RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 GCC2Q8IWJ2 1684 aa15.61■□□□□ 0.09
PHGDH-222ENST00000641587 ADGRL2O95490 1459 aa15.61■□□□□ 0.09
PHGDH-222ENST00000641587 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
PHGDH-222ENST00000641587 BCANQ96GW7 911 aa15.59■□□□□ 0.09
PHGDH-222ENST00000641587 SETD1AO15047 1707 aaKnown RBP15.59■□□□□ 0.09
PHGDH-222ENST00000641587 PHLPP1O60346 1717 aa15.59■□□□□ 0.09
PHGDH-222ENST00000641587 CHD2O14647 1828 aaKnown RBP15.58■□□□□ 0.08
PHGDH-222ENST00000641587 FAM50AQ14320 339 aaKnown RBP15.57■□□□□ 0.08
PHGDH-222ENST00000641587 MSH6P52701 1360 aa15.57■□□□□ 0.08
PHGDH-222ENST00000641587 TMEM131LA2VDJ0 1609 aa15.57■□□□□ 0.08
PHGDH-222ENST00000641587 SLC52A1Q9NWF4 448 aa15.56■□□□□ 0.08
PHGDH-222ENST00000641587 ANKRD50Q9ULJ7 1429 aa15.56■□□□□ 0.08
PHGDH-222ENST00000641587 RIMS2Q9UQ26 1411 aa15.56■□□□□ 0.08
PHGDH-222ENST00000641587 RPRD2Q5VT52 1461 aaKnown RBP15.56■□□□□ 0.08
PHGDH-222ENST00000641587 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
PHGDH-222ENST00000641587 COL16A1Q07092 1604 aaPredicted RBP15.54■□□□□ 0.08
PHGDH-222ENST00000641587 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-222ENST00000641587 NUTM2DQ5VT03 806 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-222ENST00000641587 SLAIN2Q9P270 581 aa15.53■□□□□ 0.08
PHGDH-222ENST00000641587 UNC13BO14795 1591 aa15.53■□□□□ 0.08
PHGDH-222ENST00000641587 E9PCH4 1651 aa15.52■□□□□ 0.08
PHGDH-222ENST00000641587 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
PHGDH-222ENST00000641587 ADAMTS13Q76LX8 1427 aa15.51■□□□□ 0.07
PHGDH-222ENST00000641587 LRP6O75581 1613 aa15.5■□□□□ 0.07
PHGDH-222ENST00000641587 JCADQ9P266 1359 aa15.5■□□□□ 0.07
PHGDH-222ENST00000641587 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-222ENST00000641587 C14orf37Q86TY3 774 aa15.47■□□□□ 0.07
PHGDH-222ENST00000641587 TBX22Q9Y458 520 aa15.47■□□□□ 0.07
PHGDH-222ENST00000641587 IQGAP3Q86VI3 1631 aa15.46■□□□□ 0.06
PHGDH-222ENST00000641587 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
PHGDH-222ENST00000641587 PTPRUQ92729 1446 aa15.45■□□□□ 0.06
PHGDH-222ENST00000641587 AHDC1Q5TGY3 1603 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-222ENST00000641587 NCOA3Q9Y6Q9 1424 aa15.43■□□□□ 0.06
PHGDH-222ENST00000641587 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
PHGDH-222ENST00000641587 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.43■□□□□ 0.06
PHGDH-222ENST00000641587 SHPRHQ149N8 1683 aa15.43■□□□□ 0.06
PHGDH-222ENST00000641587 NRXN3Q9Y4C0 1643 aa15.42■□□□□ 0.06
PHGDH-222ENST00000641587 TRPM2O94759 1503 aa15.42■□□□□ 0.06
PHGDH-222ENST00000641587 MEX3CQ5U5Q3 659 aaKnown RBP15.41■□□□□ 0.06
PHGDH-222ENST00000641587 SPATA31A6Q5VVP1 1343 aa15.41■□□□□ 0.06
PHGDH-222ENST00000641587 PIK3R4Q99570 1358 aa15.4■□□□□ 0.06
PHGDH-222ENST00000641587 ATF3P18847 181 aa15.4■□□□□ 0.06
PHGDH-222ENST00000641587 CADPS2Q86UW7 1296 aa15.4■□□□□ 0.06
PHGDH-222ENST00000641587 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
PHGDH-222ENST00000641587 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
PHGDH-222ENST00000641587 AMOTL2Q9Y2J4 779 aa15.4■□□□□ 0.06
PHGDH-222ENST00000641587 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
PHGDH-222ENST00000641587 NUP155O75694 1391 aa15.39■□□□□ 0.05
PHGDH-222ENST00000641587 ROCK1Q13464 1354 aa15.39■□□□□ 0.05
PHGDH-222ENST00000641587 BRINP3Q76B58 766 aa15.39■□□□□ 0.05
PHGDH-222ENST00000641587 ITGAEP38570 1179 aa15.38■□□□□ 0.05
PHGDH-222ENST00000641587 ASXL1Q8IXJ9 1541 aa15.38■□□□□ 0.05
PHGDH-222ENST00000641587 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
PHGDH-222ENST00000641587 NUTM2BA6NNL0 878 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-222ENST00000641587 NUTM2EB1AL46 878 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-222ENST00000641587 NUTM2AQ8IVF1 878 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-222ENST00000641587 SETBP1Q9Y6X0 1596 aa15.36■□□□□ 0.05
PHGDH-222ENST00000641587 ZNF772Q68DY9 489 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-222ENST00000641587 UPF1Q92900 1129 aaKnown RBP eCLIP15.35■□□□□ 0.05
PHGDH-222ENST00000641587 NHSL1Q5SYE7 1610 aa15.35■□□□□ 0.05
PHGDH-222ENST00000641587 MST1RQ04912 1400 aa15.34■□□□□ 0.05
PHGDH-222ENST00000641587 METP08581 1390 aa15.34■□□□□ 0.05
PHGDH-222ENST00000641587 DCCP43146 1447 aa15.34■□□□□ 0.05
PHGDH-222ENST00000641587 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.04
PHGDH-222ENST00000641587 DDX17Q92841 729 aaKnown RBP15.33■□□□□ 0.04
PHGDH-222ENST00000641587 NALCNQ8IZF0 1738 aa15.33■□□□□ 0.04
PHGDH-222ENST00000641587 CLTCL1P53675 1640 aa15.32■□□□□ 0.04
PHGDH-222ENST00000641587 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
PHGDH-222ENST00000641587 AFF2P51816 1311 aa15.31■□□□□ 0.04
PHGDH-222ENST00000641587 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
PHGDH-222ENST00000641587 NEXMIFQ5QGS0 1516 aa15.31■□□□□ 0.04
PHGDH-222ENST00000641587 RXRBP28702 533 aa15.3■□□□□ 0.04
PHGDH-222ENST00000641587 ADGRL3Q9HAR2 1447 aa15.29■□□□□ 0.04
PHGDH-222ENST00000641587 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
PHGDH-222ENST00000641587 C8orf37Q96NL8 207 aa15.27■□□□□ 0.04
PHGDH-222ENST00000641587 CDK12Q9NYV4 1490 aaPredicted RBP15.27■□□□□ 0.03
PHGDH-222ENST00000641587 RGS12O14924 1447 aa15.26■□□□□ 0.03
PHGDH-222ENST00000641587 KIF1BO60333 1816 aa15.24■□□□□ 0.03
PHGDH-222ENST00000641587 LRRC59Q96AG4 307 aaKnown RBP15.24■□□□□ 0.03
PHGDH-222ENST00000641587 C1orf167Q5SNV9 1468 aa15.23■□□□□ 0.03
PHGDH-222ENST00000641587 ADAMTS2O95450 1211 aa15.22■□□□□ 0.03
PHGDH-222ENST00000641587 ROBO2Q9HCK4 1378 aa15.22■□□□□ 0.03
PHGDH-222ENST00000641587 QTRT2Q9H974 415 aaKnown RBP15.21■□□□□ 0.03
PHGDH-222ENST00000641587 SRCAPQ6ZRS2 3230 aa15.21■□□□□ 0.03
PHGDH-222ENST00000641587 LAMC1P11047 1609 aa15.21■□□□□ 0.02
PHGDH-222ENST00000641587 PTCH1Q13635 1447 aa15.2■□□□□ 0.02
PHGDH-222ENST00000641587 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
PHGDH-222ENST00000641587 NAIPQ13075 1403 aa15.19■□□□□ 0.02
PHGDH-222ENST00000641587 RBM6P78332 1123 aaKnown RBP15.18■□□□□ 0.02
PHGDH-222ENST00000641587 NGLY1Q96IV0 654 aa15.17■□□□□ 0.02
PHGDH-222ENST00000641587 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-222ENST00000641587 PPLO60437 1756 aa15.16■□□□□ 0.02
PHGDH-222ENST00000641587 EP400Q96L91 3159 aa15.15■□□□□ 0.02
PHGDH-222ENST00000641587 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
PHGDH-222ENST00000641587 PRAG1Q86YV5 1406 aa15.14■□□□□ 0.01
PHGDH-222ENST00000641587 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-222ENST00000641587 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-222ENST00000641587 USP21Q9UK80 565 aa15.13■□□□□ 0.01
PHGDH-222ENST00000641587 HFM1A2PYH4 1435 aa15.11■□□□□ 0.01
PHGDH-222ENST00000641587 MYOM2P54296 1465 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms