RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
SPIN3-239ENST00000640463 DEKP35659 375 aaKnown RBP18.4■□□□□ 0.54
SPIN3-239ENST00000640463 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
SPIN3-239ENST00000640463 CEP152O94986 1710 aa18.39■□□□□ 0.53
SPIN3-239ENST00000640463 INSRP06213 1382 aa18.38■□□□□ 0.53
SPIN3-239ENST00000640463 UHRF1BP1LA0JNW5 1464 aa18.37■□□□□ 0.53
SPIN3-239ENST00000640463 PTPRTO14522 1441 aa18.37■□□□□ 0.53
SPIN3-239ENST00000640463 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
SPIN3-239ENST00000640463 BACH2Q9BYV9 841 aa18.37■□□□□ 0.53
SPIN3-239ENST00000640463 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
SPIN3-239ENST00000640463 UGGT1Q9NYU2 1555 aa18.36■□□□□ 0.53
SPIN3-239ENST00000640463 RTEL1-TNFRSF6BF6WH68 1400 aa18.36■□□□□ 0.53
SPIN3-239ENST00000640463 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
SPIN3-239ENST00000640463 CLASP1Q7Z460 1538 aa18.35■□□□□ 0.53
SPIN3-239ENST00000640463 KANK1Q14678 1352 aa18.35■□□□□ 0.53
SPIN3-239ENST00000640463 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
SPIN3-239ENST00000640463 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
SPIN3-239ENST00000640463 SYNMO15061 1565 aa18.34■□□□□ 0.53
SPIN3-239ENST00000640463 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
SPIN3-239ENST00000640463 FANCAO15360 1455 aa18.33■□□□□ 0.52
SPIN3-239ENST00000640463 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
SPIN3-239ENST00000640463 TET3O43151 1660 aa18.32■□□□□ 0.52
SPIN3-239ENST00000640463 MS4A1P11836 297 aa18.32■□□□□ 0.52
SPIN3-239ENST00000640463 MYOM1P52179 1685 aa18.32■□□□□ 0.52
SPIN3-239ENST00000640463 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
SPIN3-239ENST00000640463 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
SPIN3-239ENST00000640463 APAF1O14727 1248 aa18.31■□□□□ 0.52
SPIN3-239ENST00000640463 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
SPIN3-239ENST00000640463 EIF3AQ14152 1382 aaKnown RBP18.31■□□□□ 0.52
SPIN3-239ENST00000640463 CHGAP10645 457 aaKnown RBP18.29■□□□□ 0.52
SPIN3-239ENST00000640463 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
SPIN3-239ENST00000640463 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
SPIN3-239ENST00000640463 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
SPIN3-239ENST00000640463 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
SPIN3-239ENST00000640463 SLFN5Q08AF3 891 aa18.28■□□□□ 0.52
SPIN3-239ENST00000640463 PIK3C2GO75747 1445 aa18.27■□□□□ 0.52
SPIN3-239ENST00000640463 KDM5AP29375 1690 aaKnown RBP18.27■□□□□ 0.52
SPIN3-239ENST00000640463 INO80Q9ULG1 1556 aaPredicted RBP18.27■□□□□ 0.51
SPIN3-239ENST00000640463 RTL5Q5HYW3 569 aaPredicted RBP18.27■□□□□ 0.51
SPIN3-239ENST00000640463 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
SPIN3-239ENST00000640463 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
SPIN3-239ENST00000640463 CFAP65Q6ZU64 1925 aaKnown RBP18.26■□□□□ 0.51
SPIN3-239ENST00000640463 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
SPIN3-239ENST00000640463 KDM2BQ8NHM5 1336 aa18.25■□□□□ 0.51
SPIN3-239ENST00000640463 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
SPIN3-239ENST00000640463 ABCA6Q8N139 1617 aa18.25■□□□□ 0.51
SPIN3-239ENST00000640463 BCAR3O75815 825 aa18.24■□□□□ 0.51
SPIN3-239ENST00000640463 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
SPIN3-239ENST00000640463 ABCA9Q8IUA7 1624 aa18.24■□□□□ 0.51
SPIN3-239ENST00000640463 MAP3K4Q9Y6R4 1608 aa18.24■□□□□ 0.51
SPIN3-239ENST00000640463 MROH1Q8NDA8 1641 aa18.23■□□□□ 0.51
SPIN3-239ENST00000640463 TRAK1Q9UPV9 953 aa18.23■□□□□ 0.51
SPIN3-239ENST00000640463 NPC1L1Q9UHC9 1359 aa18.22■□□□□ 0.51
SPIN3-239ENST00000640463 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.22■□□□□ 0.51
SPIN3-239ENST00000640463 KIF1BO60333 1816 aa18.22■□□□□ 0.51
SPIN3-239ENST00000640463 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
SPIN3-239ENST00000640463 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.51
SPIN3-239ENST00000640463 MROH2AA6NES4 1674 aa18.21■□□□□ 0.5
SPIN3-239ENST00000640463 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.5
SPIN3-239ENST00000640463 RGS3P49796 1198 aa18.2■□□□□ 0.5
SPIN3-239ENST00000640463 NOS1P29475 1434 aa18.19■□□□□ 0.5
SPIN3-239ENST00000640463 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
SPIN3-239ENST00000640463 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
SPIN3-239ENST00000640463 GGT6Q6P531 493 aa18.19■□□□□ 0.5
SPIN3-239ENST00000640463 MYOM2P54296 1465 aa18.18■□□□□ 0.5
SPIN3-239ENST00000640463 SLC4A3P48751 1232 aa18.18■□□□□ 0.5
SPIN3-239ENST00000640463 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
SPIN3-239ENST00000640463 PPRC1Q5VV67 1664 aaKnown RBP18.18■□□□□ 0.5
SPIN3-239ENST00000640463 ASXL2Q76L83 1435 aa18.18■□□□□ 0.5
SPIN3-239ENST00000640463 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-239ENST00000640463 EFCAB6Q5THR3 1501 aa18.17■□□□□ 0.5
SPIN3-239ENST00000640463 NKTRP30414 1462 aaKnown RBP18.17■□□□□ 0.5
SPIN3-239ENST00000640463 NEFMP07197 916 aa18.17■□□□□ 0.5
SPIN3-239ENST00000640463 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-239ENST00000640463 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
SPIN3-239ENST00000640463 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
SPIN3-239ENST00000640463 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
SPIN3-239ENST00000640463 E9PSI1 815 aa18.16■□□□□ 0.5
SPIN3-239ENST00000640463 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
SPIN3-239ENST00000640463 IFT172Q9UG01 1749 aa18.14■□□□□ 0.49
SPIN3-239ENST00000640463 NSD3Q9BZ95 1437 aa18.14■□□□□ 0.49
SPIN3-239ENST00000640463 SLC24A1O60721 1099 aa18.13■□□□□ 0.49
SPIN3-239ENST00000640463 C8orf34Q49A92 452 aa18.13■□□□□ 0.49
SPIN3-239ENST00000640463 WWC1Q8IX03 1113 aa18.12■□□□□ 0.49
SPIN3-239ENST00000640463 NEURL4Q96JN8 1562 aa18.12■□□□□ 0.49
SPIN3-239ENST00000640463 FAM161AQ3B820 660 aa18.11■□□□□ 0.49
SPIN3-239ENST00000640463 IGHDP01880 384 aa18.11■□□□□ 0.49
SPIN3-239ENST00000640463 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
SPIN3-239ENST00000640463 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
SPIN3-239ENST00000640463 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
SPIN3-239ENST00000640463 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
SPIN3-239ENST00000640463 NPATQ14207 1427 aa18.1■□□□□ 0.49
SPIN3-239ENST00000640463 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
SPIN3-239ENST00000640463 COG6Q9Y2V7 657 aa18.09■□□□□ 0.49
SPIN3-239ENST00000640463 POLR3AO14802 1390 aaPredicted RBP18.09■□□□□ 0.49
SPIN3-239ENST00000640463 C14orf93Q9H972 538 aaKnown RBP18.09■□□□□ 0.49
SPIN3-239ENST00000640463 ADGRB3O60242 1522 aa18.08■□□□□ 0.48
SPIN3-239ENST00000640463 ZNF518AQ6AHZ1 1483 aa18.08■□□□□ 0.48
SPIN3-239ENST00000640463 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
SPIN3-239ENST00000640463 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms