RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 HIP1RO75146 1068 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 MOSPD3O75425 235 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 MATR3P43243 847 aaKnown RBP eCLIP15.56■□□□□ 0.08
VARS-228ENST00000495010 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.088e-10■■■■■ 31.1
VARS-228ENST00000495010 EPHB3P54753 998 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 EPHA5P54756 1037 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 MLLT6P55198 1093 aaPredicted RBP15.56■□□□□ 0.08
VARS-228ENST00000495010 YWHAHQ04917 246 aaPredicted RBP15.56■□□□□ 0.08
VARS-228ENST00000495010 PTGDRQ13258 359 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 CSRP2Q16527 193 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 PRR23CQ6ZRP0 262 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 CEP68Q76N32 757 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 USP37Q86T82 979 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 LONP2Q86WA8 852 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 OXCT2Q9BYC2 517 aaPredicted RBP15.56■□□□□ 0.08
VARS-228ENST00000495010 FOXP1Q9H334 677 aaPredicted RBP15.56■□□□□ 0.08
VARS-228ENST00000495010 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
VARS-228ENST00000495010 CACNA1BQ00975 2339 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 A0A1W2PRU2 124 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 SLC38A8A6NNN8 435 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 ALDH1A3P47895 512 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 NEK4P51957 841 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 DGKKQ5KSL6 1271 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 HEATR6Q6AI08 1181 aaKnown RBP15.55■□□□□ 0.08
VARS-228ENST00000495010 HAUS6Q7Z4H7 955 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 SHKBP1Q8TBC3 707 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 C17orf75Q9HAS0 396 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 ARHGAP28Q9P2N2 729 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 KCNG1Q9UIX4 513 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 YIPF1Q9Y548 306 aa15.55■□□□□ 0.08
VARS-228ENST00000495010 FRYLO94915 3013 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 E9PMD0 336 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 SLC16A4O15374 487 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 HRO43593 1189 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 PROZP22891 400 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 PDIA5Q14554 519 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 NOLC1Q14978 699 aaKnown RBP eCLIP15.54■□□□□ 0.08
VARS-228ENST00000495010 KRT79Q5XKE5 535 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 IL31Q6EBC2 164 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 DSTYKQ6XUX3 929 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 TAS1R3Q7RTX0 852 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 DDX1Q92499 740 aaKnown RBP15.54■□□□□ 0.08
VARS-228ENST00000495010 ZBTB45Q96K62 511 aaPredicted RBP15.54■□□□□ 0.08
VARS-228ENST00000495010 PGLYRP2Q96PD5 576 aa15.54■□□□□ 0.08
VARS-228ENST00000495010 RBM12Q9NTZ6 932 aaKnown RBP15.54■□□□□ 0.08
VARS-228ENST00000495010 SPECC1L-ADORA2AF8WAN1 911 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 ARNTLO00327 626 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 TOM1L1O75674 476 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 FGF19O95750 216 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 SOX9P48436 509 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 TRAPPC10P48553 1259 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 SMTNP53814 917 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 DMWDQ09019 674 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 DUSP4Q13115 394 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 SRSF5Q13243 272 aaKnown RBP15.53■□□□□ 0.08
VARS-228ENST00000495010 GAS6Q14393 721 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 SLC10A6Q3KNW5 377 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 ARHGAP29Q52LW3 1261 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 SEZ6Q53EL9 994 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 ARHGAP15Q53QZ3 475 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 RALGPS2Q86X27 583 aaPredicted RBP15.53■□□□□ 0.08
VARS-228ENST00000495010 GPIHBP1Q8IV16 184 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 ARID3BQ8IVW6 561 aaPredicted RBP15.53■□□□□ 0.08
VARS-228ENST00000495010 TTC8Q8TAM2 541 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 TUBGCP4Q9UGJ1 667 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 TIMM13Q9Y5L4 95 aaPredicted RBP15.53■□□□□ 0.08
VARS-228ENST00000495010 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.53■□□□□ 0.08
VARS-228ENST00000495010 COL4A2P08572 1712 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 CITO14578 2027 aa15.53■□□□□ 0.08
VARS-228ENST00000495010 F5P12259 2224 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 OR6C75A6NL08 312 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 SFI1A8K8P3 1242 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 M0QZQ0 153 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 CLDN3O15551 220 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 OAZ2O95190 189 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 PAPSS2O95340 614 aaPredicted RBP15.52■□□□□ 0.08
VARS-228ENST00000495010 OR4Q2P0C623 313 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 FCHO2Q0JRZ9 810 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 AASDHQ4L235 1098 aaPredicted RBP15.52■□□□□ 0.08
VARS-228ENST00000495010 RINT1Q6NUQ1 792 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 ARMCX5Q6P1M9 558 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 DAW1Q8N136 415 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 FAM184AQ8NB25 1140 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 BEST2Q8NFU1 509 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 RUSC1Q9BVN2 902 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 TIPINQ9BVW5 301 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 ATXN3LQ9H3M9 355 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 PLEKHA5Q9HAU0 1116 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 ASB3Q9Y575 518 aa15.52■□□□□ 0.08
VARS-228ENST00000495010 NCANO14594 1321 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 MYBPHLA2RUH7 354 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 K7ESF4 209 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 ABLIM1O14639 778 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 XPOTO43592 962 aaKnown RBP15.51■□□□□ 0.07
VARS-228ENST00000495010 GDF9O60383 454 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 CXCL8P10145 99 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 CTHP32929 405 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 PPP2R3AQ06190 1150 aa15.51■□□□□ 0.07
VARS-228ENST00000495010 SPAG1Q07617 926 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms