RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 TCEAL4Q96EI5 215 aa13.47□□□□□ -0.25
SBF1-208ENST00000477234 BRMS1Q9HCU9 246 aa13.47□□□□□ -0.25
SBF1-208ENST00000477234 RBM12Q9NTZ6 932 aaKnown RBP13.47□□□□□ -0.25
SBF1-208ENST00000477234 ANKEF1Q9NU02 776 aa13.47□□□□□ -0.25
SBF1-208ENST00000477234 EML1O00423 815 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 PTGESO14684 152 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 RECQL4O94761 1208 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 TDP2O95551 362 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 MYL4P12829 197 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.25
SBF1-208ENST00000477234 TKTP29401 623 aaKnown RBP13.46□□□□□ -0.25
SBF1-208ENST00000477234 ARL2P36404 184 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 VIPR2P41587 438 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 DPP6P42658 865 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 CREB5Q02930 508 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 LMAN2Q12907 356 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 PON2Q15165 354 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 MAPK6Q16659 721 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 UPP1Q16831 310 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 FBXO43Q4G163 708 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 ARHGAP15Q53QZ3 475 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 Q6ZS52 159 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
SBF1-208ENST00000477234 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 TMEM209Q96SK2 561 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 TOPORSQ9NS56 1045 aaPredicted RBP13.46□□□□□ -0.25
SBF1-208ENST00000477234 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
SBF1-208ENST00000477234 SNTG2Q9NY99 539 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 VPS54Q9P1Q0 977 aa13.46□□□□□ -0.25
SBF1-208ENST00000477234 AFF4Q9UHB7 1163 aaKnown RBP13.46□□□□□ -0.25
SBF1-208ENST00000477234 NUP205Q92621 2012 aa13.46□□□□□ -0.26
SBF1-208ENST00000477234 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.26
SBF1-208ENST00000477234 SPEGQ15772 3267 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 BCLAF3A2AJT9 711 aaKnown RBP13.45□□□□□ -0.26
SBF1-208ENST00000477234 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
SBF1-208ENST00000477234 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
SBF1-208ENST00000477234 PRPF4BQ13523 1007 aaKnown RBP13.45□□□□□ -0.26
SBF1-208ENST00000477234 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
SBF1-208ENST00000477234 HNRNPDQ14103 355 aaKnown RBP13.45□□□□□ -0.26
SBF1-208ENST00000477234 NAB2Q15742 525 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 ITPRIPL2Q3MIP1 535 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 TPH2Q8IWU9 490 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 BLIDQ8IZY5 108 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 DAGLBQ8NCG7 672 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 MCPH1Q8NEM0 835 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 FBXO18Q8NFZ0 1043 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 ZSWIM3Q96MP5 696 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
SBF1-208ENST00000477234 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 ASB3Q9Y575 518 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.45□□□□□ -0.26
SBF1-208ENST00000477234 ARID2Q68CP9 1835 aa13.45□□□□□ -0.26
SBF1-208ENST00000477234 SETXQ7Z333 2677 aaKnown RBP13.44□□□□□ -0.26
SBF1-208ENST00000477234 B4GALT5O43286 388 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 EDIL3O43854 480 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 LYPLA2O95372 231 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 GLRA2P23416 452 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 WEE1P30291 646 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 CCR2P41597 374 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 CLCNKBP51801 687 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 YARSP54577 528 aaKnown RBP13.44□□□□□ -0.26
SBF1-208ENST00000477234 EPHB3P54753 998 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 TWF1Q12792 350 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 ARID3BQ8IVW6 561 aaPredicted RBP13.44□□□□□ -0.26
SBF1-208ENST00000477234 ACDQ96AP0 544 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 FZD8Q9H461 694 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 XPNPEP1Q9NQW7 623 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 EBF1Q9UH73 591 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 NUB1Q9Y5A7 615 aa13.44□□□□□ -0.26
SBF1-208ENST00000477234 ASCC3Q8N3C0 2202 aaKnown RBP13.43□□□□□ -0.26
SBF1-208ENST00000477234 CCDC194A0A1B0GVG4 234 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 LNP1A1A4G5 178 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 ADAMTS3O15072 1205 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 EXTL3O43909 919 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
SBF1-208ENST00000477234 MARCKSP29966 332 aaPredicted RBP13.43□□□□□ -0.26
SBF1-208ENST00000477234 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
SBF1-208ENST00000477234 ARPP19P56211 112 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 PPP2R5AQ15172 486 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 TEAD2Q15562 447 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 CTXN3Q4LDR2 81 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 USP39Q53GS9 565 aaKnown RBP13.43□□□□□ -0.26
SBF1-208ENST00000477234 ITIH5Q86UX2 942 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 CDR2LQ86X02 465 aaPredicted RBP13.43□□□□□ -0.26
SBF1-208ENST00000477234 ASAP3Q8TDY4 903 aa13.43□□□□□ -0.26
SBF1-208ENST00000477234 PPP1R10Q96QC0 940 aaKnown RBP13.43□□□□□ -0.26
SBF1-208ENST00000477234 ACACAQ13085 2346 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 ACKR2O00590 384 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 GIPC1O14908 333 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 APBB3O95704 486 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 DRD1P21728 446 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 GBP1P32455 592 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 ALDH1A3P47895 512 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 EFNA5P52803 228 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 CYP4A11Q02928 519 aa13.42□□□□□ -0.26
SBF1-208ENST00000477234 CDCA2Q69YH5 1023 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms