RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TBC1D23Q9NUY8 699 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 MBD1Q9UIS9 605 aaPredicted RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 ANGEL1Q9UNK9 670 aaKnown RBP4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 AGAP1Q9UPQ3 857 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 TBC1D30Q9Y2I9 924 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 PNPLA7Q6ZV29 1317 aa4.96□□□□□ -1.62
HMGN3P1-201ENST00000453847 TCRBV7S2A1N4TA0A589 114 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 PODXLO00592 558 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 PIP5K1BO14986 540 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 MTSS1O43312 755 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 THAP12O43422 761 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 KCNQ3O43525 872 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 CD4P01730 458 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 GJB1P08034 283 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 ITGA5P08648 1049 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 IL2RBP14784 551 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 BTF3P20290 206 aaKnown RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 CASRP41180 1078 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 ETV4P43268 484 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 CARSP49589 748 aaKnown RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 CREMQ03060 361 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 DUSP8Q13202 625 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 TBR1Q16650 682 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 FAM110CQ1W6H9 321 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 FAM47AQ5JRC9 791 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 DCAF12L1Q5VU92 463 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 BORAQ6PGQ7 559 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 KIAA0408Q6ZU52 694 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 SEM1Q6ZVN7 128 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 RNF44Q7L0R7 432 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 DNAJC5GQ8N7S2 189 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 TTLL6Q8N841 843 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 PCSK9Q8NBP7 692 aaKnown RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 SLC35B2Q8TB61 432 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 OTUD7AQ8TE49 926 aaPredicted RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 LRRC46Q96FV0 321 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 NDC1Q9BTX1 674 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 INO80BQ9C086 356 aaPredicted RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 MLXIPQ9HAP2 919 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 TMEM8AQ9HCN3 771 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 MRPS18AQ9NVS2 196 aaKnown RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 RGL1Q9NZL6 768 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 STK17AQ9UEE5 414 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 SRP68Q9UHB9 627 aaKnown RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 ITGB1BP2Q9UKP3 347 aa4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 RBM8AQ9Y5S9 174 aaKnown RBP4.95□□□□□ -1.62
HMGN3P1-201ENST00000453847 A0A0B4J269 797 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 FAM155BO75949 473 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 TOX4O94842 621 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 UNC5CO95185 931 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 WNT11O96014 354 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 PLA2G1BP04054 148 aaKnown RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 CKBP12277 381 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 GYPEP15421 78 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 ITGB5P18084 799 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 CNTFP26441 200 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 KCNJ5P48544 419 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 SLC11A2P49281 568 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 MRE11P49959 708 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 ADCY7P51828 1080 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 PTTG1IPP53801 180 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 EPHB3P54753 998 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 UCP3P55916 312 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 ATP2C1P98194 919 aaPredicted RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 TARBP2Q15633 366 aaKnown RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 TIGD6Q17RP2 521 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 SULT6B1Q6IMI4 303 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 TRMT10BQ6PF06 316 aaKnown RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF605Q86T29 641 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 TBC1D1Q86TI0 1168 aaPredicted RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 HERC6Q8IVU3 1022 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 SLC15A4Q8N697 577 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 SLC30A5Q8TAD4 765 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF384Q8TF68 577 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 UBE2Q2Q8WVN8 375 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 USP13Q92995 863 aaPredicted RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 TRIM63Q969Q1 353 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 EID2BQ96D98 161 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZSCAN31Q96LW9 406 aaPredicted RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 FAM167BQ9BTA0 163 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 KIAA1683Q9H0B3 1180 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 OSBPL5Q9H0X9 879 aaPredicted RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 PCDH18Q9HCL0 1135 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 A1CFQ9NQ94 594 aaKnown RBP4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 NECTIN3Q9NQS3 549 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 MID2Q9UJV3 735 aa4.94□□□□□ -1.62
HMGN3P1-201ENST00000453847 MBD3L4A6NDZ8 208 aaPredicted RBP4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 MBD3L3A6NE82 208 aaPredicted RBP4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 CXorf49A8MYA2 514 aaPredicted RBP4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 RNASEH2AO75792 299 aaKnown RBP4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 HMGCRP04035 888 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 GLI1P08151 1106 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF888P0CJ79 500 aaPredicted RBP4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 ZNF28P17035 718 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 CAPN3P20807 821 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 CASP2P42575 452 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 EIF5P55010 431 aaKnown RBP4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 HGFACQ04756 655 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 DUSP2Q05923 314 aa4.93□□□□□ -1.62
HMGN3P1-201ENST00000453847 CNGB1Q14028 1251 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms