RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ZPR1O75312 459 aa6.19□□□□□ -1.42
PSPC1-208ENST00000635562 KMT5BQ4FZB7 885 aa6.19□□□□□ -1.42
PSPC1-208ENST00000635562 ZNF516Q92618 1163 aa6.19□□□□□ -1.42
PSPC1-208ENST00000635562 PCDHB3Q9Y5E6 796 aa6.19□□□□□ -1.42
PSPC1-208ENST00000635562 MLLT3P42568 568 aaPredicted RBP6.18□□□□□ -1.42
PSPC1-208ENST00000635562 COPS2P61201 443 aa6.18□□□□□ -1.42
PSPC1-208ENST00000635562 TRAF7Q6Q0C0 670 aa6.18□□□□□ -1.42
PSPC1-208ENST00000635562 TMEM134Q9H6X4 195 aa6.18□□□□□ -1.42
PSPC1-208ENST00000635562 FCHSD2O94868 740 aa6.17□□□□□ -1.42
PSPC1-208ENST00000635562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.16□□□□□ -1.42
PSPC1-208ENST00000635562 RSPH4AQ5TD94 716 aa6.16□□□□□ -1.42
PSPC1-208ENST00000635562 ADGRG1Q9Y653 693 aa6.16□□□□□ -1.42
PSPC1-208ENST00000635562 NUTM2FA1L443 756 aa6.15□□□□□ -1.42
PSPC1-208ENST00000635562 ACTN4O43707 911 aaKnown RBP6.15□□□□□ -1.42
PSPC1-208ENST00000635562 OATP04181 439 aa6.15□□□□□ -1.42
PSPC1-208ENST00000635562 NKX2-3Q8TAU0 364 aa6.15□□□□□ -1.42
PSPC1-208ENST00000635562 SMYD5Q6GMV2 418 aa6.14□□□□□ -1.43
PSPC1-208ENST00000635562 PDZRN3Q9UPQ7 1066 aa6.14□□□□□ -1.43
PSPC1-208ENST00000635562 RCCD1A6NED2 376 aa6.13□□□□□ -1.43
PSPC1-208ENST00000635562 NR1I2O75469 434 aa6.13□□□□□ -1.43
PSPC1-208ENST00000635562 BLOC1S3Q6QNY0 202 aa6.13□□□□□ -1.43
PSPC1-208ENST00000635562 ANKLE1Q8NAG6 615 aa6.13□□□□□ -1.43
PSPC1-208ENST00000635562 CFHP08603 1231 aa6.12□□□□□ -1.43
PSPC1-208ENST00000635562 HIC1Q14526 733 aa6.12□□□□□ -1.43
PSPC1-208ENST00000635562 RNF223E7ERA6 249 aa6.11□□□□□ -1.43
PSPC1-208ENST00000635562 SLC19A1P41440 591 aa6.11□□□□□ -1.43
PSPC1-208ENST00000635562 PRR20EP86478 221 aa6.1□□□□□ -1.43
PSPC1-208ENST00000635562 PRR20CP86479 221 aa6.1□□□□□ -1.43
PSPC1-208ENST00000635562 PRR20DP86480 221 aa6.1□□□□□ -1.43
PSPC1-208ENST00000635562 PRR20BP86481 221 aa6.1□□□□□ -1.43
PSPC1-208ENST00000635562 PRR20AP86496 221 aa6.1□□□□□ -1.43
PSPC1-208ENST00000635562 PXYLP1Q8TE99 480 aa6.1□□□□□ -1.43
PSPC1-208ENST00000635562 ADH1BP00325 375 aa6.09□□□□□ -1.43
PSPC1-208ENST00000635562 ZNF598Q86UK7 904 aaKnown RBP6.09□□□□□ -1.43
PSPC1-208ENST00000635562 LCE2BO14633 110 aa6.08□□□□□ -1.44
PSPC1-208ENST00000635562 SEMA3EO15041 775 aa6.08□□□□□ -1.44
PSPC1-208ENST00000635562 SPRYD7Q5W111 196 aa6.08□□□□□ -1.44
PSPC1-208ENST00000635562 DGAT1O75907 488 aa6.07□□□□□ -1.44
PSPC1-208ENST00000635562 S1PR4O95977 384 aa6.07□□□□□ -1.44
PSPC1-208ENST00000635562 LMOD2Q6P5Q4 547 aa6.07□□□□□ -1.44
PSPC1-208ENST00000635562 METTL3Q86U44 580 aaKnown RBP6.07□□□□□ -1.44
PSPC1-208ENST00000635562 SLC6A16Q9GZN6 736 aa6.07□□□□□ -1.44
PSPC1-208ENST00000635562 TESPA1A2RU30 521 aaPredicted RBP6.06□□□□□ -1.44
PSPC1-208ENST00000635562 TLL1O43897 1013 aa6.06□□□□□ -1.44
PSPC1-208ENST00000635562 SLC10A3P09131 477 aa6.06□□□□□ -1.44
PSPC1-208ENST00000635562 PKDCCQ504Y2 493 aa6.06□□□□□ -1.44
PSPC1-208ENST00000635562 SULF1Q8IWU6 871 aa6.06□□□□□ -1.44
PSPC1-208ENST00000635562 GNPATO15228 680 aa6.05□□□□□ -1.44
PSPC1-208ENST00000635562 PRKCSHP14314 528 aaPredicted RBP6.05□□□□□ -1.44
PSPC1-208ENST00000635562 ZNF787Q6DD87 383 aa6.05□□□□□ -1.44
PSPC1-208ENST00000635562 FAM161AQ3B820 660 aa6.04□□□□□ -1.44
PSPC1-208ENST00000635562 ZNF697Q5TEC3 545 aa6.04□□□□□ -1.44
PSPC1-208ENST00000635562 TRIM67Q6ZTA4 783 aa6.04□□□□□ -1.44
PSPC1-208ENST00000635562 SCUBE3Q8IX30 993 aa6.04□□□□□ -1.44
PSPC1-208ENST00000635562 SPSB2Q99619 263 aa6.04□□□□□ -1.44
PSPC1-208ENST00000635562 DAXXQ9UER7 740 aaPredicted RBP6.04□□□□□ -1.44
PSPC1-208ENST00000635562 RPIAP49247 311 aa6.02□□□□□ -1.45
PSPC1-208ENST00000635562 GRIPAP1Q4V328 841 aa6.02□□□□□ -1.45
PSPC1-208ENST00000635562 RDH13Q8NBN7 331 aa6.02□□□□□ -1.45
PSPC1-208ENST00000635562 EMID1Q96A84 441 aaPredicted RBP6.02□□□□□ -1.45
PSPC1-208ENST00000635562 ATP6V1AP38606 617 aa6.01□□□□□ -1.45
PSPC1-208ENST00000635562 TPRNQ4KMQ1 711 aa6.01□□□□□ -1.45
PSPC1-208ENST00000635562 RBM26Q5T8P6 1007 aaKnown RBP6.01□□□□□ -1.45
PSPC1-208ENST00000635562 LIAT1Q6ZQX7 453 aa6.01□□□□□ -1.45
PSPC1-208ENST00000635562 SALL2Q9Y467 1007 aaPredicted RBP6.01□□□□□ -1.45
PSPC1-208ENST00000635562 GDF9O60383 454 aa6□□□□□ -1.45
PSPC1-208ENST00000635562 FMNL1O95466 1100 aaPredicted RBP6□□□□□ -1.45
PSPC1-208ENST00000635562 MYT1Q01538 1121 aa6□□□□□ -1.45
PSPC1-208ENST00000635562 FAM187AA6NFU0 413 aa5.99□□□□□ -1.45
PSPC1-208ENST00000635562 TULP1O00294 542 aaPredicted RBP5.99□□□□□ -1.45
PSPC1-208ENST00000635562 PPEF1O14829 653 aaPredicted RBP5.99□□□□□ -1.45
PSPC1-208ENST00000635562 CD2BP2O95400 341 aaKnown RBP5.99□□□□□ -1.45
PSPC1-208ENST00000635562 PUS10Q3MIT2 529 aaKnown RBP5.99□□□□□ -1.45
PSPC1-208ENST00000635562 MORN1Q5T089 497 aa5.99□□□□□ -1.45
PSPC1-208ENST00000635562 DDX11L8A8MPP1 907 aa5.98□□□□□ -1.45
PSPC1-208ENST00000635562 GPR37O15354 613 aa5.98□□□□□ -1.45
PSPC1-208ENST00000635562 GCGRP47871 477 aa5.98□□□□□ -1.45
PSPC1-208ENST00000635562 GPIHBP1Q8IV16 184 aa5.98□□□□□ -1.45
PSPC1-208ENST00000635562 TNFRSF10AO00220 468 aa5.97□□□□□ -1.45
PSPC1-208ENST00000635562 FUT2Q10981 343 aa5.97□□□□□ -1.45
PSPC1-208ENST00000635562 Q3C1V9 767 aa5.97□□□□□ -1.45
PSPC1-208ENST00000635562 MSS51Q4VC12 460 aa5.97□□□□□ -1.45
PSPC1-208ENST00000635562 THAP11Q96EK4 314 aa5.97□□□□□ -1.45
PSPC1-208ENST00000635562 ZBTB24O43167 697 aaPredicted RBP5.96□□□□□ -1.46
PSPC1-208ENST00000635562 PLA2G2CQ5R387 149 aa5.96□□□□□ -1.46
PSPC1-208ENST00000635562 CRIPAKQ8N1N5 446 aa5.96□□□□□ -1.46
PSPC1-208ENST00000635562 FECHP22830 423 aa5.95□□□□□ -1.46
PSPC1-208ENST00000635562 CTC1Q2NKJ3 1217 aa5.95□□□□□ -1.46
PSPC1-208ENST00000635562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.95□□□□□ -1.46
PSPC1-208ENST00000635562 SLC27A5Q9Y2P5 690 aa5.95□□□□□ -1.46
PSPC1-208ENST00000635562 FCF1Q9Y324 198 aaKnown RBP5.95□□□□□ -1.46
PSPC1-208ENST00000635562 BRICD5Q6PL45 260 aa5.94□□□□□ -1.46
PSPC1-208ENST00000635562 ZNF775Q96BV0 537 aaPredicted RBP5.94□□□□□ -1.46
PSPC1-208ENST00000635562 PKD2L1Q9P0L9 805 aa5.94□□□□□ -1.46
PSPC1-208ENST00000635562 AVPP01185 164 aa5.93□□□□□ -1.46
PSPC1-208ENST00000635562 FOXC1Q12948 553 aa5.93□□□□□ -1.46
PSPC1-208ENST00000635562 MAP2K5Q13163 448 aa5.93□□□□□ -1.46
PSPC1-208ENST00000635562 CYP4X1Q8N118 509 aa5.93□□□□□ -1.46
PSPC1-208ENST00000635562 USP46P62068 366 aa5.92□□□□□ -1.46
PSPC1-208ENST00000635562 FAM160A2Q8N612 972 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms