RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Hoxb8P09632 243 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 PdgfraP26618 1089 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cd68P31996 326 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cav1P49817 178 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pkn1P70268 946 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Krt32Q62168 407 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Arl13bQ640N2 427 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Msl1Q6PDM1 616 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Serpinb3dQ6UKZ0 387 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Sh3d21Q7TSG5 549 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ahcyl1Q80SW1 530 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Efcab14Q8BGQ6 484 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 TbckQ8BM85 762 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 LnpepQ8C129 1025 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Btbd7Q8CFE5 1130 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Parp10Q8CIE4 960 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Plekha4Q8VC98 588 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Bbox1Q924Y0 387 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cdc26Q99JP4 85 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Kcnh7Q9ER47 1195 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm5936A2BG95 728 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm5640A3KG49 728 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tcp10bE9PYJ0 438 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Sec24cG3X972 1096 aaKnown RBP6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Zfpm1O35615 995 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Itgb5O70309 798 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 DtnbO70585 659 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 PorP37040 678 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ighmbp2P40694 993 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Abi2P62484 446 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Slc2a13Q3UHK1 637 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cyfip2Q5SQX6 1253 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Fam214aQ69ZK7 1075 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Styk1Q6J9G1 429 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Nsun6Q7TS68 476 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 TbataQ7TSD4 393 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 R3hdm2Q80TM6 1044 aaKnown RBP6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ankzf1Q80UU1 748 aaKnown RBP6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 TdrkhQ80VL1 560 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ttc29Q80VM3 471 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 BC048507Q80ZS7 89 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 UstQ8BUB6 407 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tmem161bQ8C2L6 487 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pnpt1Q8K1R3 783 aaKnown RBP6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cacnb1Q8R3Z5 597 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Atxn7Q8R4I1 867 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Slc14a1Q8VHL0 384 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Trim60Q8VI40 466 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 YwhabQ9CQV8 246 aaKnown RBP6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ints12Q9D168 461 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Mphosph6Q9D1Q1 161 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tekt1Q9DAJ2 418 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 PolhQ9JJN0 694 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Clcn2Q9R0A1 908 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cetn2Q9R1K9 172 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cacna2d3Q9Z1L5 1091 aa6.63□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ralgapa2A3KGS3 1872 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm45261A0A1B0GSP6 197 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Eddm13E9Q7F5 164 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 AoahO35298 574 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 CflarO35732 481 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Got1P05201 413 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Nr3c1P06537 783 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 ArP19091 899 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 GckP52792 465 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Micall2Q3TN34 1009 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gdpd4Q3TT99 632 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Q3TTJ4 293 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Yipf3Q3UDR8 347 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Specc1Q5SXY1 1067 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Prpf38bQ80SY5 542 aaKnown RBP6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rhbdf2Q80WQ6 827 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tmem117Q8BH18 514 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Fbxo43Q8CDI2 640 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Klhl11Q8CE33 709 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Agap3Q8VHH5 910 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Senp2Q91ZX6 588 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Grhl1Q921D9 618 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Xpo6Q924Z6 1125 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 MmadhcQ99LS1 296 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rnaseh2aQ9CWY8 301 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 4930449I24RikQ9D5E3 319 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rexo2Q9D8S4 237 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Smok2bQ9QYZ3 484 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Smok2aQ9QYZ6 504 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm28036V9GXJ1 658 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 RptorQ8K4Q0 1335 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 2210011C24RikA0A087WQ89 206 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Slfn9B1ARD6 910 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Zbtb10E9Q8X5 861 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rap1gds1E9Q912 607 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm3127E9Q9P5 263 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm3453K7N724 263 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cdk2ap1O35207 114 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pitpnm1O35954 1243 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Diaph2O70566 1098 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Parp2O88554 559 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Xrcc5P27641 732 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Hps5P59438 1126 aa6.62□□□□□ -1.35
Lig4-202ENSMUST00000170033 Slc8a1P70414 970 aa6.62□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms