RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W TPS3P38426 1054 aaKnown RBP3.31□□□□□ -1.88
SDC25YLL016W OSW7P43611 510 aa3.31□□□□□ -1.88
SDC25YLL016W ATG36P46983 293 aa3.31□□□□□ -1.88
SDC25YLL016W CSC1Q06538 782 aa3.31□□□□□ -1.88
SDC25YLL016W TOM20P35180 183 aa3.3□□□□□ -1.88
SDC25YLL016W GLO3P38682 493 aaKnown RBP3.3□□□□□ -1.88
SDC25YLL016W FPR3P38911 411 aaKnown RBP3.3□□□□□ -1.88
SDC25YLL016W PNP1Q05788 311 aa3.3□□□□□ -1.88
SDC25YLL016W STH1P32597 1359 aa3.3□□□□□ -1.88
SDC25YLL016W TRL1P09880 827 aaKnown RBP3.3□□□□□ -1.88
SDC25YLL016W DCW1P36091 449 aa3.3□□□□□ -1.88
SDC25YLL016W ALD6P54115 500 aaKnown RBP3.3□□□□□ -1.88
SDC25YLL016W MAG2Q06436 670 aaKnown RBP3.3□□□□□ -1.88
SDC25YLL016W STB3Q12427 513 aa3.3□□□□□ -1.88
SDC25YLL016W RDS2P19541 446 aaKnown RBP3.29□□□□□ -1.88
SDC25YLL016W TFG1P41895 735 aaPredicted RBP3.29□□□□□ -1.88
SDC25YLL016W TBF1Q02457 562 aa3.29□□□□□ -1.88
SDC25YLL016W PUN1Q06991 263 aa3.29□□□□□ -1.88
SDC25YLL016W TUM1Q08686 304 aaKnown RBP3.29□□□□□ -1.88
SDC25YLL016W ATG1P53104 897 aa3.29□□□□□ -1.88
SDC25YLL016W UBX5Q06682 500 aa3.29□□□□□ -1.88
SDC25YLL016W TY3B-GQ99315 1547 aa3.29□□□□□ -1.88
SDC25YLL016W USO1P25386 1790 aa3.29□□□□□ -1.88
SDC25YLL016W GAP1P19145 602 aaPredicted RBP3.28□□□□□ -1.88
SDC25YLL016W EMP47P43555 445 aa3.28□□□□□ -1.88
SDC25YLL016W NAF1P53919 492 aaKnown RBP3.28□□□□□ -1.88
SDC25YLL016W CWC15Q03772 175 aaKnown RBP3.28□□□□□ -1.88
SDC25YLL016W WRS1Q12109 432 aaKnown RBP3.28□□□□□ -1.88
SDC25YLL016W BNR1P40450 1375 aa3.28□□□□□ -1.88
SDC25YLL016W TY1B-NL2Q99337 1749 aaKnown RBP3.28□□□□□ -1.88
SDC25YLL016W TRM1P15565 570 aaKnown RBP3.28□□□□□ -1.88
SDC25YLL016W SIT4P20604 311 aa3.28□□□□□ -1.88
SDC25YLL016W SWE1P32944 819 aa3.28□□□□□ -1.88
SDC25YLL016W PUF6Q04373 656 aaKnown RBP3.28□□□□□ -1.88
SDC25YLL016W YOL036WQ08206 761 aa3.28□□□□□ -1.88
SDC25YLL016W PEP7P32609 515 aa3.28□□□□□ -1.88
SDC25YLL016W RSC30P38781 883 aa3.28□□□□□ -1.88
SDC25YLL016W BOL3P39724 118 aa3.28□□□□□ -1.88
SDC25YLL016W QDR1P40475 563 aa3.28□□□□□ -1.88
SDC25YLL016W ALD3P54114 506 aa3.28□□□□□ -1.88
SDC25YLL016W NUT2Q06213 157 aa3.28□□□□□ -1.88
SDC25YLL016W YOR131CQ12486 218 aa3.28□□□□□ -1.88
SDC25YLL016W TFB4Q12004 338 aa3.27□□□□□ -1.89
SDC25YLL016W CDC53Q12018 815 aaKnown RBP3.27□□□□□ -1.89
SDC25YLL016W ALG12P53730 551 aa3.27□□□□□ -1.89
SDC25YLL016W POB3Q04636 552 aaKnown RBP3.27□□□□□ -1.89
SDC25YLL016W SPT2P06843 333 aaPredicted RBP3.26□□□□□ -1.89
SDC25YLL016W HAP4P14064 554 aa3.26□□□□□ -1.89
SDC25YLL016W FYV10P40492 516 aa3.26□□□□□ -1.89
SDC25YLL016W MNL2Q12205 849 aa3.26□□□□□ -1.89
SDC25YLL016W NUP157P40064 1391 aaKnown RBP3.26□□□□□ -1.89
SDC25YLL016W PHO87P25360 923 aa3.26□□□□□ -1.89
SDC25YLL016W ATG3P40344 310 aa3.26□□□□□ -1.89
SDC25YLL016W YJR107WP47145 328 aa3.26□□□□□ -1.89
SDC25YLL016W CWC24P53769 259 aa3.26□□□□□ -1.89
SDC25YLL016W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SDC25YLL016W FRT1Q99332 602 aa3.26□□□□□ -1.89
SDC25YLL016W CIT2P08679 460 aa3.26□□□□□ -1.89
SDC25YLL016W CLN2P20438 545 aa3.26□□□□□ -1.89
SDC25YLL016W YNL115CP53925 644 aa3.26□□□□□ -1.89
SDC25YLL016W CDC73Q06697 393 aa3.26□□□□□ -1.89
SDC25YLL016W BUD21Q08492 214 aaPredicted RBP3.26□□□□□ -1.89
SDC25YLL016W AIR2Q12476 344 aaKnown RBP3.26□□□□□ -1.89
SDC25YLL016W SSB1P11484 613 aaKnown RBP3.25□□□□□ -1.89
SDC25YLL016W SRS2P12954 1174 aa3.25□□□□□ -1.89
SDC25YLL016W SLI15P38283 698 aa3.25□□□□□ -1.89
SDC25YLL016W GTT3P39996 337 aa3.25□□□□□ -1.89
SDC25YLL016W SSB2P40150 613 aaKnown RBP3.25□□□□□ -1.89
SDC25YLL016W IOC3P43596 787 aa3.25□□□□□ -1.89
SDC25YLL016W ACS2P52910 683 aaKnown RBP3.25□□□□□ -1.89
SDC25YLL016W SPR28Q04921 423 aa3.25□□□□□ -1.89
SDC25YLL016W YGR161W-CQ3E744 92 aa3.25□□□□□ -1.89
SDC25YLL016W RPT1P33299 467 aaKnown RBP3.25□□□□□ -1.89
SDC25YLL016W PUS6P53294 404 aa3.25□□□□□ -1.89
SDC25YLL016W HAP1P0CE41 1502 aa3.24□□□□□ -1.89
SDC25YLL016W HTA1P04911 132 aaKnown RBP3.24□□□□□ -1.89
SDC25YLL016W HTA2P04912 132 aa3.24□□□□□ -1.89
SDC25YLL016W MCM2P29469 868 aa3.24□□□□□ -1.89
SDC25YLL016W MET4P32389 672 aa3.24□□□□□ -1.89
SDC25YLL016W RTT106P40161 455 aa3.24□□□□□ -1.89
SDC25YLL016W ACF4P47129 309 aa3.24□□□□□ -1.89
SDC25YLL016W MAK10Q02197 733 aa3.24□□□□□ -1.89
SDC25YLL016W TRP5P00931 707 aaKnown RBP3.24□□□□□ -1.89
SDC25YLL016W AI4P03878 556 aa3.24□□□□□ -1.89
SDC25YLL016W MPH3P0CE00 602 aa3.24□□□□□ -1.89
SDC25YLL016W MIP1P15801 1254 aa3.24□□□□□ -1.89
SDC25YLL016W PDI1P17967 522 aaKnown RBP3.24□□□□□ -1.89
SDC25YLL016W VAN1P23642 535 aa3.24□□□□□ -1.89
SDC25YLL016W YAP3P38749 330 aa3.24□□□□□ -1.89
SDC25YLL016W ROM1P53046 1155 aa3.24□□□□□ -1.89
SDC25YLL016W SEC7P11075 2009 aaKnown RBP3.24□□□□□ -1.89
SDC25YLL016W SOH1P38633 127 aa3.24□□□□□ -1.89
SDC25YLL016W VPS16Q03308 798 aa3.24□□□□□ -1.89
SDC25YLL016W STE20Q03497 939 aaKnown RBP3.24□□□□□ -1.89
SDC25YLL016W NSE3Q05541 303 aa3.24□□□□□ -1.89
SDC25YLL016W STI1P15705 589 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SDC25YLL016W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SDC25YLL016W YJL049WP47048 450 aa3.23□□□□□ -1.89
SDC25YLL016W GAS4Q08271 471 aa3.23□□□□□ -1.89
SDC25YLL016W YRR1Q12172 810 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 98.9 ms