 560 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 UBE3CQ15386 1083 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 CTXN3Q4LDR2 81 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 FAM69AQ5T7M9 428 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 FYB2Q5VWT5 728 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 ISM2Q6H9L7 571 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 NAA16Q6N069 864 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 KANSL1Q7Z3B3 1105 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 MILR1Q7Z6M3 343 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SLC44A2Q8IWA5 706 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 DIS3L2Q8IYB7 885 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 Q8N1Y9 231 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 PQLC1Q8N2U9 271 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 CARNMT1Q8N4J0 409 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SRBD1Q8N5C6 995 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SLC15A4Q8N697 577 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 AVL9Q8NBF6 648 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMEM52Q8NDY8 209 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SCAMP5Q8TAC9 235 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 CPT1CQ8TCG5 803 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 STON2Q8WXE9 905 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SNX21Q969T3 373 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 JAKMIP2Q96AA8 810 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SH3KBP1Q96B97 665 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 EID2BQ96D98 161 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 HEXIM2Q96MH2 286 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 JMJD8Q96S16 334 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 TSPAN18Q96SJ8 248 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 XPO4Q9C0E2 1151 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 KIAA1683Q9H0B3 1180 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 CHST8Q9H2A9 424 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 MRPL46Q9H2W6 279 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 A1CFQ9NQ94 594 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 C1GALT1Q9NS00 363 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 SEPT11Q9NVA2 429 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 PLA2G2EQ9NZK7 142 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMOD4Q9NZQ9 345 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 MAGEL2Q9UJ55 1249 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 USP21Q9UK80 565 aa4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZMYND8Q9ULU4 1186 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 RUVBL1Q9Y265 456 aaKnown RBP4.04□□□□□ -1.76
HMGB1P22-201ENST00000505315 TDRD9Q8NDG6 1382 aaKnown RBP4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 RPTORQ8N122 1335 aa4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 CCDC78A2IDD5 438 aa4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 CLCA1A8K7I4 914 aa4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 TMEM233B4DJY2 109 aa4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 F8W735 103 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 FAM229AH3BQW9 127 aa4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 BEST1O76090 585 aa4.03□□□□□ -1.76
HMGB1P22-201ENST00000505315 SCGB1D1O95968 90 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms