RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 WNT8AQ9H1J5 351 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 APOBEC3GQ9HC16 384 aaKnown RBP12.94□□□□□ -0.34
USF1-203ENST00000368021 SQORQ9Y6N5 450 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 GPR182O15218 404 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 PJA2O43164 708 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 KIF5CO60282 957 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 THPOP40225 353 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 EPHB4P54760 987 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 KIF5AQ12840 1032 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 UBXN11Q5T124 520 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 ALKAL1Q6UXT8 129 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 GPIHBP1Q8IV16 184 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 C1orf127Q8N9H9 656 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 DHX38Q92620 1227 aaKnown RBP12.93□□□□□ -0.34
USF1-203ENST00000368021 SNX27Q96L92 541 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.93□□□□□ -0.34
USF1-203ENST00000368021 XYLT2Q9H1B5 865 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 VRTNQ9H8Y1 702 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 SNTG2Q9NY99 539 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 NENFQ9UMX5 172 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 ST3GAL5Q9UNP4 418 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 TRIP11Q15643 1979 aa12.93□□□□□ -0.34
USF1-203ENST00000368021 A0A0U1RQJ8 604 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 ATP8B1O43520 1251 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 CTSHP09668 335 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 MAGEA1P43355 309 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 FPGSQ05932 587 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 NAB2Q15742 525 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 CCDC122Q5T0U0 273 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 SPOPLQ6IQ16 392 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 DEFB128Q7Z7B8 93 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 TMEM199Q8N511 208 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 USP38Q8NB14 1042 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 SLC30A5Q8TAD4 765 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 OLIG1Q8TAK6 271 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 CXorf38Q8TB03 319 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 NXF3Q9H4D5 531 aaKnown RBP12.92□□□□□ -0.34
USF1-203ENST00000368021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.92□□□□□ -0.34
USF1-203ENST00000368021 CNTN3Q9P232 1028 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 SIX4Q9UIU6 781 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 NAGPAQ9UK23 515 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 ITGA11Q9UKX5 1188 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 CNTN6Q9UQ52 1028 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 CEP83Q9Y592 693 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 NUB1Q9Y5A7 615 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 RCCD1A6NED2 376 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
USF1-203ENST00000368021 RECQL4O94761 1208 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 CKBP12277 381 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 ATICP31939 592 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 BPIFB4P59827 614 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 MYL6P60660 151 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 BFSP2Q13515 415 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 ZNF699Q32M78 642 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 FBXO47Q5MNV8 452 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 ZNF618Q5T7W0 954 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 TWF2Q6IBS0 349 aaKnown RBP12.92□□□□□ -0.34
USF1-203ENST00000368021 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
USF1-203ENST00000368021 EPS8L1Q8TE68 723 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 NIF3L1Q9GZT8 377 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 LACRTQ9GZZ8 138 aa12.92□□□□□ -0.34
USF1-203ENST00000368021 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 DDX3XO00571 662 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■■□□ 18
USF1-203ENST00000368021 CYP26A1O43174 497 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 STAU1O95793 577 aaKnown RBP12.91□□□□□ -0.34
USF1-203ENST00000368021 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
USF1-203ENST00000368021 USP8P40818 1118 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 GNG11P61952 73 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 C9orf50Q5SZB4 431 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 SYT10Q6XYQ8 523 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 CCDC91Q7Z6B0 441 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 AGPAT1Q99943 283 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 TRAIPQ9BWF2 469 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 FAM124BQ9H5Z6 455 aaPredicted RBP12.91□□□□□ -0.34
USF1-203ENST00000368021 NOCTQ9UK39 431 aaKnown RBP12.91□□□□□ -0.34
USF1-203ENST00000368021 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 HES2Q9Y543 173 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 IPPQ9Y573 584 aa12.91□□□□□ -0.34
USF1-203ENST00000368021 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
USF1-203ENST00000368021 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 ABL1P00519 1130 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 ITGB3P05106 788 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 KCNE1P15382 129 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 CYP11B1P15538 503 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 TNFAIP3P21580 790 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 CASQ1P31415 396 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 PDE6CP51160 858 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 SHHQ15465 462 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 C16orf59Q7L2K0 433 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 SLC47A2Q86VL8 602 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 ZNF677Q86XU0 584 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 GLYCTKQ8IVS8 523 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 HACE1Q8IYU2 909 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 UBR7Q8N806 425 aa12.9□□□□□ -0.34
USF1-203ENST00000368021 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
USF1-203ENST00000368021 LNX1Q8TBB1 728 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms