RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 WWC2Q6AWC2 1192 aa23.38■■□□□ 1.33
CACNA1A-257ENST00000638009 ZFYVE27Q5T4F4 411 aa23.38■■□□□ 1.33
CACNA1A-257ENST00000638009 ROCK2O75116 1388 aaKnown RBP23.37■■□□□ 1.33
CACNA1A-257ENST00000638009 ERICH2A1L162 156 aa23.36■■□□□ 1.33
CACNA1A-257ENST00000638009 GON4LQ3T8J9 2241 aa23.36■■□□□ 1.33
CACNA1A-257ENST00000638009 NUCB2P80303 420 aa23.36■■□□□ 1.33
CACNA1A-257ENST00000638009 ENOX2Q16206 610 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-257ENST00000638009 AXDND1Q5T1B0 1012 aaPredicted RBP23.35■■□□□ 1.33
CACNA1A-257ENST00000638009 CENPJQ9HC77 1338 aaPredicted RBP23.35■■□□□ 1.33
CACNA1A-257ENST00000638009 BICD2Q8TD16 824 aa23.35■■□□□ 1.33
CACNA1A-257ENST00000638009 CCDC73Q6ZRK6 1079 aa23.34■■□□□ 1.33
CACNA1A-257ENST00000638009 SPATA24Q86W54 205 aa23.34■■□□□ 1.33
CACNA1A-257ENST00000638009 PIP4K2AP48426 406 aaPredicted RBP23.34■■□□□ 1.33
CACNA1A-257ENST00000638009 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
CACNA1A-257ENST00000638009 XBP1P17861 261 aa23.34■■□□□ 1.33
CACNA1A-257ENST00000638009 GTF2E1P29083 439 aaPredicted RBP23.34■■□□□ 1.33
CACNA1A-257ENST00000638009 FAM161AQ3B820 660 aa23.33■■□□□ 1.33
CACNA1A-257ENST00000638009 PPM1EQ8WY54 764 aa23.33■■□□□ 1.33
CACNA1A-257ENST00000638009 SYCP1Q15431 976 aa23.33■■□□□ 1.32
CACNA1A-257ENST00000638009 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
CACNA1A-257ENST00000638009 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.32
CACNA1A-257ENST00000638009 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
CACNA1A-257ENST00000638009 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
CACNA1A-257ENST00000638009 CEP162Q5TB80 1403 aa23.31■■□□□ 1.32
CACNA1A-257ENST00000638009 KIF3BO15066 747 aa23.3■■□□□ 1.32
CACNA1A-257ENST00000638009 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
CACNA1A-257ENST00000638009 NOL8Q76FK4 1167 aaKnown RBP23.29■■□□□ 1.32
CACNA1A-257ENST00000638009 DESP17661 470 aa23.29■■□□□ 1.32
CACNA1A-257ENST00000638009 KCNH8Q96L42 1107 aa23.29■■□□□ 1.32
CACNA1A-257ENST00000638009 PAF1Q8N7H5 531 aa23.28■■□□□ 1.32
CACNA1A-257ENST00000638009 TERF2IPQ9NYB0 399 aa23.28■■□□□ 1.32
CACNA1A-257ENST00000638009 ERLIN1O75477 346 aa23.27■■□□□ 1.32
CACNA1A-257ENST00000638009 NF2P35240 595 aa23.27■■□□□ 1.32
CACNA1A-257ENST00000638009 GIMAP7Q8NHV1 300 aa23.27■■□□□ 1.32
CACNA1A-257ENST00000638009 DCAF11Q8TEB1 546 aa23.27■■□□□ 1.32
CACNA1A-257ENST00000638009 CCDC91Q7Z6B0 441 aa23.26■■□□□ 1.31
CACNA1A-257ENST00000638009 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
CACNA1A-257ENST00000638009 FILIP1LQ4L180 1135 aa23.26■■□□□ 1.31
CACNA1A-257ENST00000638009 NASPP49321 788 aaPredicted RBP23.25■■□□□ 1.31
CACNA1A-257ENST00000638009 CFAP57Q96MR6 1250 aa23.25■■□□□ 1.31
CACNA1A-257ENST00000638009 ZNHIT6Q9NWK9 470 aaKnown RBP23.25■■□□□ 1.31
CACNA1A-257ENST00000638009 STAMBPO95630 424 aa23.25■■□□□ 1.31
CACNA1A-257ENST00000638009 DDX11Q96FC9 970 aa23.24■■□□□ 1.31
CACNA1A-257ENST00000638009 TXLNAP40222 546 aa23.23■■□□□ 1.31
CACNA1A-257ENST00000638009 SENP3-EIF4A1A0A087X0R7 540 aa23.23■■□□□ 1.31
CACNA1A-257ENST00000638009 RILPL2Q969X0 211 aa23.23■■□□□ 1.31
CACNA1A-257ENST00000638009 SLC4A10Q6U841 1118 aa23.22■■□□□ 1.31
CACNA1A-257ENST00000638009 PKNOX2Q96KN3 472 aa23.22■■□□□ 1.31
CACNA1A-257ENST00000638009 MAGEC2Q9UBF1 373 aaPredicted RBP23.22■■□□□ 1.31
CACNA1A-257ENST00000638009 CCNB3Q8WWL7 1395 aa23.21■■□□□ 1.31
CACNA1A-257ENST00000638009 FAM107BQ9H098 131 aa23.21■■□□□ 1.31
CACNA1A-257ENST00000638009 CWC22Q9HCG8 908 aaKnown RBP23.21■■□□□ 1.31
CACNA1A-257ENST00000638009 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.2■■□□□ 1.31
CACNA1A-257ENST00000638009 TRIM21P19474 475 aaKnown RBP23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 SOX12O15370 315 aa23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 FOXD4L5Q5VV16 416 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 FOXD4L4Q8WXT5 416 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 PDCP20941 246 aa23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 VPS37DQ86XT2 251 aa23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-257ENST00000638009 GOLGA6L10A0A0M3HER8 536 aa23.19■■□□□ 1.3
CACNA1A-257ENST00000638009 FOXD4L1Q9NU39 408 aa23.19■■□□□ 1.3
CACNA1A-257ENST00000638009 KIF27Q86VH2 1401 aa23.19■■□□□ 1.3
CACNA1A-257ENST00000638009 ANKRD62A6NC57 917 aa23.17■■□□□ 1.3
CACNA1A-257ENST00000638009 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.17■■□□□ 1.3
CACNA1A-257ENST00000638009 KINO60870 393 aaKnown RBP23.17■■□□□ 1.3
CACNA1A-257ENST00000638009 MRE11P49959 708 aa23.16■■□□□ 1.3
CACNA1A-257ENST00000638009 SMC3Q9UQE7 1217 aa23.16■■□□□ 1.3
CACNA1A-257ENST00000638009 AAMPQ13685 434 aa23.16■■□□□ 1.3
CACNA1A-257ENST00000638009 NFXL1Q6ZNB6 911 aa23.16■■□□□ 1.3
CACNA1A-257ENST00000638009 NINLQ9Y2I6 1382 aa23.15■■□□□ 1.3
CACNA1A-257ENST00000638009 MBD3O95983 291 aa23.15■■□□□ 1.3
CACNA1A-257ENST00000638009 DHX16O60231 1041 aaKnown RBP23.15■■□□□ 1.3
CACNA1A-257ENST00000638009 STIM1Q13586 685 aa23.14■■□□□ 1.3
CACNA1A-257ENST00000638009 PDILTQ8N807 584 aa23.14■■□□□ 1.29
CACNA1A-257ENST00000638009 LRRCC1Q9C099 1032 aa23.14■■□□□ 1.29
CACNA1A-257ENST00000638009 CCAR1Q8IX12 1150 aaKnown RBP23.13■■□□□ 1.29
CACNA1A-257ENST00000638009 MCM3P25205 808 aa23.13■■□□□ 1.29
CACNA1A-257ENST00000638009 DNAI2Q9GZS0 605 aa23.12■■□□□ 1.29
CACNA1A-257ENST00000638009 PODXL2Q9NZ53 605 aa23.12■■□□□ 1.29
CACNA1A-257ENST00000638009 CEP63Q96MT8 703 aa23.12■■□□□ 1.29
CACNA1A-257ENST00000638009 CCDC112Q8NEF3 446 aa23.12■■□□□ 1.29
CACNA1A-257ENST00000638009 SDF4Q9BRK5 362 aa23.12■■□□□ 1.29
CACNA1A-257ENST00000638009 RALYLQ86SE5 291 aaKnown RBP23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 PDCL2Q8N4E4 241 aa23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 NGEFQ8N5V2 710 aa23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 WASHC2AQ641Q2 1341 aa23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 CCDC181Q5TID7 509 aa23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 INTS3Q68E01 1043 aaKnown RBP23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 ANO2Q9NQ90 1003 aa23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 ANKRD45Q5TZF3 282 aa23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 HSP90AB4PQ58FF6 505 aa23.11■■□□□ 1.29
CACNA1A-257ENST00000638009 CCDC146Q8IYE0 955 aa23.1■■□□□ 1.29
CACNA1A-257ENST00000638009 PSMA5P28066 241 aa23.1■■□□□ 1.29
CACNA1A-257ENST00000638009 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
CACNA1A-257ENST00000638009 MYO10Q9HD67 2058 aa23.1■■□□□ 1.29
CACNA1A-257ENST00000638009 ERC2O15083 957 aa23.1■■□□□ 1.29
CACNA1A-257ENST00000638009 SART3Q15020 963 aaKnown RBP23.09■■□□□ 1.29
CACNA1A-257ENST00000638009 DACH1Q9UI36 760 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms