RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 GNRHR2Q96P88 292 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 LRRC37BQ96QE4 947 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 UHRF1Q96T88 793 aaPredicted RBP5.4□□□□□ -1.54
VPS13A-211ENST00000484581 BRIP1Q9BX63 1249 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 STK33Q9BYT3 514 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 CPNE7Q9UBL6 633 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 SWAP70Q9UH65 585 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 TRPS1Q9UHF7 1281 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 CPA4Q9UI42 421 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 MAGEL2Q9UJ55 1249 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 SLC4A7Q9Y6M7 1214 aa5.4□□□□□ -1.54
VPS13A-211ENST00000484581 MYBBP1AQ9BQG0 1328 aaKnown RBP5.4□□□□□ -1.55
VPS13A-211ENST00000484581 GOLGA6L3A6NEY3 463 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 PRRT4C9JH25 899 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 H0Y858 1186 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 M0R3H8 397 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 AMY1AP04745 511 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 HNRNPLP14866 589 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS13A-211ENST00000484581 SMARCA1P28370 1054 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 PRDX5P30044 214 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 MAN1A1P33908 653 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 CRHR1P34998 444 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 DDIT3P35638 169 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 ADCY8P40145 1251 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 ARFIP2P53365 341 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 ATP8B2P98198 1209 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 PPFIA1Q13136 1202 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 FLYWCH1Q4VC44 716 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 KHDC1LQ5JSQ8 128 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 EMC10Q5UCC4 262 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 JAKMIP3Q5VZ66 844 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 TCTN3Q6NUS6 607 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 LVRNQ6Q4G3 990 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 FAM90A1Q86YD7 464 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 ZGPATQ8N5A5 531 aaKnown RBP5.39□□□□□ -1.55
VPS13A-211ENST00000484581 MSL3Q8N5Y2 521 aaKnown RBP5.39□□□□□ -1.55
VPS13A-211ENST00000484581 IL17REQ8NFR9 667 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 CCHCR1Q8TD31 782 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 TRAPPC12Q8WVT3 735 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 CASKIN2Q8WXE0 1202 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 UIMC1Q96RL1 719 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 TMEM120AQ9BXJ8 343 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 TRIM54Q9BYV2 358 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 DPH1Q9BZG8 443 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 SERHLQ9NQF3 203 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 MAP3K20Q9NYL2 800 aaKnown RBP5.39□□□□□ -1.55
VPS13A-211ENST00000484581 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.39□□□□□ -1.55
VPS13A-211ENST00000484581 MYO1AQ9UBC5 1043 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 PCDHA6Q9UN73 950 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 ZFR2Q9UPR6 939 aaKnown RBP5.39□□□□□ -1.55
VPS13A-211ENST00000484581 VWA7Q9Y334 891 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 CEP83Q9Y592 693 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 PAXBP1Q9Y5B6 917 aa5.39□□□□□ -1.55
VPS13A-211ENST00000484581 FOXS1O43638 330 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 PLA2G6O60733 806 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 GASTP01350 101 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 DDCP20711 480 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 EEF1GP26641 437 aaKnown RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 POLD1P28340 1107 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 PDIA3P30101 505 aaKnown RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 CSF2RBP32927 897 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 GUCY1A2P33402 732 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 ALDH9A1P49189 494 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 SESN2P58004 480 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 CTXN1P60606 82 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 HTRA4P83105 476 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 MTM1Q13496 603 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 USP10Q14694 798 aaKnown RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 ARL13BQ3SXY8 428 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 NRN1LQ496H8 165 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 FKBP15Q5T1M5 1219 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 TAX1BP1Q86VP1 789 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 PPP1R3BQ86XI6 285 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 ANKRD18AQ8IVF6 992 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 REXO1L1PQ8IX06 675 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 CACNA2D3Q8IZS8 1091 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 CELF5Q8N6W0 485 aaKnown RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 ATP11CQ8NB49 1132 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 MPP4Q96JB8 637 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 ADOQ96SZ5 270 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 RMDN3Q96TC7 470 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 CDC5LQ99459 802 aaKnown RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 PCED1AQ9H1Q7 454 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 MRPL46Q9H2W6 279 aaKnown RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 ZHX3Q9H4I2 956 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 TLR9Q9NR96 1032 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 TMEM140Q9NV12 185 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 STK32BQ9NY57 414 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 COL20A1Q9P218 1284 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 MED16Q9Y2X0 877 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 PCDHA1Q9Y5I3 950 aa5.38□□□□□ -1.55
VPS13A-211ENST00000484581 LRRFIP2Q9Y608 721 aaKnown RBP5.38□□□□□ -1.55
VPS13A-211ENST00000484581 F2RL2O00254 374 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 DAPK3O43293 454 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 VEGFAP15692 232 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 FGFR2P21802 821 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 MAPK9P45984 424 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 SOX8P57073 446 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 SIM2Q14190 667 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms