RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 C11orf96Q7Z7L8 435 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 ACRBPQ8NEB7 543 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 TMIEQ8NEW7 156 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 MARS2Q96GW9 593 aaKnown RBP4.88□□□□□ -1.63
CLK1-213ENST00000492793 SUCLG2Q96I99 432 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 RBM15Q96T37 977 aaKnown RBP eCLIP4.88□□□□□ -1.635e-8■■■□□ 15.1
CLK1-213ENST00000492793 MYD88Q99836 296 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 SSBP3Q9BWW4 388 aaPredicted RBP4.88□□□□□ -1.63
CLK1-213ENST00000492793 NAA15Q9BXJ9 866 aaKnown RBP4.88□□□□□ -1.63
CLK1-213ENST00000492793 RLIMQ9NVW2 624 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 TRPM5Q9NZQ8 1165 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 PHTF1Q9UMS5 762 aa4.88□□□□□ -1.63
CLK1-213ENST00000492793 MTO1Q9Y2Z2 717 aaKnown RBP4.88□□□□□ -1.63
CLK1-213ENST00000492793 ARID4BQ4LE39 1312 aaPredicted RBP4.88□□□□□ -1.63
CLK1-213ENST00000492793 BTN3A1O00481 513 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 TBX3O15119 743 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 UNC5CO95185 931 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 KIF20AO95235 890 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 ANXA1P04083 346 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 GRPP07492 148 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SPATA31D3P0C874 917 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 RABGGTBP53611 331 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 AK2P54819 239 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 MXRA7P84157 204 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 ZNF844Q08AG5 666 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SLC13A2Q13183 592 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 RRP1BQ14684 758 aaKnown RBP4.87□□□□□ -1.63
CLK1-213ENST00000492793 PRKD1Q15139 912 aaPredicted RBP4.87□□□□□ -1.63
CLK1-213ENST00000492793 CRB2Q5IJ48 1285 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 METTL24Q5JXM2 366 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 MAMDC4Q6UXC1 1216 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.87□□□□□ -1.63
CLK1-213ENST00000492793 Q6ZSN1 163 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SPATA31D4Q6ZUB0 917 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 TTLL10Q6ZVT0 673 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 USP37Q86T82 979 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SRLQ86TD4 932 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 PDSS2Q86YH6 399 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SYT12Q8IV01 421 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 LIX1LQ8IVB5 337 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 CCDC33Q8N5R6 958 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 PDPRQ8NCN5 879 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 NSUN7Q8NE18 718 aaKnown RBP4.87□□□□□ -1.63
CLK1-213ENST00000492793 FAM46DQ8NEK8 389 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 CPT1CQ8TCG5 803 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 NUP133Q8WUM0 1156 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 ANKS1AQ92625 1134 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SCAMP4Q969E2 229 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 MRGPRX1Q96LB2 322 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 C8orf49Q96NF6 230 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 KLHL32Q96NJ5 620 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 RPS6KC1Q96S38 1066 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 PSMD1Q99460 953 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SMOQ99835 787 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 ELAC2Q9BQ52 826 aaKnown RBP4.87□□□□□ -1.63
CLK1-213ENST00000492793 TLR10Q9BXR5 811 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 SIK2Q9H0K1 926 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 PNPLA8Q9NP80 782 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 AATKQ6ZMQ8 1374 aa4.87□□□□□ -1.63
CLK1-213ENST00000492793 KLRG2A4D1S0 409 aaPredicted RBP4.86□□□□□ -1.63
CLK1-213ENST00000492793 ISM1B1AKI9 464 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 POLRMTO00411 1230 aaKnown RBP4.86□□□□□ -1.63
CLK1-213ENST00000492793 MUSKO15146 869 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 FRS3O43559 492 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 FAM20BO75063 409 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 RPS6KA4O75676 772 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 FCER1AP12319 257 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 SLC5A1P13866 664 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 PIK3CBP42338 1070 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 SELENOPP49908 381 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 PIGFQ07326 219 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 RAB32Q13637 225 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 AMOTQ4VCS5 1084 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 C3orf38Q5JPI3 329 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 C1QL3Q5VWW1 255 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 LMBRD2Q68DH5 695 aaPredicted RBP4.86□□□□□ -1.63
CLK1-213ENST00000492793 FAM186BQ8IYM0 893 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 DNERQ8NFT8 737 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 OR56A1Q8NGH5 318 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 KBTBD7Q8WVZ9 684 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 DDX17Q92841 729 aaKnown RBP4.86□□□□□ -1.63
CLK1-213ENST00000492793 PHKBQ93100 1093 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 C20orf173Q96LM9 149 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 PNKPQ96T60 521 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 ZSWIM1Q9BR11 485 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 TRIM54Q9BYV2 358 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 TINAGL1Q9GZM7 467 aaPredicted RBP4.86□□□□□ -1.63
CLK1-213ENST00000492793 RNPEPQ9H4A4 650 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 SMPD4Q9NXE4 827 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 AGAP1Q9UPQ3 857 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 TMX2Q9Y320 296 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 XDHP47989 1333 aa4.86□□□□□ -1.63
CLK1-213ENST00000492793 POM121BA6NF01 834 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 PRSS29PA6NIE9 313 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 MYO1FO00160 1098 aa4.85□□□□□ -1.63
CLK1-213ENST00000492793 TOR1BO14657 336 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms