RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FSD2A1L4K1 749 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 TBX10O75333 385 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 CST3P01034 146 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-208ENST00000494334 KCNA5P22460 613 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 NDUFV1P49821 464 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 CLCN4P51793 760 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 RBP5P82980 135 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 TFF2Q03403 129 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 MRPL58Q14197 206 aaKnown RBP14.61□□□□□ -0.07
COL1A1-208ENST00000494334 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
COL1A1-208ENST00000494334 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 PDXDC1Q6P996 788 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 ANKS3Q6ZW76 656 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 PPFIBP1Q86W92 1011 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 GLYCTKQ8IVS8 523 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 FAM186BQ8IYM0 893 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 APPL2Q8NEU8 664 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 TMC2Q8TDI7 906 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 SLC22A17Q8WUG5 538 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 NELFBQ8WX92 580 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 DUSP9Q99956 384 aaKnown RBP14.61□□□□□ -0.07
COL1A1-208ENST00000494334 MKNK1Q9BUB5 465 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 THEGQ9P2T0 379 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 MTRRQ9UBK8 725 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 BARX2Q9UMQ3 279 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-208ENST00000494334 TIMM13Q9Y5L4 95 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-208ENST00000494334 BACE2Q9Y5Z0 518 aa14.61□□□□□ -0.07
COL1A1-208ENST00000494334 KPNA7A9QM74 516 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 H3BQ06 376 aaPredicted RBP14.6□□□□□ -0.07
COL1A1-208ENST00000494334 ADAM12O43184 909 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 TBC1D4O60343 1298 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 C4BPAP04003 597 aaKnown RBP14.6□□□□□ -0.07
COL1A1-208ENST00000494334 ADH1AP07327 375 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 EPCAMP16422 314 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 PNPLA4P41247 253 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 VAMP7P51809 220 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 STX17P56962 302 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 MCCD1P59942 119 aaPredicted RBP14.6□□□□□ -0.07
COL1A1-208ENST00000494334 CREMQ03060 361 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 PAK1Q13153 545 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 C1orf220Q5T0J3 134 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 TTI2Q6NXR4 508 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 FOXR2Q6PJQ5 311 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 RSPO2Q6UXX9 243 aaPredicted RBP14.6□□□□□ -0.07
COL1A1-208ENST00000494334 INTS8Q75QN2 995 aaKnown RBP14.6□□□□□ -0.07
COL1A1-208ENST00000494334 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 CASP10Q92851 521 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 ZNF560Q96MR9 790 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 CTNND2Q9UQB3 1225 aa14.6□□□□□ -0.07
COL1A1-208ENST00000494334 BICDL2A1A5D9 508 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 CYB561D2O14569 222 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 IKBKBO14920 756 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 EPB41P11171 864 aaKnown RBP14.59□□□□□ -0.07
COL1A1-208ENST00000494334 KRT13P13646 458 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 TYMPP19971 482 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 AP3M2P53677 418 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 NLRP12P59046 1061 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 BFSP1Q12934 665 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 SV2CQ496J9 727 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 LILRA6Q6PI73 481 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 RBM43Q6ZSC3 357 aaKnown RBP14.59□□□□□ -0.07
COL1A1-208ENST00000494334 PALB2Q86YC2 1186 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 MLKLQ8NB16 471 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 MSLNLQ96KJ4 702 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 R3HCC1Q9Y3T6 440 aaKnown RBP14.59□□□□□ -0.07
COL1A1-208ENST00000494334 CDY1Q9Y6F8 540 aa14.59□□□□□ -0.07
COL1A1-208ENST00000494334 H7C4K7 107 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 SLC16A3O15427 465 aaKnown RBP14.58□□□□□ -0.08
COL1A1-208ENST00000494334 TGM5O43548 720 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 OAZ2O95190 189 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 GLUD1P00367 558 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 C1RP00736 705 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 CYP11A1P05108 521 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 SRGAP2BP0DMP2 458 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 ODC1P11926 461 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 OR1D2P34982 312 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 YWHAHQ04917 246 aaPredicted RBP14.58□□□□□ -0.08
COL1A1-208ENST00000494334 ENPEPQ07075 957 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 MYO1EQ12965 1108 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 RAB33AQ14088 237 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 LEXMQ3ZCV2 418 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 CTXN3Q4LDR2 81 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 TDRD10Q5VZ19 366 aaKnown RBP14.58□□□□□ -0.08
COL1A1-208ENST00000494334 SLC8B1Q6J4K2 584 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 ZNF280DQ6N043 979 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 ANKRD54Q6NXT1 300 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 SYCE2Q6PIF2 218 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 SV2AQ7L0J3 742 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 FILIP1Q7Z7B0 1213 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 USP37Q86T82 979 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL1A1-208ENST00000494334 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.58□□□□□ -0.08
COL1A1-208ENST00000494334 ATXN2LQ8WWM7 1075 aaKnown RBP14.58□□□□□ -0.08
COL1A1-208ENST00000494334 HPDLQ96IR7 371 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 CEP63Q96MT8 703 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 MED15Q96RN5 788 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 FBXL5Q9UKA1 691 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 VWA8A3KMH1 1905 aa14.58□□□□□ -0.08
COL1A1-208ENST00000494334 ARHGEF37A1IGU5 675 aa14.57□□□□□ -0.08
COL1A1-208ENST00000494334 PHACTR2O75167 634 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms