RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ZNF569Q5MCW4 686 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 RBBP8NLQ8NC74 664 aaPredicted RBP24.82■■□□□ 1.56
SDF4-202ENST00000360001 SEPT11Q9NVA2 429 aaKnown RBP24.82■■□□□ 1.56
SDF4-202ENST00000360001 MMEP08473 750 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 WEE2P0C1S8 567 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 BPIFB4P59827 614 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 MRPL10Q7Z7H8 261 aaKnown RBP24.82■■□□□ 1.56
SDF4-202ENST00000360001 PCDHB18PQ96TA0 734 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 R3HCC1Q9Y3T6 440 aaKnown RBP24.82■■□□□ 1.56
SDF4-202ENST00000360001 PAXBP1Q9Y5B6 917 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 SCN1AP35498 2009 aa24.81■■□□□ 1.56
SDF4-202ENST00000360001 ITGA4P13612 1032 aa24.81■■□□□ 1.56
SDF4-202ENST00000360001 CD58P19256 250 aa24.81■■□□□ 1.56
SDF4-202ENST00000360001 SMYD5Q6GMV2 418 aa24.81■■□□□ 1.56
SDF4-202ENST00000360001 ZFP42Q96MM3 310 aa24.81■■□□□ 1.56
SDF4-202ENST00000360001 TAS2R14Q9NYV8 317 aa24.81■■□□□ 1.56
SDF4-202ENST00000360001 SALL4Q9UJQ4 1053 aa24.81■■□□□ 1.56
SDF4-202ENST00000360001 MACROD2A1Z1Q3 448 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 PTGESO14684 152 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 PPEF2O14830 753 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 ZNF623O75123 536 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 HACE1Q8IYU2 909 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 ADAM2Q99965 735 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 RAB27AP51159 221 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 LRRC8DQ7L1W4 858 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 SLC35F6Q8N357 371 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 LPPQ93052 612 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 ARMC5Q96C12 935 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 SDCBP2Q9H190 292 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 SMYD3Q9H7B4 428 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 INTUQ9ULD6 942 aa24.8■■□□□ 1.56
SDF4-202ENST00000360001 A0A0U1RQF3 1178 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 ANO9A1A5B4 782 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 TMCO5BA8MYB1 307 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 XPOTO43592 962 aaKnown RBP24.79■■□□□ 1.56
SDF4-202ENST00000360001 TFRCP02786 760 aaKnown RBP24.79■■□□□ 1.56
SDF4-202ENST00000360001 H2AFZP0C0S5 128 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 SELPP16109 830 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 RAP1GAPP47736 663 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 LBX1P52954 281 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 SOX4Q06945 474 aaPredicted RBP24.79■■□□□ 1.56
SDF4-202ENST00000360001 C9orf57Q5W0N0 161 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 AGMOQ6ZNB7 445 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 H2AFVQ71UI9 128 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 ZNF677Q86XU0 584 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 LRRC52Q8N7C0 313 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 GSTCDQ8NEC7 633 aa24.79■■□□□ 1.56
SDF4-202ENST00000360001 SECISBP2LQ93073 1101 aaKnown RBP24.79■■□□□ 1.56
SDF4-202ENST00000360001 PPP1R10Q96QC0 940 aaKnown RBP24.79■■□□□ 1.56
SDF4-202ENST00000360001 P4HA1P13674 534 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 ATF7P17544 494 aaPredicted RBP24.78■■□□□ 1.56
SDF4-202ENST00000360001 CYP3A5P20815 502 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 YWHAEP62258 255 aaKnown RBP24.78■■□□□ 1.56
SDF4-202ENST00000360001 BFSP2Q13515 415 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 GIT1Q9Y2X7 761 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 BTNL10A8MVZ5 291 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 PQBP1O60828 265 aaKnown RBP24.78■■□□□ 1.56
SDF4-202ENST00000360001 GNA15P30679 374 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 CASQ1P31415 396 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 MLH1P40692 756 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 GALCP54803 685 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 CDH8P55286 799 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 MYO1EQ12965 1108 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 ISCUQ9H1K1 167 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 CYP3A43Q9HB55 503 aa24.78■■□□□ 1.56
SDF4-202ENST00000360001 PIRO00625 290 aa24.77■■□□□ 1.56
SDF4-202ENST00000360001 TLR3O15455 904 aaKnown RBP24.77■■□□□ 1.56
SDF4-202ENST00000360001 AFF1P51825 1210 aaKnown RBP24.77■■□□□ 1.56
SDF4-202ENST00000360001 ATN1P54259 1190 aaPredicted RBP24.77■■□□□ 1.56
SDF4-202ENST00000360001 SLC39A5Q6ZMH5 540 aa24.77■■□□□ 1.56
SDF4-202ENST00000360001 GAD1Q99259 594 aa24.77■■□□□ 1.56
SDF4-202ENST00000360001 GOLGA2P5Q9HBQ8 144 aa24.77■■□□□ 1.56
SDF4-202ENST00000360001 GZMAP12544 262 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 TNNC1P63316 161 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 PKN2Q16513 984 aaKnown RBP24.76■■□□□ 1.55
SDF4-202ENST00000360001 ANKRD33Q7Z3H0 272 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 RNF10Q8N5U6 811 aaKnown RBP24.76■■□□□ 1.55
SDF4-202ENST00000360001 CAPN6Q9Y6Q1 641 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 PITPNM1O00562 1244 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 MOCS3O95396 460 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 GPNMBQ14956 572 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 ZNF394Q53GI3 561 aa24.76■■□□□ 1.55
SDF4-202ENST00000360001 RTN4RL1Q86UN2 441 aaPredicted RBP24.76■■□□□ 1.55
SDF4-202ENST00000360001 FAM170AA1A519 330 aa24.75■■□□□ 1.55
SDF4-202ENST00000360001 ARL5CA6NH57 179 aa24.75■■□□□ 1.55
SDF4-202ENST00000360001 RTN2O75298 545 aa24.75■■□□□ 1.55
SDF4-202ENST00000360001 FTLP02792 175 aaPredicted RBP24.75■■□□□ 1.55
SDF4-202ENST00000360001 TMEM253P0C7T8 217 aa24.75■■□□□ 1.55
SDF4-202ENST00000360001 WHAMMQ8TF30 809 aa24.75■■□□□ 1.55
SDF4-202ENST00000360001 RGS18Q9NS28 235 aa24.75■■□□□ 1.55
SDF4-202ENST00000360001 MIOSQ9NXC5 875 aa24.75■■□□□ 1.55
SDF4-202ENST00000360001 NBNO60934 754 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 COL6A1P12109 1028 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 SKIP12755 728 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 LRPAP1P30533 357 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 CLEC16AQ2KHT3 1053 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 ZNF598Q86UK7 904 aaKnown RBP24.74■■□□□ 1.55
SDF4-202ENST00000360001 ECHDC2Q86YB7 292 aa24.74■■□□□ 1.55
SDF4-202ENST00000360001 DIS3LQ8TF46 1054 aaKnown RBP24.74■■□□□ 1.55
SDF4-202ENST00000360001 LINC01599Q8WXQ3 324 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms