RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 PIK3CGP48736 1102 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 GNAI1P63096 354 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 TP53BP2Q13625 1128 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 CCDC157Q569K6 752 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 B3GNT9Q6UX72 402 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 Q6ZPA2 131 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 FAM90A1Q86YD7 464 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 PDSS2Q86YH6 399 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 VRK3Q8IV63 474 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 CHPFQ8IZ52 775 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 TMIEQ8NEW7 156 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 DIS3LQ8TF46 1054 aaKnown RBP4.04□□□□□ -1.76
RBM28-207ENST00000488249 RNF31Q96EP0 1072 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 FAM167AQ96KS9 214 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 LRGUKQ96M69 825 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 CGRRF1Q99675 332 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 PRRX2Q99811 253 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 C1orf43Q9BWL3 253 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 TLR10Q9BXR5 811 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 IMPG2Q9BZV3 1241 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 BRD9Q9H8M2 597 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 GALNT9Q9HCQ5 603 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 TMEM74BQ9NUR3 256 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 PNPOQ9NVS9 261 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 RLIMQ9NVW2 624 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 FEZ2Q9UHY8 353 aaPredicted RBP4.04□□□□□ -1.76
RBM28-207ENST00000488249 MTO1Q9Y2Z2 717 aaKnown RBP4.04□□□□□ -1.76
RBM28-207ENST00000488249 NR2E3Q9Y5X4 410 aa4.04□□□□□ -1.76
RBM28-207ENST00000488249 COL4A3Q01955 1670 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 LOC102724159A0A0B4J2E5 919 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 A0A0U1RQG5 324 aaPredicted RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 PIPSLA2A3N6 862 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 TMEM191CA6NGB0 347 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 PRSS29PA6NIE9 313 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 H3BUI4 141 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 SCGB1D2O95969 90 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 GJB1P08034 283 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 U2AF1L5P0DN76 240 aaPredicted RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 KRT4P19013 534 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 ZEB1P37275 1124 aaPredicted RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 IL12RB1P42701 662 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 NKX6-1P78426 367 aaPredicted RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 U2AF1Q01081 240 aaKnown RBP eCLIP4.03□□□□□ -1.76
RBM28-207ENST00000488249 TAP1Q03518 808 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 DPTQ07507 201 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 ZNF844Q08AG5 666 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 PPP2R5AQ15172 486 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 PWP2Q15269 919 aaKnown RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 LRRC41Q15345 812 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 CYP2A13Q16696 494 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 CXorf57Q6NSI4 855 aaKnown RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 NOL8Q76FK4 1167 aaKnown RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 EPM2AIP1Q7L775 607 aaPredicted RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 LDLRAD3Q86YD5 345 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 SH2D3CQ8N5H7 860 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 Q8NA96 180 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 SLC17A8Q8NDX2 589 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 SLC35G2Q8TBE7 412 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 SCAMP4Q969E2 229 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 FUBP1Q96AE4 644 aaKnown RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 NACC2Q96BF6 587 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 CDK5RAP3Q96JB5 506 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 CCDC136Q96JN2 1154 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 PKNOX2Q96KN3 472 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 MRPL46Q9H2W6 279 aaKnown RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 SLAMF7Q9NQ25 335 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 ANLNQ9NQW6 1124 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 VSX1Q9NZR4 365 aaPredicted RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 CFAP97Q9P2B7 532 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 TCEAL9Q9UHQ7 104 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 NOB1Q9ULX3 412 aaKnown RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 G3BP2Q9UN86 482 aaKnown RBP4.03□□□□□ -1.76
RBM28-207ENST00000488249 CDYLQ9Y232 598 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 STXBP5LQ9Y2K9 1186 aa4.03□□□□□ -1.76
RBM28-207ENST00000488249 MYADML2A6NDP7 307 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 ZNF785A8K8V0 405 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 E9PLN8 166 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 H3BML4 177 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 FOXN1O15353 648 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 B3GALT2O43825 422 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 ZFPL1O95159 310 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 MATN4O95460 622 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 EGR2P11161 476 aaPredicted RBP4.02□□□□□ -1.77
RBM28-207ENST00000488249 KCNA2P16389 499 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 PHKA1P46020 1223 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 TGFB2P61812 414 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 PSMC1P62191 440 aaKnown RBP4.02□□□□□ -1.77
RBM28-207ENST00000488249 SCAPQ12770 1279 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 PLS1Q14651 629 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 KIF22Q14807 665 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 FAM102BQ5T8I3 360 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 ABHD17BQ5VST6 288 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 LAIR1Q6GTX8 287 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 MRGPRGQ86SM5 289 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 GPR149Q86SP6 731 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 PPP1R3BQ86XI6 285 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 DENND1CQ8IV53 801 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 CFAP52Q8N1V2 620 aa4.02□□□□□ -1.77
RBM28-207ENST00000488249 LCORLQ8N3X6 602 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms