RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 FAM193BQ96PV7 902 aaPredicted RBP11.75□□□□□ -0.53
BRCC3-204ENST00000369462 STK33Q9BYT3 514 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 NIF3L1Q9GZT8 377 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 CXXC1Q9P0U4 656 aaPredicted RBP11.75□□□□□ -0.53
BRCC3-204ENST00000369462 PODXLO00592 558 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 B4GALT3O60512 393 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 DGKIO75912 1065 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 ARID5AQ03989 594 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 CUL2Q13617 745 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 VRTNQ9H8Y1 702 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 ABHD10Q9NUJ1 306 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 POLIQ9UNA4 740 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 SNX9Q9Y5X1 595 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 SCN1AP35498 2009 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 PDCD11Q14690 1871 aaKnown RBP11.75□□□□□ -0.53
BRCC3-204ENST00000369462 FOXN3O00409 490 aaPredicted RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 SPTLC1O15269 473 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 B3GAT3O94766 335 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 RPL9P32969 192 aaKnown RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 USP8P40818 1118 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 TAF6P49848 677 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 LILRA4P59901 499 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 DSC1Q08554 894 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 UPP1Q16831 310 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 PDXDC1Q6P996 788 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 ZNF560Q96MR9 790 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 DNAJC7Q99615 494 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 KPNA7A9QM74 516 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 F8VZ95 297 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 PNPLA4P41247 253 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 JAM2P57087 298 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 TNNC1P63316 161 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 E4F1Q66K89 784 aaPredicted RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 LRRC8AQ8IWT6 810 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 ZNF830Q96NB3 372 aaPredicted RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 MRPL9Q9BYD2 267 aaKnown RBP11.74□□□□□ -0.53
BRCC3-204ENST00000369462 GPR88Q9GZN0 384 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 DAAM1Q9Y4D1 1078 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 LAMA3Q16787 3333 aa11.74□□□□□ -0.53
BRCC3-204ENST00000369462 STAU1O95793 577 aaKnown RBP11.73□□□□□ -0.53
BRCC3-204ENST00000369462 P4HA1P13674 534 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 ASPAP45381 313 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 OR1G1P47890 313 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 CDH8P55286 799 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 COLGALT2Q8IYK4 626 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 HASPINQ8TF76 798 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 NUCKS1Q9H1E3 243 aaKnown RBP11.73□□□□□ -0.53
BRCC3-204ENST00000369462 NRDE2Q9H7Z3 1164 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 TDRD15B5MCY1 1934 aaKnown RBP11.73□□□□□ -0.53
BRCC3-204ENST00000369462 F8W810 466 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 CD58P19256 250 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 STAT1P42224 750 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 SV2CQ496J9 727 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 SFMBT2Q5VUG0 894 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 SHC3Q92529 594 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 UROC1Q96N76 676 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 PANX2Q96RD6 677 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 MYO6Q9UM54 1294 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 PRG3Q9Y2Y8 225 aaPredicted RBP11.73□□□□□ -0.53
BRCC3-204ENST00000369462 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 GFPT2O94808 682 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 SOX5P35711 763 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 RAP1GAPP47736 663 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 WDR59Q6PJI9 974 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 LRRC43Q8N309 656 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 RSPH1Q8WYR4 309 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 HERVK_113Q902F9 699 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 YME1L1Q96TA2 773 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 CISHQ9NSE2 258 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 ZNHIT6Q9NWK9 470 aaKnown RBP11.73□□□□□ -0.53
BRCC3-204ENST00000369462 SLC4A7Q9Y6M7 1214 aa11.73□□□□□ -0.53
BRCC3-204ENST00000369462 ITGB1P05556 798 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 KRT5P13647 590 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 MAGEA10P43363 369 aaPredicted RBP11.72□□□□□ -0.53
BRCC3-204ENST00000369462 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 ZNF689Q96CS4 500 aaPredicted RBP11.72□□□□□ -0.53
BRCC3-204ENST00000369462 ZBED2Q9BTP6 218 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 BCO2Q9BYV7 579 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 AIPL1Q9NZN9 384 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 PCDHB4Q9Y5E5 795 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 KIF4AO95239 1232 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 GJB5O95377 273 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 ALDH2P05091 517 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 SKILP12757 684 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 ACO1P21399 889 aaKnown RBP11.72□□□□□ -0.53
BRCC3-204ENST00000369462 HNRNPH3P31942 346 aaKnown RBP11.72□□□□□ -0.53
BRCC3-204ENST00000369462 PBX3P40426 434 aa11.72□□□□□ -0.53
BRCC3-204ENST00000369462 BTG3Q14201 252 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms