RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C CCP1P00431 361 aa5.9□□□□□ -1.46
SRP40YKR092C YML083CQ04526 418 aa5.9□□□□□ -1.46
SRP40YKR092C PHO87P25360 923 aa5.89□□□□□ -1.47
SRP40YKR092C RPL34AP87262 121 aaPredicted RBP5.89□□□□□ -1.47
SRP40YKR092C HDA3Q06623 655 aa5.89□□□□□ -1.47
SRP40YKR092C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
SRP40YKR092C TSC13Q99190 310 aa5.89□□□□□ -1.47
SRP40YKR092C HAP4P14064 554 aa5.88□□□□□ -1.47
SRP40YKR092C PDI1P17967 522 aaKnown RBP5.88□□□□□ -1.47
SRP40YKR092C GEF1P37020 779 aa5.88□□□□□ -1.47
SRP40YKR092C CDC19P00549 500 aaKnown RBP5.87□□□□□ -1.47
SRP40YKR092C UBX7P38349 436 aa5.87□□□□□ -1.47
SRP40YKR092C YFL034WP43564 1073 aa5.87□□□□□ -1.47
SRP40YKR092C ACS2P52910 683 aaKnown RBP5.87□□□□□ -1.47
SRP40YKR092C NAM8Q00539 523 aaKnown RBP5.87□□□□□ -1.47
SRP40YKR092C RPP2BP02400 110 aaKnown RBP5.86□□□□□ -1.47
SRP40YKR092C DAT1P13483 248 aaKnown RBP5.86□□□□□ -1.47
SRP40YKR092C AIM9P40053 627 aaKnown RBP5.86□□□□□ -1.47
SRP40YKR092C UTR2P32623 467 aa5.85□□□□□ -1.47
SRP40YKR092C DLD3P39976 496 aaKnown RBP5.85□□□□□ -1.47
SRP40YKR092C VTC4P47075 721 aa5.85□□□□□ -1.47
SRP40YKR092C SPT2P06843 333 aaPredicted RBP5.84□□□□□ -1.47
SRP40YKR092C TBS1P38114 1094 aa5.84□□□□□ -1.47
SRP40YKR092C MTC5Q03897 1148 aa5.84□□□□□ -1.47
SRP40YKR092C DPH6Q12429 685 aa5.84□□□□□ -1.47
SRP40YKR092C DAL1P32375 460 aa5.83□□□□□ -1.48
SRP40YKR092C ROM1P53046 1155 aa5.83□□□□□ -1.48
SRP40YKR092C GAS4Q08271 471 aa5.83□□□□□ -1.48
SRP40YKR092C NTH2P35172 780 aa5.82□□□□□ -1.48
SRP40YKR092C SLX8P40072 274 aa5.82□□□□□ -1.48
SRP40YKR092C LYS5P50113 272 aa5.82□□□□□ -1.48
SRP40YKR092C WTM2Q12206 467 aa5.82□□□□□ -1.48
SRP40YKR092C SWI5P08153 709 aa5.81□□□□□ -1.48
SRP40YKR092C JJJ3P47138 172 aa5.81□□□□□ -1.48
SRP40YKR092C RPS6AP0CX37 236 aaKnown RBP5.8□□□□□ -1.48
SRP40YKR092C RPS6BP0CX38 236 aaPredicted RBP5.8□□□□□ -1.48
SRP40YKR092C VAN1P23642 535 aa5.8□□□□□ -1.48
SRP40YKR092C CDC3P32457 520 aaKnown RBP5.8□□□□□ -1.48
SRP40YKR092C CUZ1P53899 274 aa5.8□□□□□ -1.48
SRP40YKR092C PUF6Q04373 656 aaKnown RBP5.8□□□□□ -1.48
SRP40YKR092C CYT1P07143 309 aa5.78□□□□□ -1.48
SRP40YKR092C SSN3P39073 555 aa5.78□□□□□ -1.48
SRP40YKR092C UTP7P40055 554 aaKnown RBP5.78□□□□□ -1.48
SRP40YKR092C UBP15P50101 1230 aa5.77□□□□□ -1.49
SRP40YKR092C MSN5P52918 1224 aa5.77□□□□□ -1.49
SRP40YKR092C CWC15Q03772 175 aaKnown RBP5.77□□□□□ -1.49
SRP40YKR092C TRS33Q99394 268 aa5.77□□□□□ -1.49
SRP40YKR092C SLA1P32790 1244 aa5.76□□□□□ -1.49
SRP40YKR092C MDJ1P35191 511 aa5.76□□□□□ -1.49
SRP40YKR092C ICP55P40051 511 aa5.76□□□□□ -1.49
SRP40YKR092C PUN1Q06991 263 aa5.76□□□□□ -1.49
SRP40YKR092C TY1A-DR3Q12441 440 aa5.76□□□□□ -1.49
SRP40YKR092C UBP1P25037 809 aa5.75□□□□□ -1.49
SRP40YKR092C CEM1P39525 442 aa5.75□□□□□ -1.49
SRP40YKR092C SUM1P46676 1062 aa5.75□□□□□ -1.49
SRP40YKR092C CWH41P53008 833 aa5.75□□□□□ -1.49
SRP40YKR092C SRS2P12954 1174 aa5.74□□□□□ -1.49
SRP40YKR092C PNP1Q05788 311 aa5.74□□□□□ -1.49
SRP40YKR092C NGR1P32831 672 aaKnown RBP5.73□□□□□ -1.49
SRP40YKR092C AHP1P38013 176 aaKnown RBP5.73□□□□□ -1.49
SRP40YKR092C ALA1P40825 983 aaKnown RBP5.73□□□□□ -1.49
SRP40YKR092C YMR265CQ03508 461 aaKnown RBP5.73□□□□□ -1.49
SRP40YKR092C PUS1Q12211 544 aaKnown RBP5.73□□□□□ -1.49
SRP40YKR092C HAT1Q12341 374 aa5.73□□□□□ -1.49
SRP40YKR092C DIT1P21623 536 aa5.72□□□□□ -1.49
SRP40YKR092C TPS3P38426 1054 aaKnown RBP5.72□□□□□ -1.49
SRP40YKR092C YPQ2Q06328 317 aa5.72□□□□□ -1.49
SRP40YKR092C ALD4P46367 519 aaKnown RBP5.71□□□□□ -1.5
SRP40YKR092C NSG2P53898 299 aa5.71□□□□□ -1.5
SRP40YKR092C URN1Q06525 465 aaKnown RBP5.71□□□□□ -1.5
SRP40YKR092C PHM7Q12252 991 aa5.71□□□□□ -1.5
SRP40YKR092C SUV3P32580 737 aa5.7□□□□□ -1.5
SRP40YKR092C KRE33P53914 1056 aaKnown RBP5.7□□□□□ -1.5
SRP40YKR092C ADE12P80210 433 aaKnown RBP5.7□□□□□ -1.5
SRP40YKR092C KAR5Q04746 504 aa5.7□□□□□ -1.5
SRP40YKR092C SYT1Q06836 1226 aa5.7□□□□□ -1.5
SRP40YKR092C THI72Q08579 599 aa5.7□□□□□ -1.5
SRP40YKR092C AI1P03875 834 aa5.69□□□□□ -1.5
SRP40YKR092C FUR4P05316 633 aaKnown RBP5.69□□□□□ -1.5
SRP40YKR092C MCM1P11746 286 aa5.69□□□□□ -1.5
SRP40YKR092C JJJ2P46997 583 aa5.69□□□□□ -1.5
SRP40YKR092C YML020WQ03722 664 aa5.69□□□□□ -1.5
SRP40YKR092C RRN6P32786 894 aa5.68□□□□□ -1.5
SRP40YKR092C SHM1P37292 490 aaPredicted RBP5.68□□□□□ -1.5
SRP40YKR092C YFL066CP43538 392 aa5.68□□□□□ -1.5
SRP40YKR092C LSB3P43603 459 aaKnown RBP5.68□□□□□ -1.5
SRP40YKR092C IRE1P32361 1115 aa5.67□□□□□ -1.5
SRP40YKR092C YBR197CP38306 217 aa5.67□□□□□ -1.5
SRP40YKR092C YDR461C-AQ2V2P7 80 aa5.67□□□□□ -1.5
SRP40YKR092C BOL3P39724 118 aa5.66□□□□□ -1.5
SRP40YKR092C FOX2Q02207 900 aaKnown RBP5.66□□□□□ -1.5
SRP40YKR092C CAB1Q04430 367 aa5.66□□□□□ -1.5
SRP40YKR092C ISC10P32645 267 aa5.65□□□□□ -1.5
SRP40YKR092C SCD5P34758 872 aa5.65□□□□□ -1.5
SRP40YKR092C HXT5P38695 592 aa5.65□□□□□ -1.5
SRP40YKR092C SSF1P38789 453 aaPredicted RBP5.65□□□□□ -1.5
SRP40YKR092C YBL113CQ7M4S9 792 aa5.65□□□□□ -1.5
SRP40YKR092C Q0182Q9ZZW1 134 aa5.65□□□□□ -1.5
SRP40YKR092C SLD2P34252 453 aa5.64□□□□□ -1.51
SRP40YKR092C ERP5P38819 212 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms