RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CXorf38Q8TB03 319 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 PIK3R5Q8WYR1 880 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 MSLNLQ96KJ4 702 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 SUSD3Q96L08 255 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 ASB2Q96Q27 587 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
UBA3-211ENST00000493957 CLSTN3Q9BQT9 956 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 MTMR12Q9C0I1 747 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 RXFP1Q9HBX9 757 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 SIX4Q9UIU6 781 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 NUB1Q9Y5A7 615 aa12.61□□□□□ -0.39
UBA3-211ENST00000493957 TIMM13Q9Y5L4 95 aaPredicted RBP12.61□□□□□ -0.39
UBA3-211ENST00000493957 PTPRDP23468 1912 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 KIAA0391O15091 583 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 XPOTO43592 962 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 EXOC3O60645 756 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 SMC2O95347 1197 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 ITGB3P05106 788 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 IL9P15248 144 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBA3-211ENST00000493957 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 MRPS5P82675 430 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 ELAVL2Q12926 359 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 ANKRD54Q6NXT1 300 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 PALB2Q86YC2 1186 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 ELOA2Q8IYF1 753 aaPredicted RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 ATXN2LQ8WWM7 1075 aaKnown RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 ZNF516Q92618 1163 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 CCDC127Q96BQ5 260 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 EEF2KMTQ96G04 330 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 NECAB3Q96P71 396 aaPredicted RBP12.6□□□□□ -0.39
UBA3-211ENST00000493957 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 EMILIN2Q9BXX0 1053 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 RMND1Q9NWS8 449 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 CD207Q9UJ71 328 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 TRAF3IP3Q9Y228 551 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 MYH10P35580 1976 aa12.6□□□□□ -0.39
UBA3-211ENST00000493957 TRIM49BA6NDI0 452 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 NCK2O43639 380 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 WEE2P0C1S8 567 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 DLATP10515 647 aaKnown RBP12.59□□□□□ -0.39
UBA3-211ENST00000493957 BMP1P13497 986 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 POLR2BP30876 1174 aaKnown RBP12.59□□□□□ -0.39
UBA3-211ENST00000493957 LILRA4P59901 499 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 DLG4P78352 724 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
UBA3-211ENST00000493957 PSMD6Q15008 389 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 CEP135Q66GS9 1140 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 PTCRAQ6ISU1 281 aaPredicted RBP12.59□□□□□ -0.39
UBA3-211ENST00000493957 TMEM184AQ6ZMB5 413 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 SLC9A9Q8IVB4 645 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 GOLGA5Q8TBA6 731 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 MFSD14AQ96MC6 490 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 CGRRF1Q99675 332 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 INTS13Q9NVM9 706 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 FNIP2Q9P278 1114 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
UBA3-211ENST00000493957 MTRRQ9UBK8 725 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 HOOK1Q9UJC3 728 aaKnown RBP12.59□□□□□ -0.39
UBA3-211ENST00000493957 VCANP13611 3396 aa12.59□□□□□ -0.39
UBA3-211ENST00000493957 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
UBA3-211ENST00000493957 M0QZQ0 153 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 MBTPS2O43462 519 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 TGM5O43548 720 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 TRAPPC3O43617 180 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 CALUO43852 315 aaPredicted RBP12.58□□□□□ -0.4
UBA3-211ENST00000493957 AKAP3O75969 853 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 ADH1AP07327 375 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 TMEM191BP0C7N4 346 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 NR2F2P24468 414 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 MORC3Q14149 939 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 MRPL58Q14197 206 aaKnown RBP12.58□□□□□ -0.4
UBA3-211ENST00000493957 RARS2Q5T160 578 aaKnown RBP12.58□□□□□ -0.4
UBA3-211ENST00000493957 DSTYKQ6XUX3 929 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 WDR49Q8IV35 697 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 ADSSL1Q8N142 457 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 CSGALNACT2Q8N6G5 542 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 SMRP1Q8NCR6 262 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 CASP10Q92851 521 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 ELMO3Q96BJ8 720 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 BORCS6Q96GS4 357 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 SENP8Q96LD8 212 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 GBP4Q96PP9 640 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 S1PR5Q9H228 398 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 CLSTN2Q9H4D0 955 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 KIAA1586Q9HCI6 787 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 AGAP1Q9UPQ3 857 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 USP15Q9Y4E8 981 aaPredicted RBP12.58□□□□□ -0.4
UBA3-211ENST00000493957 CDY1Q9Y6F8 540 aa12.58□□□□□ -0.4
UBA3-211ENST00000493957 CUL9Q8IWT3 2517 aa12.57□□□□□ -0.4
UBA3-211ENST00000493957 OBSL1O75147 1896 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms