RNA–Protein interactions for RNA: YDR323C

PEP7, Transcript of Adaptor protein involved in vesicle-mediated vacuolar protein sorting, yeast

Gene PEP7, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP7	YDR323C	MRX12	P47084	519 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	DPH6	Q12429	685 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	CCP1	P00431	361 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	RDS2	P19541	446 aa	Known RBP	5.13	□□□□□ -1.59
PEP7	YDR323C	PEP12	P32854	288 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	MNN4	P36044	1178 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	KTR7	P40504	517 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	YFR016C	P43597	1233 aa	Known RBP	5.13	□□□□□ -1.59
PEP7	YDR323C	ATG20	Q07528	640 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	FRA1	Q07825	749 aa		5.13	□□□□□ -1.59
PEP7	YDR323C	NOP7	P53261	605 aa	Known RBP	5.12	□□□□□ -1.59
PEP7	YDR323C	ISU1	Q03020	165 aa		5.12	□□□□□ -1.59
PEP7	YDR323C	YML083C	Q04526	418 aa		5.12	□□□□□ -1.59
PEP7	YDR323C	RPP2B	P02400	110 aa	Known RBP	5.11	□□□□□ -1.59
PEP7	YDR323C	LYS5	P50113	272 aa		5.11	□□□□□ -1.59
PEP7	YDR323C	CDC19	P00549	500 aa	Known RBP	5.1	□□□□□ -1.59
PEP7	YDR323C	CDC3	P32457	520 aa	Known RBP	5.1	□□□□□ -1.59
PEP7	YDR323C	ECM23	Q02710	187 aa		5.1	□□□□□ -1.59
PEP7	YDR323C	KRI1	P42846	591 aa	Known RBP	5.09	□□□□□ -1.59
PEP7	YDR323C	DAL1	P32375	460 aa		5.08	□□□□□ -1.6
PEP7	YDR323C	JJJ3	P47138	172 aa		5.08	□□□□□ -1.6
PEP7	YDR323C	NAM8	Q00539	523 aa	Known RBP	5.08	□□□□□ -1.6
PEP7	YDR323C	GAL2	P13181	574 aa		5.07	□□□□□ -1.6
PEP7	YDR323C	DLD3	P39976	496 aa	Known RBP	5.07	□□□□□ -1.6
PEP7	YDR323C	UTP13	Q05946	817 aa	Known RBP	5.07	□□□□□ -1.6
PEP7	YDR323C	NOP8	Q08287	484 aa	Predicted RBP	5.07	□□□□□ -1.6
PEP7	YDR323C	SOH1	P38633	127 aa		5.07	□□□□□ -1.6
PEP7	YDR323C	NUG1	P40010	520 aa	Known RBP	5.07	□□□□□ -1.6
PEP7	YDR323C	ICP55	P40051	511 aa		5.07	□□□□□ -1.6
PEP7	YDR323C	SUB1	P54000	292 aa	Known RBP	5.07	□□□□□ -1.6
PEP7	YDR323C	UBX7	P38349	436 aa		5.06	□□□□□ -1.6
PEP7	YDR323C	APL6	P46682	809 aa		5.06	□□□□□ -1.6
PEP7	YDR323C	PHO87	P25360	923 aa		5.05	□□□□□ -1.6
PEP7	YDR323C	MDG1	P53885	366 aa		5.05	□□□□□ -1.6
PEP7	YDR323C	VPS72	Q03388	795 aa		5.05	□□□□□ -1.6
PEP7	YDR323C	HAP4	P14064	554 aa		5.04	□□□□□ -1.6
PEP7	YDR323C	SLD2	P34252	453 aa		5.04	□□□□□ -1.6
PEP7	YDR323C	SPT2	P06843	333 aa	Predicted RBP	5.03	□□□□□ -1.6
PEP7	YDR323C	ASF1	P32447	279 aa		5.03	□□□□□ -1.6
PEP7	YDR323C	MSN5	P52918	1224 aa		5.03	□□□□□ -1.6
PEP7	YDR323C	CUZ1	P53899	274 aa		5.03	□□□□□ -1.6
PEP7	YDR323C	ISR1	Q06098	443 aa	Known RBP	5.03	□□□□□ -1.6
PEP7	YDR323C	PUS1	Q12211	544 aa	Known RBP	5.03	□□□□□ -1.6
PEP7	YDR323C	PHM7	Q12252	991 aa		5.03	□□□□□ -1.6
PEP7	YDR323C	SWE1	P32944	819 aa		5.02	□□□□□ -1.61
PEP7	YDR323C	RPS0B	P46654	252 aa	Known RBP	5.02	□□□□□ -1.61
PEP7	YDR323C	UBP15	P50101	1230 aa		5.02	□□□□□ -1.61
PEP7	YDR323C	WTM2	Q12206	467 aa		5.02	□□□□□ -1.61
PEP7	YDR323C	GIN4	Q12263	1142 aa		5.02	□□□□□ -1.61
PEP7	YDR323C	HAT1	Q12341	374 aa		5.02	□□□□□ -1.61
PEP7	YDR323C	YFL034W	P43564	1073 aa		5.02	□□□□□ -1.61
PEP7	YDR323C	ACS2	P52910	683 aa	Known RBP	5.02	□□□□□ -1.61
PEP7	YDR323C	TSC13	Q99190	310 aa		5.02	□□□□□ -1.61
PEP7	YDR323C	PDI1	P17967	522 aa	Known RBP	5.01	□□□□□ -1.61
PEP7	YDR323C	UTR2	P32623	467 aa		5.01	□□□□□ -1.61
PEP7	YDR323C	SSF1	P38789	453 aa	Predicted RBP	5.01	□□□□□ -1.61
PEP7	YDR323C	CEM1	P39525	442 aa		5.01	□□□□□ -1.61
PEP7	YDR323C	RTS3	P53289	263 aa		5.01	□□□□□ -1.61
PEP7	YDR323C	PUF6	Q04373	656 aa	Known RBP	5.01	□□□□□ -1.61
PEP7	YDR323C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
PEP7	YDR323C	SLA1	P32790	1244 aa		5	□□□□□ -1.61
PEP7	YDR323C	BRN1	P38170	754 aa		5	□□□□□ -1.61
PEP7	YDR323C	SSN3	P39073	555 aa		5	□□□□□ -1.61
PEP7	YDR323C	GAS4	Q08271	471 aa		5	□□□□□ -1.61
PEP7	YDR323C	DAT1	P13483	248 aa	Known RBP	4.99	□□□□□ -1.61
PEP7	YDR323C	HAL5	P38970	855 aa	Known RBP	4.99	□□□□□ -1.61
PEP7	YDR323C	ROM1	P53046	1155 aa		4.99	□□□□□ -1.61
PEP7	YDR323C	DIT1	P21623	536 aa		4.98	□□□□□ -1.61
PEP7	YDR323C	TBS1	P38114	1094 aa		4.98	□□□□□ -1.61
PEP7	YDR323C	AIM9	P40053	627 aa	Known RBP	4.98	□□□□□ -1.61
PEP7	YDR323C	HDA3	Q06623	655 aa		4.98	□□□□□ -1.61
PEP7	YDR323C	AI1	P03875	834 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	VAN1	P23642	535 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	MDJ1	P35191	511 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	AHP1	P38013	176 aa	Known RBP	4.97	□□□□□ -1.61
PEP7	YDR323C	NSG2	P53898	299 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	YMR265C	Q03508	461 aa	Known RBP	4.97	□□□□□ -1.61
PEP7	YDR323C	CWC15	Q03772	175 aa	Known RBP	4.97	□□□□□ -1.61
PEP7	YDR323C	MET10	P39692	1035 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	LSB3	P43603	459 aa	Known RBP	4.97	□□□□□ -1.61
PEP7	YDR323C	ATG36	P46983	293 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	KAR5	Q04746	504 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	SYT1	Q06836	1226 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	PUN1	Q06991	263 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	TY1A-DR3	Q12441	440 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	YDR461C-A	Q2V2P7	80 aa		4.97	□□□□□ -1.61
PEP7	YDR323C	NTH2	P35172	780 aa		4.96	□□□□□ -1.62
PEP7	YDR323C	PNP1	Q05788	311 aa		4.96	□□□□□ -1.62
PEP7	YDR323C	TRS33	Q99394	268 aa		4.96	□□□□□ -1.62
PEP7	YDR323C	SRS2	P12954	1174 aa		4.95	□□□□□ -1.62
PEP7	YDR323C	TPS3	P38426	1054 aa	Known RBP	4.95	□□□□□ -1.62
PEP7	YDR323C	UTP7	P40055	554 aa	Known RBP	4.95	□□□□□ -1.62
PEP7	YDR323C	YFL066C	P43538	392 aa		4.95	□□□□□ -1.62
PEP7	YDR323C	SUM1	P46676	1062 aa		4.95	□□□□□ -1.62
PEP7	YDR323C	YJR008W	P47085	338 aa		4.95	□□□□□ -1.62
PEP7	YDR323C	KRE33	P53914	1056 aa	Known RBP	4.95	□□□□□ -1.62
PEP7	YDR323C	ADE12	P80210	433 aa	Known RBP	4.95	□□□□□ -1.62
PEP7	YDR323C	THI72	Q08579	599 aa		4.95	□□□□□ -1.62
PEP7	YDR323C	YBL113C	Q7M4S9	792 aa		4.95	□□□□□ -1.62
PEP7	YDR323C	EBP2	P36049	427 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 76.1 ms