RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CES5AQ6NT32 575 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 SLC22A17Q8WUG5 538 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 FAM122AQ96E09 287 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 APOL5Q9BWW9 433 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 KCTD10Q9H3F6 313 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 DZANK1Q9NVP4 752 aa19.12■□□□□ 0.65
CCDC188-201ENST00000439765 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.12■□□□□ 0.65
CCDC188-201ENST00000439765 ZNF233A6NK53 670 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 BIN1O00499 593 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 FGFR3P22607 806 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 CLCN4P51793 760 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 SNRPFP62306 86 aaKnown RBP19.11■□□□□ 0.65
CCDC188-201ENST00000439765 C9orf57Q5W0N0 161 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 LMBRD2Q68DH5 695 aaPredicted RBP19.11■□□□□ 0.65
CCDC188-201ENST00000439765 SASS6Q6UVJ0 657 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 PPFIBP1Q86W92 1011 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 TRIML1Q8N9V2 468 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 XXYLT1Q8NBI6 393 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 GOLGA5Q8TBA6 731 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 PIK3R5Q8WYR1 880 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 ANP32EQ9BTT0 268 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.11■□□□□ 0.65
CCDC188-201ENST00000439765 DPP3Q9NY33 737 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 CGNQ9P2M7 1197 aaKnown RBP19.11■□□□□ 0.65
CCDC188-201ENST00000439765 DOCK6Q96HP0 2047 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 PTPRJQ12913 1337 aa19.11■□□□□ 0.65
CCDC188-201ENST00000439765 MORC3Q14149 939 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 ISM2Q6H9L7 571 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 C12orf56Q8IXR9 622 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 LNX1Q8TBB1 728 aaPredicted RBP19.1■□□□□ 0.65
CCDC188-201ENST00000439765 FBXL18Q96ME1 805 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 MTMR12Q9C0I1 747 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 RXFP1Q9HBX9 757 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 KIAA1586Q9HCI6 787 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 CACNA1HO95180 2353 aa19.1■□□□□ 0.65
CCDC188-201ENST00000439765 SPDYE4A6NLX3 237 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 EXOC3O60645 756 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 KIF20AO95235 890 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 MTHFRP42898 656 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 NLRP12P59046 1061 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 CREMQ03060 361 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 HFE2Q6ZVN8 426 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 BMP8AQ7Z5Y6 402 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 PALB2Q86YC2 1186 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 SUSD3Q96L08 255 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 POMKQ9H5K3 350 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 CDH22Q9UJ99 828 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 PDXKO00764 312 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 ADAM12O43184 909 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 GLUD1P00367 558 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 NR3C1P04150 777 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 TMEM191BP0C7N4 346 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 BMP6P22004 513 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 ZXDAP98168 799 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 CYP24A1Q07973 514 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 VARS2Q5ST30 1063 aaKnown RBP19.09■□□□□ 0.65
CCDC188-201ENST00000439765 ZNF658Q5TYW1 1059 aaPredicted RBP19.09■□□□□ 0.65
CCDC188-201ENST00000439765 TRIM67Q6ZTA4 783 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 NT5DC4Q86YG4 428 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 GPR65Q8IYL9 337 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 GUF1Q8N442 669 aaKnown RBP19.09■□□□□ 0.65
CCDC188-201ENST00000439765 CCDC127Q96BQ5 260 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 FUCA2Q9BTY2 467 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 GTPBP4Q9BZE4 634 aaKnown RBP19.09■□□□□ 0.65
CCDC188-201ENST00000439765 MAN1C1Q9NR34 630 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 FNIP2Q9P278 1114 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 MTRRQ9UBK8 725 aa19.09■□□□□ 0.65
CCDC188-201ENST00000439765 ANO9A1A5B4 782 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 SYN3O14994 580 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 ITGB3P05106 788 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 SPATA31D3P0C874 917 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 DLATP10515 647 aaKnown RBP19.08■□□□□ 0.64
CCDC188-201ENST00000439765 POLR2BP30876 1174 aaKnown RBP19.08■□□□□ 0.64
CCDC188-201ENST00000439765 AARSP49588 968 aaKnown RBP eCLIP19.08■□□□□ 0.64
CCDC188-201ENST00000439765 LILRA4P59901 499 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 ZNF445P59923 1031 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 TYRO3Q06418 890 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 PDXDC1Q6P996 788 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 SPATA31D4Q6ZUB0 917 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 C12orf76Q8N812 135 aaPredicted RBP19.08■□□□□ 0.64
CCDC188-201ENST00000439765 C1orf127Q8N9H9 656 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 RIPOR3Q96MK2 946 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 CLSTN3Q9BQT9 956 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 KCNH6Q9H252 994 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 NR2E1Q9Y466 385 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 CDY1Q9Y6F8 540 aa19.08■□□□□ 0.64
CCDC188-201ENST00000439765 PIRO00625 290 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 SPTLC1O15269 473 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 CALUO43852 315 aaPredicted RBP19.07■□□□□ 0.64
CCDC188-201ENST00000439765 CCDC192P0DO97 292 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 PTPN21Q16825 1174 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 RARS2Q5T160 578 aaKnown RBP19.07■□□□□ 0.64
CCDC188-201ENST00000439765 CEP135Q66GS9 1140 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 LRSAM1Q6UWE0 723 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 RSPO2Q6UXX9 243 aaPredicted RBP19.07■□□□□ 0.64
CCDC188-201ENST00000439765 DSTYKQ6XUX3 929 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 ANKS3Q6ZW76 656 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 OR5B17Q8NGF7 314 aa19.07■□□□□ 0.64
CCDC188-201ENST00000439765 CACTINQ8WUQ7 758 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms