RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 NPM2Q86SE8 214 aaKnown RBP22.3■■□□□ 1.16
PHGDH-223ENST00000641597 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
PHGDH-223ENST00000641597 ADGRL1O94910 1474 aa22.29■■□□□ 1.16
PHGDH-223ENST00000641597 NBR1Q14596 966 aa22.29■■□□□ 1.16
PHGDH-223ENST00000641597 WDR43Q15061 677 aaKnown RBP eCLIP22.28■■□□□ 1.16
PHGDH-223ENST00000641597 DEPDC5O75140 1603 aa22.28■■□□□ 1.16
PHGDH-223ENST00000641597 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
PHGDH-223ENST00000641597 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
PHGDH-223ENST00000641597 TET3O43151 1660 aa22.26■■□□□ 1.15
PHGDH-223ENST00000641597 KANK1Q14678 1352 aa22.26■■□□□ 1.15
PHGDH-223ENST00000641597 INO80Q9ULG1 1556 aaPredicted RBP22.26■■□□□ 1.15
PHGDH-223ENST00000641597 CFAP65Q6ZU64 1925 aaKnown RBP22.26■■□□□ 1.15
PHGDH-223ENST00000641597 ZMYM4Q5VZL5 1548 aa22.26■■□□□ 1.15
PHGDH-223ENST00000641597 MYOM1P52179 1685 aa22.25■■□□□ 1.15
PHGDH-223ENST00000641597 CARD14Q9BXL6 1004 aa22.25■■□□□ 1.15
PHGDH-223ENST00000641597 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
PHGDH-223ENST00000641597 MROH1Q8NDA8 1641 aa22.24■■□□□ 1.15
PHGDH-223ENST00000641597 SPINK5Q9NQ38 1064 aaPredicted RBP22.24■■□□□ 1.15
PHGDH-223ENST00000641597 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
PHGDH-223ENST00000641597 DUSP27Q5VZP5 1158 aa22.23■■□□□ 1.15
PHGDH-223ENST00000641597 ANP32AP39687 249 aaKnown RBP22.22■■□□□ 1.15
PHGDH-223ENST00000641597 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
PHGDH-223ENST00000641597 ASXL1Q8IXJ9 1541 aa22.21■■□□□ 1.15
PHGDH-223ENST00000641597 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
PHGDH-223ENST00000641597 IPO9Q96P70 1041 aaKnown RBP22.21■■□□□ 1.15
PHGDH-223ENST00000641597 SYNMO15061 1565 aa22.21■■□□□ 1.15
PHGDH-223ENST00000641597 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
PHGDH-223ENST00000641597 ABCA6Q8N139 1617 aa22.2■■□□□ 1.14
PHGDH-223ENST00000641597 CDCA8Q53HL2 280 aa22.2■■□□□ 1.14
PHGDH-223ENST00000641597 GGT6Q6P531 493 aa22.2■■□□□ 1.14
PHGDH-223ENST00000641597 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.14
PHGDH-223ENST00000641597 APAF1O14727 1248 aa22.19■■□□□ 1.14
PHGDH-223ENST00000641597 PDE4AP27815 886 aa22.19■■□□□ 1.14
PHGDH-223ENST00000641597 TNNT2P45379 298 aaPredicted RBP22.19■■□□□ 1.14
PHGDH-223ENST00000641597 ERVK-7P63135 1459 aa22.19■■□□□ 1.14
PHGDH-223ENST00000641597 TMEM132EQ6IEE7 984 aa22.18■■□□□ 1.14
PHGDH-223ENST00000641597 TRAK1Q9UPV9 953 aa22.18■■□□□ 1.14
PHGDH-223ENST00000641597 MROH2AA6NES4 1674 aa22.18■■□□□ 1.14
PHGDH-223ENST00000641597 ZNF521Q96K83 1311 aa22.17■■□□□ 1.14
PHGDH-223ENST00000641597 KIDINS220Q9ULH0 1771 aa22.16■■□□□ 1.14
PHGDH-223ENST00000641597 PPRC1Q5VV67 1664 aaKnown RBP22.16■■□□□ 1.14
PHGDH-223ENST00000641597 EIF3AQ14152 1382 aaKnown RBP22.16■■□□□ 1.14
PHGDH-223ENST00000641597 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
PHGDH-223ENST00000641597 MAP3K4Q9Y6R4 1608 aa22.15■■□□□ 1.14
PHGDH-223ENST00000641597 NOS1P29475 1434 aa22.15■■□□□ 1.14
PHGDH-223ENST00000641597 INSRP06213 1382 aa22.14■■□□□ 1.13
PHGDH-223ENST00000641597 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
PHGDH-223ENST00000641597 KDM5AP29375 1690 aaKnown RBP22.14■■□□□ 1.13
PHGDH-223ENST00000641597 BACH2Q9BYV9 841 aa22.12■■□□□ 1.13
PHGDH-223ENST00000641597 BCL11AQ9H165 835 aa22.12■■□□□ 1.13
PHGDH-223ENST00000641597 ZBTB47Q9UFB7 747 aaPredicted RBP22.12■■□□□ 1.13
PHGDH-223ENST00000641597 EFCAB6Q5THR3 1501 aa22.12■■□□□ 1.13
PHGDH-223ENST00000641597 SLC12A5Q9H2X9 1139 aa22.12■■□□□ 1.13
PHGDH-223ENST00000641597 SLFN5Q08AF3 891 aa22.11■■□□□ 1.13
PHGDH-223ENST00000641597 PIK3C2GO75747 1445 aa22.11■■□□□ 1.13
PHGDH-223ENST00000641597 KIF1BO60333 1816 aa22.1■■□□□ 1.13
PHGDH-223ENST00000641597 BCAR3O75815 825 aa22.1■■□□□ 1.13
PHGDH-223ENST00000641597 STAC3Q96MF2 364 aa22.1■■□□□ 1.13
PHGDH-223ENST00000641597 NEUROD2Q15784 382 aa22.08■■□□□ 1.12
PHGDH-223ENST00000641597 MYOM2P54296 1465 aa22.07■■□□□ 1.12
PHGDH-223ENST00000641597 RAPGEF3O95398 923 aa22.07■■□□□ 1.12
PHGDH-223ENST00000641597 NPATQ14207 1427 aa22.07■■□□□ 1.12
PHGDH-223ENST00000641597 RRP7AQ9Y3A4 280 aaKnown RBP22.06■■□□□ 1.12
PHGDH-223ENST00000641597 KIAA1210Q9ULL0 1709 aa22.06■■□□□ 1.12
PHGDH-223ENST00000641597 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-223ENST00000641597 IFT172Q9UG01 1749 aa22.05■■□□□ 1.12
PHGDH-223ENST00000641597 DEKP35659 375 aaKnown RBP22.04■■□□□ 1.12
PHGDH-223ENST00000641597 SAFB2Q14151 953 aaKnown RBP eCLIP22.04■■□□□ 1.12
PHGDH-223ENST00000641597 KDM2BQ8NHM5 1336 aa22.04■■□□□ 1.12
PHGDH-223ENST00000641597 NPC1L1Q9UHC9 1359 aa22.03■■□□□ 1.12
PHGDH-223ENST00000641597 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
PHGDH-223ENST00000641597 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
PHGDH-223ENST00000641597 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
PHGDH-223ENST00000641597 FRMPD1Q5SYB0 1578 aa22.02■■□□□ 1.12
PHGDH-223ENST00000641597 NPM1P06748 294 aaKnown RBP eCLIP22.01■■□□□ 1.11
PHGDH-223ENST00000641597 TRMT2AQ8IZ69 625 aaKnown RBP22.01■■□□□ 1.11
PHGDH-223ENST00000641597 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
PHGDH-223ENST00000641597 NRXN1Q9ULB1 1477 aa22■■□□□ 1.11
PHGDH-223ENST00000641597 MS4A1P11836 297 aa22■■□□□ 1.11
PHGDH-223ENST00000641597 ADGRB3O60242 1522 aa22■■□□□ 1.11
PHGDH-223ENST00000641597 MORC1Q86VD1 984 aa21.99■■□□□ 1.11
PHGDH-223ENST00000641597 C14orf93Q9H972 538 aaKnown RBP21.99■■□□□ 1.11
PHGDH-223ENST00000641597 RGS3P49796 1198 aa21.98■■□□□ 1.11
PHGDH-223ENST00000641597 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
PHGDH-223ENST00000641597 POGZQ7Z3K3 1410 aa21.97■■□□□ 1.11
PHGDH-223ENST00000641597 SLC4A3P48751 1232 aa21.96■■□□□ 1.11
PHGDH-223ENST00000641597 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
PHGDH-223ENST00000641597 WWC1Q8IX03 1113 aa21.95■■□□□ 1.11
PHGDH-223ENST00000641597 NEURL4Q96JN8 1562 aa21.95■■□□□ 1.1
PHGDH-223ENST00000641597 ADGRB1O14514 1584 aa21.94■■□□□ 1.1
PHGDH-223ENST00000641597 LMTK2Q8IWU2 1503 aa21.94■■□□□ 1.1
PHGDH-223ENST00000641597 PANK1Q8TE04 598 aa21.94■■□□□ 1.1
PHGDH-223ENST00000641597 CABP2Q9NPB3 220 aa21.94■■□□□ 1.1
PHGDH-223ENST00000641597 MTHFSP49914 203 aa21.93■■□□□ 1.1
PHGDH-223ENST00000641597 STK26Q9P289 416 aa21.93■■□□□ 1.1
PHGDH-223ENST00000641597 QRICH2Q9H0J4 1663 aa21.93■■□□□ 1.1
PHGDH-223ENST00000641597 PPLO60437 1756 aa21.93■■□□□ 1.1
PHGDH-223ENST00000641597 E9PSI1 815 aa21.93■■□□□ 1.1
PHGDH-223ENST00000641597 CENPQQ7L2Z9 268 aaPredicted RBP21.93■■□□□ 1.1
PHGDH-223ENST00000641597 TNNQ9UQP3 1299 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms