RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 SMRP1Q8NCR6 262 aa25.35■■□□□ 1.65
PDGFA-205ENST00000426681 CCDC127Q96BQ5 260 aa25.35■■□□□ 1.65
PDGFA-205ENST00000426681 CLSTN2Q9H4D0 955 aa25.35■■□□□ 1.65
PDGFA-205ENST00000426681 FRMD4BQ9Y2L6 1034 aa25.35■■□□□ 1.65
PDGFA-205ENST00000426681 SPTBN5Q9NRC6 3674 aaKnown RBP25.34■■□□□ 1.65
PDGFA-205ENST00000426681 H7C4K7 107 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 TBC1D4O60343 1298 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 OAZ2O95190 189 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 GLUD1P00367 558 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 TNNC2P02585 160 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 ITGB3P05106 788 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 TNNI1P19237 187 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 TYMPP19971 482 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 POLR2BP30876 1174 aaKnown RBP25.34■■□□□ 1.65
PDGFA-205ENST00000426681 RBP5P82980 135 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 ADAM9Q13443 819 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 LMBRD2Q68DH5 695 aaPredicted RBP25.34■■□□□ 1.65
PDGFA-205ENST00000426681 ISM2Q6H9L7 571 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 SYCE2Q6PIF2 218 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 DSTYKQ6XUX3 929 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 LRRC52Q8N7C0 313 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 TRIML1Q8N9V2 468 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 PARD3BQ8TEW8 1205 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 HDAC7Q8WUI4 952 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 BORCS6Q96GS4 357 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 DHTKD1Q96HY7 919 aaPredicted RBP25.34■■□□□ 1.65
PDGFA-205ENST00000426681 FAM84AQ96KN4 292 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 SENP8Q96LD8 212 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 ZNF560Q96MR9 790 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 POP1Q99575 1024 aaKnown RBP25.34■■□□□ 1.65
PDGFA-205ENST00000426681 SIX4Q9UIU6 781 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 AGAP1Q9UPQ3 857 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 PLXNA3P51805 1871 aa25.34■■□□□ 1.65
PDGFA-205ENST00000426681 ARHGEF37A1IGU5 675 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 GRXCR2A6NFK2 248 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 SMAD4Q13485 552 aaKnown RBP25.33■■□□□ 1.65
PDGFA-205ENST00000426681 STIM1Q13586 685 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 RAB33AQ14088 237 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 SV2CQ496J9 727 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 CEP135Q66GS9 1140 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 PTCRAQ6ISU1 281 aaPredicted RBP25.33■■□□□ 1.65
PDGFA-205ENST00000426681 SLC8B1Q6J4K2 584 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 PALB2Q86YC2 1186 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 PLEKHO2Q8TD55 490 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 TMC2Q8TDI7 906 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 S1PR5Q9H228 398 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 DPP7Q9UHL4 492 aa25.33■■□□□ 1.65
PDGFA-205ENST00000426681 MTCL1Q9Y4B5 1905 aaKnown RBP25.33■■□□□ 1.65
PDGFA-205ENST00000426681 KPNA7A9QM74 516 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 PSMA7O14818 248 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 ADAM12O43184 909 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 TGM5O43548 720 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 AKAP3O75969 853 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 OR1D2P34982 312 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 AP3M2P53677 418 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 MCCD1P59942 119 aaPredicted RBP25.32■■□□□ 1.64
PDGFA-205ENST00000426681 LRRC63Q05C16 580 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 ENPEPQ07075 957 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 RSPO2Q6UXX9 243 aaPredicted RBP25.32■■□□□ 1.64
PDGFA-205ENST00000426681 TRAPPC11Q7Z392 1133 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 ZNF516Q92618 1163 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 TSG101Q99816 390 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 OXCT2Q9BYC2 517 aaPredicted RBP25.32■■□□□ 1.64
PDGFA-205ENST00000426681 PLEKHA4Q9H4M7 779 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 FAM50BQ9Y247 325 aa25.32■■□□□ 1.64
PDGFA-205ENST00000426681 PPP1R3GB7ZBB8 358 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 BIN1O00499 593 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 MBTPS2O43462 519 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 CYP11A1P05108 521 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 ODC1P11926 461 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 CD44P16070 742 aaKnown RBP25.31■■□□□ 1.64
PDGFA-205ENST00000426681 PSMC2P35998 433 aaKnown RBP25.31■■□□□ 1.64
PDGFA-205ENST00000426681 YWHAHQ04917 246 aaPredicted RBP25.31■■□□□ 1.64
PDGFA-205ENST00000426681 CLUL1Q15846 466 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 ANKRD40Q6AI12 368 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 SCARA3Q6AZY7 606 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 ELMSAN1Q6PJG2 1045 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 FOXR2Q6PJQ5 311 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 GLYCTKQ8IVS8 523 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 ZC3H3Q8IXZ2 948 aaKnown RBP25.31■■□□□ 1.64
PDGFA-205ENST00000426681 MKNK1Q9BUB5 465 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 DSEQ9UL01 958 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 CDY1Q9Y6F8 540 aa25.31■■□□□ 1.64
PDGFA-205ENST00000426681 LRRIQ3A6PVS8 624 aaPredicted RBP25.3■■□□□ 1.64
PDGFA-205ENST00000426681 KRT19P08727 400 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 CCNE1P24864 410 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 PMS1P54277 932 aaKnown RBP25.3■■□□□ 1.64
PDGFA-205ENST00000426681 CTXN3Q4LDR2 81 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 ZNF280DQ6N043 979 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 INTS8Q75QN2 995 aaKnown RBP25.3■■□□□ 1.64
PDGFA-205ENST00000426681 USP37Q86T82 979 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 MAN1C1Q9NR34 630 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 GDAP2Q9NXN4 497 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 FBXL5Q9UKA1 691 aa25.3■■□□□ 1.64
PDGFA-205ENST00000426681 TIMM13Q9Y5L4 95 aaPredicted RBP25.3■■□□□ 1.64
PDGFA-205ENST00000426681 CYB561D2O14569 222 aa25.29■■□□□ 1.64
PDGFA-205ENST00000426681 IKBKBO14920 756 aa25.29■■□□□ 1.64
PDGFA-205ENST00000426681 CETN3O15182 167 aa25.29■■□□□ 1.64
PDGFA-205ENST00000426681 PAPLNO95428 1278 aa25.29■■□□□ 1.64
PDGFA-205ENST00000426681 FKBP3Q00688 224 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms