RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 METTL23Q86XA0 190 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 IRF2BP1Q8IU81 584 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 TMEM192Q8IY95 271 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 TTC39CQ8N584 583 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 PHOSPHO2Q8TCD6 241 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 POP1Q99575 1024 aaKnown RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 COLEC11Q9BWP8 271 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 LSM14BQ9BX40 385 aaKnown RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 NUCKS1Q9H1E3 243 aaKnown RBP7.48□□□□□ -1.21
UBR4-214ENST00000486515 STK39Q9UEW8 545 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 AGAP1Q9UPQ3 857 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 INSL6Q9Y581 213 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 SIP14410 1827 aa7.48□□□□□ -1.21
UBR4-214ENST00000486515 A0A1W2PQC6 194 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 CASTOR2A6NHX0 329 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 PMM2O15305 246 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 FAM189A1O60320 539 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 LPXNO60711 386 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 HUS1O60921 280 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 TADA2AO75478 443 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 OFD1O75665 1012 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 B3GAT3O94766 335 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 HLA-DRAP01903 254 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 FGFR1P11362 822 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 LAG3P18627 525 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 POLR2BP30876 1174 aaKnown RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 TAF6P49848 677 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 ZNF75DP51815 510 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 KRT17Q04695 432 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 ELAVL2Q12926 359 aaKnown RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 RAPGEF1Q13905 1077 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 NR1I3Q14994 352 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 WDR72Q3MJ13 1102 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 ZACNQ401N2 412 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBR4-214ENST00000486515 ASCL5Q7RTU5 278 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 RTN4RL1Q86UN2 441 aaPredicted RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 PPM1KQ8N3J5 372 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 LRRC52Q8N7C0 313 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 EHBP1Q8NDI1 1231 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 ZSWIM2Q8NEG5 633 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 TOP1MTQ969P6 601 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 HPDLQ96IR7 371 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 ZFP42Q96MM3 310 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 NAP1L5Q96NT1 182 aaPredicted RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 MED15Q96RN5 788 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 RAD9AQ99638 391 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 CRACR2AQ9BSW2 395 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 PBX4Q9BYU1 374 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 INTS2Q9H0H0 1204 aaKnown RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 FAM207AQ9NSI2 230 aaPredicted RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 IMPACTQ9P2X3 320 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 FAN1Q9Y2M0 1017 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 LUC7L2Q9Y383 392 aaKnown RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 RWDD3Q9Y3V2 267 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 PCDHB12Q9Y5F1 795 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 TRIP12Q14669 1992 aaPredicted RBP7.47□□□□□ -1.21
UBR4-214ENST00000486515 FAM208BQ5VWN6 2430 aa7.47□□□□□ -1.21
UBR4-214ENST00000486515 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 FSD2A1L4K1 749 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 PODXLO00592 558 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 C4BPAP04003 597 aaKnown RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 CDC25BP30305 580 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 PPM1AP35813 382 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 USP8P40818 1118 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 EPHB4P54760 987 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 GSDMDP57764 484 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 CLDN10P78369 228 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 PPP3CAQ08209 521 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 LRMPQ12912 555 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 GPNMBQ14956 572 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 CBWD6Q4V339 395 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 XKR4Q5GH76 650 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 CBWD3Q5JTY5 395 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 MIIPQ5JXC2 388 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 CBWD5Q5RIA9 395 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 TMEM240Q5SV17 173 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 TDRD10Q5VZ19 366 aaKnown RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 TRIM65Q6PJ69 517 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 DCLRE1AQ6PJP8 1040 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 ALKAL1Q6UXT8 129 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 VPS36Q86VN1 386 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 CNGA4Q8IV77 575 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 CMTR2Q8IYT2 770 aaKnown RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 FIBCD1Q8N539 461 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 C1orf127Q8N9H9 656 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 SPC24Q8NBT2 197 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 APPL2Q8NEU8 664 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 OR5B17Q8NGF7 314 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 CPLX3Q8WVH0 158 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 LINC01599Q8WXQ3 324 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 HLA-CQ95604 372 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 TRIM44Q96DX7 344 aaPredicted RBP7.46□□□□□ -1.22
UBR4-214ENST00000486515 BORCS6Q96GS4 357 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 TMEM169Q96HH4 297 aa7.46□□□□□ -1.22
UBR4-214ENST00000486515 FAXDC2Q96IV6 333 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms