RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZEB1P37275 1124 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 PSMC1P62191 440 aaKnown RBP5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 MC2RQ01718 297 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 PPP2R5AQ15172 486 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 GEN1Q17RS7 908 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 FAM102BQ5T8I3 360 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 GPR149Q86SP6 731 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 RUNDC1Q96C34 613 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 IMPG2Q9BZV3 1241 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 REXO4Q9GZR2 422 aaKnown RBP5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 NMRK2Q9NPI5 230 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 CTTNBP2NLQ9P2B4 639 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 KCNE5Q9UJ90 142 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 PCDHA1Q9Y5I3 950 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 COL4A3Q01955 1670 aa5.77□□□□□ -1.49
HMGB1P49-201ENST00000418882 PPM1GO15355 546 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 TSPAN6O43657 245 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 GJB1P08034 283 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 SMARCA1P28370 1054 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 PIK3CGP48736 1102 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 GUCY1B3Q02153 619 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 CRB2Q5IJ48 1285 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 LY6G5CQ5SRR4 150 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 THEMIS2Q5TEJ8 643 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 ULK2Q8IYT8 1036 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 CHPFQ8IZ52 775 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 SLC17A8Q8NDX2 589 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 BEND2Q8NDZ0 799 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 C1GALT1C1Q96EU7 318 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 SORCS2Q96PQ0 1159 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 PNKPQ96T60 521 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 ARMT1Q9H993 441 aa5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 SIDT1Q9NXL6 827 aaKnown RBP5.76□□□□□ -1.49
HMGB1P49-201ENST00000418882 A6NNZ2 444 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 ZNF785A8K8V0 405 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 EGR2P11161 476 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 HSPA6P17066 643 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 EXOSC9Q06265 439 aaKnown RBP5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 KIF22Q14807 665 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 Q6YL49 198 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 OVCH2Q7RTZ1 564 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 CFAP52Q8N1V2 620 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 AMER2Q8N7J2 671 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 KLHDC4Q8TBB5 520 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 FBXO41Q8TF61 875 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 TNPO1Q92973 898 aaKnown RBP5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 FUBP1Q96AE4 644 aaKnown RBP5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 SLC35A4Q96G79 324 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 WDCPQ9H6R7 721 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 UNKLQ9H9P5 680 aaKnown RBP5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 KMT5AQ9NQR1 393 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 MAN1C1Q9NR34 630 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 TMEM74BQ9NUR3 256 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 PNPOQ9NVS9 261 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 SYBUQ9NX95 663 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 STAP2Q9UGK3 403 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 SRRDQ9UH36 339 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 FEZ2Q9UHY8 353 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 STXBP5LQ9Y2K9 1186 aa5.75□□□□□ -1.49
HMGB1P49-201ENST00000418882 H3BUI4 141 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 B3GALT2O43825 422 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 UBXN7O94888 489 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 SUN1O94901 812 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 ARIH2O95376 493 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 FTH1P19P0C7X4 201 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 HDCP19113 662 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 HTR1BP28222 390 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 ZNF135P52742 658 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 GTF2H3Q13889 308 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 PTPAQ15257 358 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 NXNQ6DKJ4 435 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 CXorf57Q6NSI4 855 aaKnown RBP5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 USP51Q70EK9 711 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 TMPRSS9Q7Z410 1059 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 DENND1CQ8IV53 801 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 TCEAL8Q8IYN2 117 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 MAGEB6Q8N7X4 407 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 BOD1Q96IK1 185 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 IKZF4Q9H2S9 585 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 BRD9Q9H8M2 597 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 GPR35Q9HC97 309 aa5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 MTO1Q9Y2Z2 717 aaKnown RBP5.74□□□□□ -1.49
HMGB1P49-201ENST00000418882 PIPSLA2A3N6 862 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 H3BML4 177 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 HLA-DOAP06340 250 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 ITGAMP11215 1152 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 PROZP22891 400 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 TOB1P50616 345 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 VAV2P52735 878 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 RAB1AP62820 205 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 COL10A1Q03692 680 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 SWSAP1Q6NVH7 229 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 TAPT1Q6NXT6 567 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 PDSS2Q86YH6 399 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 CAMKK1Q8N5S9 505 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms