RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PDZD4Q76G19 769 aaPredicted RBP6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 DEFB132Q7Z7B7 95 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 SRLQ86TD4 932 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 KBTBD2Q8IY47 623 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 CMTM4Q8IZR5 234 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 LINC01356Q8N9X3 169 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 OR5M3Q8NGP4 307 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 TBCBQ99426 244 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 MYD88Q99836 296 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 ARPC5LQ9BPX5 153 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 NLRC4Q9NPP4 1024 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 TPCN1Q9ULQ1 816 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 RUVBL1Q9Y265 456 aaKnown RBP6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 NR2E1Q9Y466 385 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 ADGRF5Q8IZF2 1346 aa6.9□□□□□ -1.3
RNU4-39P-201ENST00000362455 PRAG1Q86YV5 1406 aa6.9□□□□□ -1.31
RNU4-39P-201ENST00000362455 MROH6A6NGR9 719 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 NT5C1B-RDH14C9J2C7 533 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 FRS3O43559 492 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 ALOX15P16050 662 aaPredicted RBP6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 TXKP42681 527 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 TM4SF4P48230 202 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 IFIT5Q13325 482 aaKnown RBP6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 SP140Q13342 867 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 KCNA10Q16322 511 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 PKN1Q16512 942 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 ZNF568Q3ZCX4 644 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 LONRF3Q496Y0 759 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 FLYWCH1Q4VC44 716 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 ZNF648Q5T619 568 aaPredicted RBP6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 TOGARAM2Q6ZUX3 1019 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 FAM186BQ8IYM0 893 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 DCBLD1Q8N8Z6 715 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 IL31RAQ8NI17 732 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 CEP95Q96GE4 821 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 APIPQ96GX9 242 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 ENKD1Q9H0I2 346 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 WDCPQ9H6R7 721 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 MOCS1Q9NZB8 636 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 CPA4Q9UI42 421 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 PCDHA1Q9Y5I3 950 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 ATRNL1Q5VV63 1379 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 PLEKHH1Q9ULM0 1364 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 PXDNQ92626 1479 aa6.89□□□□□ -1.31
RNU4-39P-201ENST00000362455 LAMC1P11047 1609 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 NAIPQ13075 1403 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 NPHP3Q7Z494 1330 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 A0A1W2PPL8 197 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 NPIPB6E9PJ23 425 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 F2RL2O00254 374 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 SASH1O94885 1247 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 FTH1P19P0C7X4 201 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 PRDX5P30044 214 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 PIK3CBP42338 1070 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 ALDH1A3P47895 512 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 APBA1Q02410 837 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 SAFB2Q14151 953 aaKnown RBP eCLIP6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 MFSD14BQ5SR56 506 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 AFMIDQ63HM1 303 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 XRRA1Q6P2D8 792 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 ADGRE4PQ86SQ3 457 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 PPP1R3BQ86XI6 285 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 UNC5CLQ8IV45 518 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 CELF5Q8N6W0 485 aaKnown RBP6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 CFHR4Q92496 578 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 ANKS1AQ92625 1134 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 RABGGTAQ92696 567 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 LRRC27Q9C0I9 530 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 RSAD1Q9HA92 442 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 IL23AQ9NPF7 189 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 FNIP2Q9P278 1114 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 PUF60Q9UHX1 559 aaKnown RBP6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 SLC4A7Q9Y6M7 1214 aa6.88□□□□□ -1.31
RNU4-39P-201ENST00000362455 CLTCL1P53675 1640 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 SLIT2O94813 1529 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 HFM1A2PYH4 1435 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 RPGRIP1LQ68CZ1 1315 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 TEX33O43247 280 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 SLC26A4O43511 780 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 CD1AP06126 327 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 RAP2AP10114 183 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 KITP10721 976 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 NPR1P16066 1061 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 ZKSCAN1P17029 563 aaPredicted RBP6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 GZMKP49863 264 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 SLURP1P55000 103 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 FAM90A1Q86YD7 464 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 PLXDC1Q8IUK5 500 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 TMEM151BQ8IW70 566 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 PHKBQ93100 1093 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 PGBD4Q96DM1 585 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 IL17RAQ96F46 866 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 BTBD1Q9H0C5 482 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 KCNH6Q9H252 994 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 MRPL46Q9H2W6 279 aaKnown RBP6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 SARS2Q9NP81 518 aaKnown RBP6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 STK26Q9P289 416 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 PCDHA6Q9UN73 950 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 DMTF1Q9Y222 760 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms