RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 AMPD3Q01432 767 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 POU5F1Q01860 360 aaKnown RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 PABPC1LQ4VXU2 614 aaKnown RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 C9orf57Q5W0N0 161 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 RESP18Q5W5W9 173 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 TPGS2Q68CL5 300 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 CRELD2Q6UXH1 353 aaPredicted RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 STXBP4Q6ZWJ1 553 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 USP37Q86T82 979 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 BRSK2Q8IWQ3 736 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 EFCAB13Q8IY85 973 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 GLIS3Q8NEA6 775 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 HPS3Q969F9 1004 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 FAM122AQ96E09 287 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 TMEM206Q9H813 350 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 CYP4F11Q9HBI6 524 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 HCFC1R1Q9NWW0 138 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 RBAKQ9NYW8 714 aaPredicted RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 PCDHA7Q9UN72 937 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 TIMM13Q9Y5L4 95 aaPredicted RBP11.02□□□□□ -0.65
SF3A3-204ENST00000462258 INSL5Q9Y5Q6 135 aa11.02□□□□□ -0.65
SF3A3-204ENST00000462258 ARHGEF37A1IGU5 675 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 PIRO00625 290 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 LAMP2P13473 410 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 TYMPP19971 482 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 PAX3P23760 479 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 TAF6P49848 677 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
SF3A3-204ENST00000462258 LILRA4P59901 499 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 HTR4Q13639 388 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 FAM26FQ5R3K3 315 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 OVOS1Q6IE37 1185 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 ARMCX5Q6P1M9 558 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 CNNM4Q6P4Q7 775 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 NT5DC4Q86YG4 428 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 TCEAL8Q8IYN2 117 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 ZSWIM2Q8NEG5 633 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 NOC3LQ8WTT2 800 aaKnown RBP11.01□□□□□ -0.65
SF3A3-204ENST00000462258 RSAD2Q8WXG1 361 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 ZNF560Q96MR9 790 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 PYM1Q9BRP8 204 aaKnown RBP11.01□□□□□ -0.65
SF3A3-204ENST00000462258 OXCT2Q9BYC2 517 aaPredicted RBP11.01□□□□□ -0.65
SF3A3-204ENST00000462258 KCNH6Q9H252 994 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 DPP3Q9NY33 737 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 DNMT3BQ9UBC3 853 aaKnown RBP11.01□□□□□ -0.65
SF3A3-204ENST00000462258 AFF4Q9UHB7 1163 aaKnown RBP11.01□□□□□ -0.65
SF3A3-204ENST00000462258 CDH7Q9ULB5 785 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 YIPF1Q9Y548 306 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 ZFP37Q9Y6Q3 630 aaPredicted RBP11.01□□□□□ -0.65
SF3A3-204ENST00000462258 NUMBLQ9Y6R0 609 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 UBE4BO95155 1302 aa11.01□□□□□ -0.65
SF3A3-204ENST00000462258 ANO9A1A5B4 782 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 GOLGA8IPA6NC78 632 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 OR6C75A6NL08 312 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 GOLGA8JA6NMD2 632 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 TULP1O00294 542 aaPredicted RBP11□□□□□ -0.65
SF3A3-204ENST00000462258 SPTLC1O15269 473 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 EIF3DO15371 548 aaKnown RBP eCLIP11□□□□□ -0.65
SF3A3-204ENST00000462258 NARSO43776 548 aaKnown RBP11□□□□□ -0.65
SF3A3-204ENST00000462258 EXTL3O43909 919 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 OAZ2O95190 189 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 SEC24AO95486 1093 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 LDHAP00338 332 aaKnown RBP11□□□□□ -0.65
SF3A3-204ENST00000462258 RHOP08100 348 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 OR4Q2P0C623 313 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 CASP1P29466 404 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 WNT7BP56706 349 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 KRT85P78386 507 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 ADCY1Q08828 1119 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 RNF19BQ6ZMZ0 732 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 UNC13DQ70J99 1090 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 NPAS3Q8IXF0 933 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 GPD1LQ8N335 351 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 ITFG1Q8TB96 612 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 ING5Q8WYH8 240 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 FGF13Q92913 245 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 NXPE3Q969Y0 559 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 SENP8Q96LD8 212 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 PGLYRP2Q96PD5 576 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 C7orf25Q9BPX7 421 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 BLZF1Q9H2G9 400 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 MFSD1Q9H3U5 465 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 PCIF1Q9H4Z3 704 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 RCOR1Q9UKL0 485 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 FBXL21Q9UKT6 434 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 KCNH3Q9ULD8 1083 aa11□□□□□ -0.65
SF3A3-204ENST00000462258 NUP210Q8TEM1 1887 aaPredicted RBP11□□□□□ -0.65
SF3A3-204ENST00000462258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.99□□□□□ -0.65
SF3A3-204ENST00000462258 ANHXE9PGG2 379 aa10.99□□□□□ -0.65
SF3A3-204ENST00000462258 KIAA0391O15091 583 aaKnown RBP10.99□□□□□ -0.65
SF3A3-204ENST00000462258 ITGB3P05106 788 aa10.99□□□□□ -0.65
SF3A3-204ENST00000462258 CYP11A1P05108 521 aa10.99□□□□□ -0.65
SF3A3-204ENST00000462258 CFHP08603 1231 aa10.99□□□□□ -0.65
SF3A3-204ENST00000462258 SRFP11831 508 aa10.99□□□□□ -0.65
SF3A3-204ENST00000462258 POLR2BP30876 1174 aaKnown RBP10.99□□□□□ -0.65
SF3A3-204ENST00000462258 TFAMQ00059 246 aaKnown RBP10.99□□□□□ -0.65
SF3A3-204ENST00000462258 EHHADHQ08426 723 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms