RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-259ENST00000639406 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-259ENST00000639406 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
KCNMA1-259ENST00000639406 C22orf23Q9BZE7 217 aa13.23□□□□□ -0.29
KCNMA1-259ENST00000639406 CCP110O43303 1012 aa13.22□□□□□ -0.29
KCNMA1-259ENST00000639406 ZRSR2Q15696 482 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-259ENST00000639406 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
KCNMA1-259ENST00000639406 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
KCNMA1-259ENST00000639406 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
KCNMA1-259ENST00000639406 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
KCNMA1-259ENST00000639406 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
KCNMA1-259ENST00000639406 TNNT1P13805 278 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 ANKRD20A12PQ8NF67 263 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 CENPHQ9H3R5 247 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 TRIM5Q9C035 493 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 SMARCA2P51531 1590 aa13.21□□□□□ -0.29
KCNMA1-259ENST00000639406 GOLGA6L7A0A1B0GV03 622 aa13.21□□□□□ -0.3
KCNMA1-259ENST00000639406 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.3
KCNMA1-259ENST00000639406 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.3
KCNMA1-259ENST00000639406 CCDC146Q8IYE0 955 aa13.21□□□□□ -0.3
KCNMA1-259ENST00000639406 EIF3JO75822 258 aaKnown RBP13.2□□□□□ -0.3
KCNMA1-259ENST00000639406 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
KCNMA1-259ENST00000639406 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
KCNMA1-259ENST00000639406 ZSCAN30Q86W11 494 aa13.2□□□□□ -0.3
KCNMA1-259ENST00000639406 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
KCNMA1-259ENST00000639406 GTF2A1P52655 376 aaPredicted RBP13.19□□□□□ -0.3
KCNMA1-259ENST00000639406 MSH5O43196 834 aa13.19□□□□□ -0.3
KCNMA1-259ENST00000639406 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
KCNMA1-259ENST00000639406 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
KCNMA1-259ENST00000639406 U2AF1L5P0DN76 240 aaPredicted RBP13.19□□□□□ -0.3
KCNMA1-259ENST00000639406 U2AF1Q01081 240 aaKnown RBP eCLIP13.19□□□□□ -0.3
KCNMA1-259ENST00000639406 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
KCNMA1-259ENST00000639406 REC8O95072 547 aa13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 PDILTQ8N807 584 aa13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 NAT10Q9H0A0 1025 aaKnown RBP13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 MBD3O95983 291 aa13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 NAP1L1P55209 391 aaKnown RBP13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 NLRP13Q86W25 1043 aa13.18□□□□□ -0.3
KCNMA1-259ENST00000639406 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
KCNMA1-259ENST00000639406 ERLIN1O75477 346 aa13.17□□□□□ -0.3
KCNMA1-259ENST00000639406 TICAM2Q86XR7 235 aa13.17□□□□□ -0.3
KCNMA1-259ENST00000639406 HOOK1Q9UJC3 728 aaKnown RBP13.17□□□□□ -0.3
KCNMA1-259ENST00000639406 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-259ENST00000639406 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
KCNMA1-259ENST00000639406 NEXNQ0ZGT2 675 aa13.16□□□□□ -0.3
KCNMA1-259ENST00000639406 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
KCNMA1-259ENST00000639406 VPS37CA5D8V6 355 aaPredicted RBP13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 POGKQ9P215 609 aa13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
KCNMA1-259ENST00000639406 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
KCNMA1-259ENST00000639406 MPNDQ8N594 471 aa13.14□□□□□ -0.31
KCNMA1-259ENST00000639406 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
KCNMA1-259ENST00000639406 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-259ENST00000639406 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-259ENST00000639406 EID1Q9Y6B2 187 aa13.13□□□□□ -0.31
KCNMA1-259ENST00000639406 SMC2O95347 1197 aa13.13□□□□□ -0.31
KCNMA1-259ENST00000639406 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
KCNMA1-259ENST00000639406 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
KCNMA1-259ENST00000639406 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 DDX11Q96FC9 970 aa13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 GOLGA6L10A6NI86 522 aa13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 CCDC102AQ96A19 550 aa13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
KCNMA1-259ENST00000639406 KIF15Q9NS87 1388 aa13.11□□□□□ -0.31
KCNMA1-259ENST00000639406 OLFM4Q6UX06 510 aa13.11□□□□□ -0.31
KCNMA1-259ENST00000639406 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
KCNMA1-259ENST00000639406 GTF2F1P35269 517 aaKnown RBP eCLIP13.11□□□□□ -0.31
KCNMA1-259ENST00000639406 TMCO3Q6UWJ1 677 aa13.1□□□□□ -0.31
KCNMA1-259ENST00000639406 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
KCNMA1-259ENST00000639406 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-259ENST00000639406 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
KCNMA1-259ENST00000639406 FAM193AP78312 1265 aa13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 KANK1Q14678 1352 aa13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 ROCK2O75116 1388 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 CT47A1Q5JQC4 288 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 BACH2Q9BYV9 841 aa13.09□□□□□ -0.31
KCNMA1-259ENST00000639406 MARCH6O60337 910 aa13.08□□□□□ -0.31
KCNMA1-259ENST00000639406 NOL10Q9BSC4 688 aaKnown RBP13.08□□□□□ -0.31
KCNMA1-259ENST00000639406 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.32
KCNMA1-259ENST00000639406 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms