RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 FCHSD2O94868 740 aa11.2□□□□□ -0.62
ATM-229ENST00000639953 IL21Q9HBE4 155 aa11.2□□□□□ -0.62
ATM-229ENST00000639953 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
ATM-229ENST00000639953 RCCD1A6NED2 376 aa11.18□□□□□ -0.62
ATM-229ENST00000639953 COPS2P61201 443 aa11.18□□□□□ -0.62
ATM-229ENST00000639953 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
ATM-229ENST00000639953 IRX2Q9BZI1 471 aaPredicted RBP11.18□□□□□ -0.62
ATM-229ENST00000639953 DNAJB2P25686 324 aa11.17□□□□□ -0.62
ATM-229ENST00000639953 FECHP22830 423 aa11.16□□□□□ -0.62
ATM-229ENST00000639953 PPP1R18Q6NYC8 613 aa11.15□□□□□ -0.62
ATM-229ENST00000639953 TMEM134Q9H6X4 195 aa11.15□□□□□ -0.62
ATM-229ENST00000639953 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
ATM-229ENST00000639953 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
ATM-229ENST00000639953 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
ATM-229ENST00000639953 HIC1Q14526 733 aa11.11□□□□□ -0.63
ATM-229ENST00000639953 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
ATM-229ENST00000639953 SLC10A3P09131 477 aa11.1□□□□□ -0.63
ATM-229ENST00000639953 GPR37O15354 613 aa11.09□□□□□ -0.63
ATM-229ENST00000639953 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
ATM-229ENST00000639953 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
ATM-229ENST00000639953 PCDHB3Q9Y5E6 796 aa11.09□□□□□ -0.63
ATM-229ENST00000639953 EIF4G1Q04637 1599 aaKnown RBP11.08□□□□□ -0.64
ATM-229ENST00000639953 ZPR1O75312 459 aa11.08□□□□□ -0.64
ATM-229ENST00000639953 OATP04181 439 aa11.08□□□□□ -0.64
ATM-229ENST00000639953 GNPATO15228 680 aa11.07□□□□□ -0.64
ATM-229ENST00000639953 PRKD2Q9BZL6 878 aa11.07□□□□□ -0.64
ATM-229ENST00000639953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
ATM-229ENST00000639953 METTL3Q86U44 580 aaKnown RBP11.06□□□□□ -0.64
ATM-229ENST00000639953 CFHP08603 1231 aa11.05□□□□□ -0.64
ATM-229ENST00000639953 CC2D2AQ9P2K1 1620 aa11.05□□□□□ -0.64
ATM-229ENST00000639953 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
ATM-229ENST00000639953 PRR14Q9BWN1 585 aa11.04□□□□□ -0.64
ATM-229ENST00000639953 ACTN4O43707 911 aaKnown RBP11.03□□□□□ -0.64
ATM-229ENST00000639953 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
ATM-229ENST00000639953 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
ATM-229ENST00000639953 TLL1O43897 1013 aa11□□□□□ -0.65
ATM-229ENST00000639953 PHOX2BQ99453 314 aa11□□□□□ -0.65
ATM-229ENST00000639953 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
ATM-229ENST00000639953 GFRA3O60609 400 aa10.99□□□□□ -0.65
ATM-229ENST00000639953 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
ATM-229ENST00000639953 Q6ZNB5 142 aa10.98□□□□□ -0.65
ATM-229ENST00000639953 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
ATM-229ENST00000639953 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
ATM-229ENST00000639953 GGCXP38435 758 aa10.97□□□□□ -0.65
ATM-229ENST00000639953 DAXXQ9UER7 740 aaPredicted RBP10.97□□□□□ -0.65
ATM-229ENST00000639953 V9GY48 417 aaPredicted RBP10.97□□□□□ -0.65
ATM-229ENST00000639953 RNF223E7ERA6 249 aa10.96□□□□□ -0.65
ATM-229ENST00000639953 TMUB1Q9BVT8 246 aa10.96□□□□□ -0.65
ATM-229ENST00000639953 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
ATM-229ENST00000639953 DDX11L8A8MPP1 907 aa10.94□□□□□ -0.66
ATM-229ENST00000639953 S1PR4O95977 384 aa10.93□□□□□ -0.66
ATM-229ENST00000639953 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
ATM-229ENST00000639953 RDH13Q8NBN7 331 aa10.93□□□□□ -0.66
ATM-229ENST00000639953 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
ATM-229ENST00000639953 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
ATM-229ENST00000639953 NR1I2O75469 434 aa10.92□□□□□ -0.66
ATM-229ENST00000639953 LCE2BO14633 110 aa10.91□□□□□ -0.66
ATM-229ENST00000639953 ADH1BP00325 375 aa10.89□□□□□ -0.67
ATM-229ENST00000639953 SLC19A1P41440 591 aa10.89□□□□□ -0.67
ATM-229ENST00000639953 LAPTM4AQ15012 233 aa10.89□□□□□ -0.67
ATM-229ENST00000639953 BAZ1AQ9NRL2 1556 aaPredicted RBP10.89□□□□□ -0.67
ATM-229ENST00000639953 FUT2Q10981 343 aa10.88□□□□□ -0.67
ATM-229ENST00000639953 MROH2BQ7Z745 1585 aa10.87□□□□□ -0.67
ATM-229ENST00000639953 GCGRP47871 477 aa10.87□□□□□ -0.67
ATM-229ENST00000639953 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
ATM-229ENST00000639953 SLC6A16Q9GZN6 736 aa10.87□□□□□ -0.67
ATM-229ENST00000639953 MORN1Q5T089 497 aa10.86□□□□□ -0.67
ATM-229ENST00000639953 SPSB2Q99619 263 aa10.86□□□□□ -0.67
ATM-229ENST00000639953 PDZRN3Q9UPQ7 1066 aa10.86□□□□□ -0.67
ATM-229ENST00000639953 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
ATM-229ENST00000639953 IRF6O14896 467 aa10.85□□□□□ -0.67
ATM-229ENST00000639953 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
ATM-229ENST00000639953 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
ATM-229ENST00000639953 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
ATM-229ENST00000639953 MAP2K5Q13163 448 aa10.84□□□□□ -0.67
ATM-229ENST00000639953 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
ATM-229ENST00000639953 SLC27A5Q9Y2P5 690 aa10.84□□□□□ -0.67
ATM-229ENST00000639953 ATAD2BQ9ULI0 1458 aa10.83□□□□□ -0.68
ATM-229ENST00000639953 SPRYD7Q5W111 196 aa10.83□□□□□ -0.68
ATM-229ENST00000639953 TRIM67Q6ZTA4 783 aa10.83□□□□□ -0.68
ATM-229ENST00000639953 SULF1Q8IWU6 871 aa10.83□□□□□ -0.68
ATM-229ENST00000639953 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
ATM-229ENST00000639953 THAP11Q96EK4 314 aa10.82□□□□□ -0.68
ATM-229ENST00000639953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.81□□□□□ -0.68
ATM-229ENST00000639953 FAM160A2Q8N612 972 aaPredicted RBP10.8□□□□□ -0.68
ATM-229ENST00000639953 SMARCA2P51531 1590 aa10.8□□□□□ -0.68
ATM-229ENST00000639953 MINK1Q8N4C8 1332 aaPredicted RBP10.8□□□□□ -0.68
ATM-229ENST00000639953 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
ATM-229ENST00000639953 MDM2Q00987 491 aaPredicted RBP10.79□□□□□ -0.68
ATM-229ENST00000639953 ZNF598Q86UK7 904 aaKnown RBP10.79□□□□□ -0.68
ATM-229ENST00000639953 WIZO95785 1651 aa10.79□□□□□ -0.68
ATM-229ENST00000639953 CD46P15529 392 aa10.78□□□□□ -0.68
ATM-229ENST00000639953 PEG3Q9GZU2 1588 aa10.77□□□□□ -0.68
ATM-229ENST00000639953 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
ATM-229ENST00000639953 BRICD5Q6PL45 260 aa10.77□□□□□ -0.69
ATM-229ENST00000639953 ZNF697Q5TEC3 545 aa10.76□□□□□ -0.69
ATM-229ENST00000639953 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
ATM-229ENST00000639953 CCDC102AQ96A19 550 aa10.76□□□□□ -0.69
ATM-229ENST00000639953 HMGXB3Q12766 1538 aa10.75□□□□□ -0.69
ATM-229ENST00000639953 PRDM9Q9NQV7 894 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms