RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	SCRIB	Q14160	1630 aa		11.08	□□□□□ -0.64
CASC19-256	ENST00000641746	ZPR1	O75312	459 aa		11.07	□□□□□ -0.64
CASC19-256	ENST00000641746	EYA1	Q99502	592 aa		11.07	□□□□□ -0.64
CASC19-256	ENST00000641746	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.03	□□□□□ -0.64
CASC19-256	ENST00000641746	TRIM67	Q6ZTA4	783 aa		11.02	□□□□□ -0.65
CASC19-256	ENST00000641746	EMID1	Q96A84	441 aa	Predicted RBP	11.01	□□□□□ -0.65
CASC19-256	ENST00000641746	RNF223	E7ERA6	249 aa		11	□□□□□ -0.65
CASC19-256	ENST00000641746	SLC19A1	P41440	591 aa		11	□□□□□ -0.65
CASC19-256	ENST00000641746	SLC4A3	P48751	1232 aa		11	□□□□□ -0.65
CASC19-256	ENST00000641746	ZNF775	Q96BV0	537 aa	Predicted RBP	11	□□□□□ -0.65
CASC19-256	ENST00000641746	PRR14	Q9BWN1	585 aa		11	□□□□□ -0.65
CASC19-256	ENST00000641746	PCDHB3	Q9Y5E6	796 aa		11	□□□□□ -0.65
CASC19-256	ENST00000641746	BLOC1S3	Q6QNY0	202 aa		10.98	□□□□□ -0.65
CASC19-256	ENST00000641746	NES	P48681	1621 aa		10.97	□□□□□ -0.65
CASC19-256	ENST00000641746	SPRYD7	Q5W111	196 aa		10.95	□□□□□ -0.66
CASC19-256	ENST00000641746	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.95	□□□□□ -0.66
CASC19-256	ENST00000641746	CFAP44	Q96MT7	982 aa		10.95	□□□□□ -0.66
CASC19-256	ENST00000641746	MYT1	Q01538	1121 aa		10.93	□□□□□ -0.66
CASC19-256	ENST00000641746	ZNF598	Q86UK7	904 aa	Known RBP	10.93	□□□□□ -0.66
CASC19-256	ENST00000641746	THOC2	Q8NI27	1593 aa	Known RBP	10.93	□□□□□ -0.66
CASC19-256	ENST00000641746	DGAT1	O75907	488 aa		10.92	□□□□□ -0.66
CASC19-256	ENST00000641746	DNAJB2	P25686	324 aa		10.92	□□□□□ -0.66
CASC19-256	ENST00000641746	ANKLE1	Q8NAG6	615 aa		10.92	□□□□□ -0.66
CASC19-256	ENST00000641746	PRR20E	P86478	221 aa		10.91	□□□□□ -0.66
CASC19-256	ENST00000641746	PRR20C	P86479	221 aa		10.91	□□□□□ -0.66
CASC19-256	ENST00000641746	PRR20D	P86480	221 aa		10.91	□□□□□ -0.66
CASC19-256	ENST00000641746	PRR20B	P86481	221 aa		10.91	□□□□□ -0.66
CASC19-256	ENST00000641746	PRR20A	P86496	221 aa		10.91	□□□□□ -0.66
CASC19-256	ENST00000641746	PPEF1	O14829	653 aa	Predicted RBP	10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	ACTN4	O43707	911 aa	Known RBP	10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	TLL1	O43897	1013 aa		10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	MLLT3	P42568	568 aa	Predicted RBP	10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	PTGDR	Q13258	359 aa		10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	PKDCC	Q504Y2	493 aa		10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	LIAT1	Q6ZQX7	453 aa		10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	TMEM134	Q9H6X4	195 aa		10.9	□□□□□ -0.66
CASC19-256	ENST00000641746	POTEC	B2RU33	542 aa		10.88	□□□□□ -0.67
CASC19-256	ENST00000641746	S1PR4	O95977	384 aa		10.88	□□□□□ -0.67
CASC19-256	ENST00000641746	RBM46	Q8TBY0	533 aa	Known RBP	10.88	□□□□□ -0.67
CASC19-256	ENST00000641746	ADGRG1	Q9Y653	693 aa		10.88	□□□□□ -0.67
CASC19-256	ENST00000641746	KMT5B	Q4FZB7	885 aa		10.87	□□□□□ -0.67
CASC19-256	ENST00000641746	RCCD1	A6NED2	376 aa		10.86	□□□□□ -0.67
CASC19-256	ENST00000641746	GDF9	O60383	454 aa		10.86	□□□□□ -0.67
CASC19-256	ENST00000641746	CYB5RL	Q6IPT4	315 aa		10.86	□□□□□ -0.67
CASC19-256	ENST00000641746	ZNF697	Q5TEC3	545 aa		10.85	□□□□□ -0.67
CASC19-256	ENST00000641746	ARHGEF1	Q92888	912 aa	Known RBP	10.85	□□□□□ -0.67
CASC19-256	ENST00000641746	SMARCA2	P51531	1590 aa		10.85	□□□□□ -0.67
CASC19-256	ENST00000641746	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.85	□□□□□ -0.67
CASC19-256	ENST00000641746	RIMBP3C	A6NJZ7	1639 aa		10.84	□□□□□ -0.67
CASC19-256	ENST00000641746	RIMBP3B	A6NNM3	1639 aa		10.84	□□□□□ -0.67
CASC19-256	ENST00000641746	RIMBP3	Q9UFD9	1639 aa		10.84	□□□□□ -0.67
CASC19-256	ENST00000641746	ADH1B	P00325	375 aa		10.83	□□□□□ -0.68
CASC19-256	ENST00000641746	CFH	P08603	1231 aa		10.83	□□□□□ -0.68
CASC19-256	ENST00000641746	SLC10A3	P09131	477 aa		10.83	□□□□□ -0.68
CASC19-256	ENST00000641746	NCAPD3	P42695	1498 aa		10.82	□□□□□ -0.68
CASC19-256	ENST00000641746	FAM161A	Q3B820	660 aa		10.82	□□□□□ -0.68
CASC19-256	ENST00000641746	TNFRSF10A	O00220	468 aa		10.81	□□□□□ -0.68
CASC19-256	ENST00000641746	FAM187A	A6NFU0	413 aa		10.8	□□□□□ -0.68
CASC19-256	ENST00000641746	NR1I2	O75469	434 aa		10.8	□□□□□ -0.68
CASC19-256	ENST00000641746	PLA2G2C	Q5R387	149 aa		10.8	□□□□□ -0.68
CASC19-256	ENST00000641746	SCUBE3	Q8IX30	993 aa		10.79	□□□□□ -0.68
CASC19-256	ENST00000641746	SLC6A16	Q9GZN6	736 aa		10.79	□□□□□ -0.68
CASC19-256	ENST00000641746	NUTM2F	A1L443	756 aa		10.77	□□□□□ -0.69
CASC19-256	ENST00000641746	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.76	□□□□□ -0.69
CASC19-256	ENST00000641746	KCNV2	Q8TDN2	545 aa		10.76	□□□□□ -0.69
CASC19-256	ENST00000641746	AAAS	Q9NRG9	546 aa		10.76	□□□□□ -0.69
CASC19-256	ENST00000641746	PKD2L1	Q9P0L9	805 aa		10.75	□□□□□ -0.69
CASC19-256	ENST00000641746	ARHGEF11	O15085	1522 aa		10.74	□□□□□ -0.69
CASC19-256	ENST00000641746	ST8SIA5	O15466	376 aa		10.74	□□□□□ -0.69
CASC19-256	ENST00000641746	LCE2A	Q5TA79	106 aa	Predicted RBP	10.74	□□□□□ -0.69
CASC19-256	ENST00000641746	TREML4	Q6UXN2	200 aa		10.73	□□□□□ -0.69
CASC19-256	ENST00000641746	FCHSD2	O94868	740 aa		10.72	□□□□□ -0.69
CASC19-256	ENST00000641746	PXYLP1	Q8TE99	480 aa		10.72	□□□□□ -0.69
CASC19-256	ENST00000641746	SPSB2	Q99619	263 aa		10.72	□□□□□ -0.69
CASC19-256	ENST00000641746	PDS5B	Q9NTI5	1447 aa		10.72	□□□□□ -0.69
CASC19-256	ENST00000641746	OAT	P04181	439 aa		10.71	□□□□□ -0.69
CASC19-256	ENST00000641746	PUS10	Q3MIT2	529 aa	Known RBP	10.71	□□□□□ -0.69
CASC19-256	ENST00000641746	LMOD2	Q6P5Q4	547 aa		10.71	□□□□□ -0.69
CASC19-256	ENST00000641746	TSHZ2	Q9NRE2	1034 aa		10.7	□□□□□ -0.7
CASC19-256	ENST00000641746	DCAF1	Q9Y4B6	1507 aa		10.69	□□□□□ -0.7
CASC19-256	ENST00000641746	FOXC1	Q12948	553 aa		10.69	□□□□□ -0.7
CASC19-256	ENST00000641746	RPIA	P49247	311 aa		10.68	□□□□□ -0.7
CASC19-256	ENST00000641746	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.68	□□□□□ -0.7
CASC19-256	ENST00000641746	RSPH4A	Q5TD94	716 aa		10.68	□□□□□ -0.7
CASC19-256	ENST00000641746	CRIPAK	Q8N1N5	446 aa		10.68	□□□□□ -0.7
CASC19-256	ENST00000641746	KIF21A	Q7Z4S6	1674 aa		10.68	□□□□□ -0.7
CASC19-256	ENST00000641746	DACH1	Q9UI36	760 aa		10.67	□□□□□ -0.7
CASC19-256	ENST00000641746	ATAD2B	Q9ULI0	1458 aa		10.67	□□□□□ -0.7
CASC19-256	ENST00000641746	LAMC3	Q9Y6N6	1575 aa		10.66	□□□□□ -0.7
CASC19-256	ENST00000641746	METTL3	Q86U44	580 aa	Known RBP	10.66	□□□□□ -0.7
CASC19-256	ENST00000641746	TOR4A	Q9NXH8	423 aa		10.66	□□□□□ -0.7
CASC19-256	ENST00000641746	AVP	P01185	164 aa		10.65	□□□□□ -0.7
CASC19-256	ENST00000641746	MRC2	Q9UBG0	1479 aa		10.64	□□□□□ -0.71
CASC19-256	ENST00000641746	CD2BP2	O95400	341 aa	Known RBP	10.64	□□□□□ -0.71
CASC19-256	ENST00000641746	MORN1	Q5T089	497 aa		10.64	□□□□□ -0.71
CASC19-256	ENST00000641746	THAP11	Q96EK4	314 aa		10.64	□□□□□ -0.71
CASC19-256	ENST00000641746	RTN4	Q9NQC3	1192 aa	Known RBP	10.64	□□□□□ -0.71
CASC19-256	ENST00000641746	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.63	□□□□□ -0.71
CASC19-256	ENST00000641746	SEMA3E	O15041	775 aa		10.62	□□□□□ -0.71
CASC19-256	ENST00000641746	HIC1	Q14526	733 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms