RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 GOLGA6BA6NDN3 693 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 SH3BP5O60239 455 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 GOLGA6DP0CG33 693 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 GOLGA6AQ9NYA3 693 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 KIAA2012Q0VF49 1180 aa5.35□□□□□ -1.55
SCN3A-209ENST00000639244 NUCKS1Q9H1E3 243 aaKnown RBP5.35□□□□□ -1.55
SCN3A-209ENST00000639244 MAGEC2Q9UBF1 373 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-209ENST00000639244 MTA3Q9BTC8 594 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 ZNF280DQ6N043 979 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-209ENST00000639244 KRBA2Q6ZNG9 492 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 SGSM3Q96HU1 749 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 CCDC94Q9BW85 323 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-209ENST00000639244 ANKRD62A6NC57 917 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 PEX14O75381 377 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 ZNF853P0CG23 659 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 CSPP1Q1MSJ5 1256 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 MORC4Q8TE76 937 aa5.34□□□□□ -1.55
SCN3A-209ENST00000639244 TRIM6-TRIM34B2RNG4 842 aa5.34□□□□□ -1.56
SCN3A-209ENST00000639244 GOLGA6L22H0YM25 854 aa5.34□□□□□ -1.56
SCN3A-209ENST00000639244 PIAS4Q8N2W9 510 aaPredicted RBP5.34□□□□□ -1.56
SCN3A-209ENST00000639244 MPNDQ8N594 471 aa5.34□□□□□ -1.56
SCN3A-209ENST00000639244 TRIM34Q9BYJ4 488 aa5.34□□□□□ -1.56
SCN3A-209ENST00000639244 NPM3O75607 178 aaKnown RBP5.33□□□□□ -1.56
SCN3A-209ENST00000639244 ESPNB1AK53 854 aa5.33□□□□□ -1.56
SCN3A-209ENST00000639244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCN3A-209ENST00000639244 ZFYVE27Q5T4F4 411 aa5.33□□□□□ -1.56
SCN3A-209ENST00000639244 P3H3Q8IVL6 736 aa5.33□□□□□ -1.56
SCN3A-209ENST00000639244 GOLGA6L1Q8N7Z2 621 aa5.33□□□□□ -1.56
SCN3A-209ENST00000639244 PIK3R5Q8WYR1 880 aa5.33□□□□□ -1.56
SCN3A-209ENST00000639244 PRDM2Q13029 1718 aa5.33□□□□□ -1.56
SCN3A-209ENST00000639244 UBA5Q9GZZ9 404 aa5.33□□□□□ -1.56
SCN3A-209ENST00000639244 TERF1P54274 439 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 EFCC1Q9HA90 598 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 FAM13BQ9NYF5 915 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 GET4Q7L5D6 327 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-209ENST00000639244 CFAP53Q96M91 514 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 HDGFL1Q5TGJ6 251 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 TIGD1Q96MW7 591 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 SPINK5Q9NQ38 1064 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-209ENST00000639244 CCP110O43303 1012 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 ITFG2Q969R8 447 aa5.32□□□□□ -1.56
SCN3A-209ENST00000639244 UPF2Q9HAU5 1272 aaKnown RBP5.31□□□□□ -1.56
SCN3A-209ENST00000639244 CTAGE5O15320 804 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 CALR3Q96L12 384 aaKnown RBP5.31□□□□□ -1.56
SCN3A-209ENST00000639244 FOSBP53539 338 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 LRCH2Q5VUJ6 765 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 CCDC82Q8N4S0 544 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 KIF4AO95239 1232 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 SARNPP82979 210 aaKnown RBP5.31□□□□□ -1.56
SCN3A-209ENST00000639244 CASQ1P31415 396 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 TPM3P06753 285 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 NCAPGQ9BPX3 1015 aa5.31□□□□□ -1.56
SCN3A-209ENST00000639244 FOXD4Q12950 439 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-209ENST00000639244 CCDC85AQ96PX6 553 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-209ENST00000639244 IPO8O15397 1037 aaKnown RBP5.3□□□□□ -1.56
SCN3A-209ENST00000639244 HTATSF1O43719 755 aaKnown RBP5.3□□□□□ -1.56
SCN3A-209ENST00000639244 ZNF771Q7L3S4 317 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-209ENST00000639244 NGEFQ8N5V2 710 aa5.3□□□□□ -1.56
SCN3A-209ENST00000639244 TMCO5BA8MYB1 307 aa5.3□□□□□ -1.56
SCN3A-209ENST00000639244 SDR16C5Q8N3Y7 309 aa5.3□□□□□ -1.56
SCN3A-209ENST00000639244 H0YHG0 523 aa5.3□□□□□ -1.56
SCN3A-209ENST00000639244 ANKRD23Q86SG2 305 aa5.3□□□□□ -1.56
SCN3A-209ENST00000639244 RNF217Q8TC41 542 aa5.3□□□□□ -1.56
SCN3A-209ENST00000639244 CALCOCO1Q9P1Z2 691 aa5.3□□□□□ -1.56
SCN3A-209ENST00000639244 ERCC4Q92889 916 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-209ENST00000639244 KCNJ4P48050 445 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 GTF2A1P52655 376 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-209ENST00000639244 PROCA1Q8NCQ7 364 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-209ENST00000639244 ARHGEF1Q92888 912 aaKnown RBP5.29□□□□□ -1.56
SCN3A-209ENST00000639244 TRAIPQ9BWF2 469 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 PNMA2Q9UL42 364 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 HSP90B2PQ58FF3 399 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 SPATA32Q96LK8 384 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 ABCF2Q9UG63 623 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 ISY1Q9ULR0 285 aaKnown RBP5.29□□□□□ -1.56
SCN3A-209ENST00000639244 CEP126Q9P2H0 1117 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 KIAA1211Q6ZU35 1233 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 KIF3CO14782 793 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 RAD54L2Q9Y4B4 1467 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 ZKSCAN2Q63HK3 967 aa5.29□□□□□ -1.56
SCN3A-209ENST00000639244 DDX46Q7L014 1031 aaKnown RBP5.28□□□□□ -1.56
SCN3A-209ENST00000639244 ATL2Q8NHH9 583 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 HSPA5P11021 654 aaKnown RBP5.28□□□□□ -1.56
SCN3A-209ENST00000639244 HSCBQ8IWL3 235 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 MKL1Q969V6 931 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 DYNC1I1O14576 645 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 IRF6O14896 467 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 TRDNQ13061 729 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 NME8Q8N427 588 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 ACRBPQ8NEB7 543 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 BRMS1Q9HCU9 246 aa5.28□□□□□ -1.56
SCN3A-209ENST00000639244 FRAT1Q92837 279 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-209ENST00000639244 METTL14Q9HCE5 456 aaKnown RBP5.27□□□□□ -1.57
SCN3A-209ENST00000639244 WWC3Q9ULE0 1092 aa5.27□□□□□ -1.57
SCN3A-209ENST00000639244 CIZ1Q9ULV3 898 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-209ENST00000639244 PAK3O75914 559 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-209ENST00000639244 KCNA1Q09470 495 aa5.27□□□□□ -1.57
SCN3A-209ENST00000639244 SLC26A8Q96RN1 970 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms