RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	SPHKAP	Q2M3C7	1700 aa		18.77	■□□□□ 0.59
SOX2-OT-256	ENST00000630482	ZFYVE9	O95405	1425 aa		18.74	■□□□□ 0.59
SOX2-OT-256	ENST00000630482	SLC26A8	Q96RN1	970 aa		18.72	■□□□□ 0.59
SOX2-OT-256	ENST00000630482	NKTR	P30414	1462 aa	Known RBP	18.71	■□□□□ 0.59
SOX2-OT-256	ENST00000630482	TMEM94	Q12767	1356 aa		18.7	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	PPARGC1B	Q86YN6	1023 aa	Known RBP	18.7	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	PHLPP1	O60346	1717 aa		18.69	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	RIMS2	Q9UQ26	1411 aa		18.69	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	RBM33	Q96EV2	1170 aa	Known RBP	18.69	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	ROCK1	Q13464	1354 aa		18.68	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	SLC52A1	Q9NWF4	448 aa		18.68	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	NRXN3	Q9Y4C0	1643 aa		18.66	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.66	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	KIF1B	O60333	1816 aa		18.65	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	KCNA6	P17658	529 aa		18.65	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	ITGAE	P38570	1179 aa		18.65	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	PLEKHG1	Q9ULL1	1385 aa		18.65	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	DIP2A	Q14689	1571 aa		18.64	■□□□□ 0.58
SOX2-OT-256	ENST00000630482	BCAN	Q96GW7	911 aa		18.63	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	PROSER2	Q86WR7	435 aa	Predicted RBP	18.62	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	PHF23	Q9BUL5	403 aa	Predicted RBP	18.62	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	CLTCL1	P53675	1640 aa		18.62	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	FAM135B	Q49AJ0	1406 aa		18.61	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	CHGA	P10645	457 aa	Known RBP	18.61	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.61	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	ADAMTS13	Q76LX8	1427 aa		18.6	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	XRN1	Q8IZH2	1706 aa	Known RBP	18.6	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	NUP155	O75694	1391 aa		18.59	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	PPP1R15A	O75807	674 aa	Predicted RBP	18.59	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	COL16A1	Q07092	1604 aa	Predicted RBP	18.59	■□□□□ 0.57
SOX2-OT-256	ENST00000630482	TRPM2	O94759	1503 aa		18.58	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	SETD1A	O15047	1707 aa	Known RBP	18.57	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	MSH6	P52701	1360 aa		18.56	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	SETBP1	Q9Y6X0	1596 aa		18.54	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	NALCN	Q8IZF0	1738 aa		18.54	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	PTPRU	Q92729	1446 aa		18.53	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	RRBP1	Q9P2E9	1410 aa	Known RBP	18.53	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	NEXMIF	Q5QGS0	1516 aa		18.53	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	RGS17	Q9UGC6	210 aa	Predicted RBP	18.52	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	SHPRH	Q149N8	1683 aa		18.52	■□□□□ 0.56
SOX2-OT-256	ENST00000630482	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	PPL	O60437	1756 aa		18.5	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	HDGF	P51858	240 aa	Known RBP	18.5	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	TBX22	Q9Y458	520 aa		18.5	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.49	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	NHSL1	Q5SYE7	1610 aa		18.49	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	NAIP	Q13075	1403 aa		18.49	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	PIK3R4	Q99570	1358 aa		18.47	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	SLAIN2	Q9P270	581 aa		18.46	■□□□□ 0.55
SOX2-OT-256	ENST00000630482	C14orf37	Q86TY3	774 aa		18.45	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	NCOA3	Q9Y6Q9	1424 aa		18.45	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	LRP6	O75581	1613 aa		18.44	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	AMOTL2	Q9Y2J4	779 aa		18.42	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	IFT172	Q9UG01	1749 aa		18.42	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	ZNF326	Q5BKZ1	582 aa	Known RBP	18.41	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	POTEA	Q6S8J7	498 aa		18.41	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	MET	P08581	1390 aa		18.41	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	JCAD	Q9P266	1359 aa		18.41	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	ASXL1	Q8IXJ9	1541 aa		18.4	■□□□□ 0.54
SOX2-OT-256	ENST00000630482	HFM1	A2PYH4	1435 aa		18.38	■□□□□ 0.53
SOX2-OT-256	ENST00000630482	C19orf44	Q9H6X5	657 aa		18.37	■□□□□ 0.53
SOX2-OT-256	ENST00000630482	DCC	P43146	1447 aa		18.37	■□□□□ 0.53
SOX2-OT-256	ENST00000630482	MST1R	Q04912	1400 aa		18.37	■□□□□ 0.53
SOX2-OT-256	ENST00000630482	ATF3	P18847	181 aa		18.36	■□□□□ 0.53
SOX2-OT-256	ENST00000630482	CADPS2	Q86UW7	1296 aa		18.36	■□□□□ 0.53
SOX2-OT-256	ENST00000630482	ADGRL3	Q9HAR2	1447 aa		18.34	■□□□□ 0.53
SOX2-OT-256	ENST00000630482	BRINP3	Q76B58	766 aa		18.33	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	LAMC1	P11047	1609 aa		18.32	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	TRIM52	Q96A61	297 aa		18.32	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	KNDC1	Q76NI1	1749 aa		18.29	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	SPATA31A6	Q5VVP1	1343 aa		18.28	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	PTCH1	Q13635	1447 aa		18.28	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	RGPD8	O14715	1765 aa	Predicted RBP	18.27	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.27	■□□□□ 0.52
SOX2-OT-256	ENST00000630482	MARF1	Q9Y4F3	1742 aa	Known RBP	18.26	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	FOXD1	Q16676	465 aa		18.26	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	DDX17	Q92841	729 aa	Known RBP	18.26	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	ROBO2	Q9HCK4	1378 aa		18.26	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	SETD5	Q9C0A6	1442 aa		18.25	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	MEX3C	Q5U5Q3	659 aa	Known RBP	18.25	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	PRAG1	Q86YV5	1406 aa		18.23	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	C1orf167	Q5SNV9	1468 aa		18.23	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.23	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	NUTM2E	B1AL46	878 aa	Predicted RBP	18.23	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.23	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	CDC42BPG	Q6DT37	1551 aa		18.22	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	FMN2	Q9NZ56	1722 aa		18.21	■□□□□ 0.51
SOX2-OT-256	ENST00000630482	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.2	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	PNPLA6	Q8IY17	1366 aa		18.2	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	VGF	O15240	615 aa	Predicted RBP	18.2	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	CCDC144A	A2RUR9	1427 aa		18.19	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	SPATA31E1	Q6ZUB1	1445 aa		18.19	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	RPGRIP1L	Q68CZ1	1315 aa		18.18	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	ADGRF5	Q8IZF2	1346 aa		18.17	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	ZNF772	Q68DY9	489 aa	Predicted RBP	18.16	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	AFF2	P51816	1311 aa		18.16	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	ORAI2	Q96SN7	254 aa		18.15	■□□□□ 0.5
SOX2-OT-256	ENST00000630482	RGL3	Q3MIN7	710 aa		18.13	■□□□□ 0.49
SOX2-OT-256	ENST00000630482	LRRC59	Q96AG4	307 aa	Known RBP	18.13	■□□□□ 0.49
SOX2-OT-256	ENST00000630482	PIK3C2G	O75747	1445 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms