RNA–Protein interactions for RNA: ENST00000627440.2

SNAP23-223, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 210 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-223	ENST00000627440	PLXNC1	O60486	1568 aa		11.44	□□□□□ -0.58
SNAP23-223	ENST00000627440	FAM161A	Q3B820	660 aa		11.43	□□□□□ -0.58
SNAP23-223	ENST00000627440	TXNDC2	Q86VQ3	553 aa		11.43	□□□□□ -0.58
SNAP23-223	ENST00000627440	CAMSAP2	Q08AD1	1489 aa		11.43	□□□□□ -0.58
SNAP23-223	ENST00000627440	LTK	P29376	864 aa		11.42	□□□□□ -0.58
SNAP23-223	ENST00000627440	BRWD3	Q6RI45	1802 aa		11.42	□□□□□ -0.58
SNAP23-223	ENST00000627440	SHANK3	Q9BYB0	1731 aa		11.41	□□□□□ -0.58
SNAP23-223	ENST00000627440	A2M	P01023	1474 aa		11.41	□□□□□ -0.58
SNAP23-223	ENST00000627440	NCOA2	Q15596	1464 aa		11.41	□□□□□ -0.58
SNAP23-223	ENST00000627440	BRINP3	Q76B58	766 aa		11.41	□□□□□ -0.58
SNAP23-223	ENST00000627440	MAST1	Q9Y2H9	1570 aa		11.41	□□□□□ -0.58
SNAP23-223	ENST00000627440	APLP1	P51693	650 aa		11.4	□□□□□ -0.58
SNAP23-223	ENST00000627440	CADPS2	Q86UW7	1296 aa		11.4	□□□□□ -0.58
SNAP23-223	ENST00000627440	SAMD9	Q5K651	1589 aa		11.4	□□□□□ -0.58
SNAP23-223	ENST00000627440	PTCH1	Q13635	1447 aa		11.39	□□□□□ -0.59
SNAP23-223	ENST00000627440	C14orf37	Q86TY3	774 aa		11.39	□□□□□ -0.59
SNAP23-223	ENST00000627440	EID1	Q9Y6B2	187 aa		11.39	□□□□□ -0.59
SNAP23-223	ENST00000627440	ATF3	P18847	181 aa		11.37	□□□□□ -0.59
SNAP23-223	ENST00000627440	EZH2	Q15910	746 aa	Known RBP	11.37	□□□□□ -0.59
SNAP23-223	ENST00000627440	KRT27	Q7Z3Y8	459 aa		11.37	□□□□□ -0.59
SNAP23-223	ENST00000627440	DNAJC5G	Q8N7S2	189 aa		11.37	□□□□□ -0.59
SNAP23-223	ENST00000627440	MROH1	Q8NDA8	1641 aa		11.37	□□□□□ -0.59
SNAP23-223	ENST00000627440	DISP2	A7MBM2	1401 aa		11.36	□□□□□ -0.59
SNAP23-223	ENST00000627440	RGPD1	P0DJD0	1748 aa		11.36	□□□□□ -0.59
SNAP23-223	ENST00000627440	SEPT12	Q8IYM1	358 aa		11.36	□□□□□ -0.59
SNAP23-223	ENST00000627440	SLIT1	O75093	1534 aa		11.35	□□□□□ -0.59
SNAP23-223	ENST00000627440	ASXL1	Q8IXJ9	1541 aa		11.35	□□□□□ -0.59
SNAP23-223	ENST00000627440	GLI3	P10071	1580 aa		11.35	□□□□□ -0.59
SNAP23-223	ENST00000627440	NRK	Q7Z2Y5	1582 aa		11.35	□□□□□ -0.59
SNAP23-223	ENST00000627440	SAMD9L	Q8IVG5	1584 aa		11.35	□□□□□ -0.59
SNAP23-223	ENST00000627440	SPAG9	O60271	1321 aa	Known RBP	11.35	□□□□□ -0.59
SNAP23-223	ENST00000627440	UBR1	Q8IWV7	1749 aa		11.33	□□□□□ -0.6
SNAP23-223	ENST00000627440	NBPF8	Q3BBV2	869 aa		11.33	□□□□□ -0.6
SNAP23-223	ENST00000627440	NBPF14	Q5TI25	921 aa		11.33	□□□□□ -0.6
SNAP23-223	ENST00000627440	SLC26A8	Q96RN1	970 aa		11.32	□□□□□ -0.6
SNAP23-223	ENST00000627440	NCOA3	Q9Y6Q9	1424 aa		11.32	□□□□□ -0.6
SNAP23-223	ENST00000627440	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.31	□□□□□ -0.6
SNAP23-223	ENST00000627440	ARHGAP35	Q9NRY4	1499 aa		11.31	□□□□□ -0.6
SNAP23-223	ENST00000627440	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
SNAP23-223	ENST00000627440	JMY	Q8N9B5	988 aa		11.3	□□□□□ -0.6
SNAP23-223	ENST00000627440	SYT17	Q9BSW7	474 aa		11.3	□□□□□ -0.6
SNAP23-223	ENST00000627440	DLC1	Q96QB1	1528 aa		11.3	□□□□□ -0.6
SNAP23-223	ENST00000627440	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.29	□□□□□ -0.6
SNAP23-223	ENST00000627440	WASHC2C	Q9Y4E1	1318 aa		11.29	□□□□□ -0.6
SNAP23-223	ENST00000627440	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.29	□□□□□ -0.6
SNAP23-223	ENST00000627440	PARD3	Q8TEW0	1356 aa		11.28	□□□□□ -0.6
SNAP23-223	ENST00000627440	ADGRB2	O60241	1585 aa		11.28	□□□□□ -0.6
SNAP23-223	ENST00000627440	MYOM1	P52179	1685 aa		11.28	□□□□□ -0.6
SNAP23-223	ENST00000627440	GPR162	Q16538	588 aa		11.28	□□□□□ -0.6
SNAP23-223	ENST00000627440	CAMKK2	Q96RR4	588 aa		11.28	□□□□□ -0.6
SNAP23-223	ENST00000627440	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.28	□□□□□ -0.6
SNAP23-223	ENST00000627440	C19orf44	Q9H6X5	657 aa		11.28	□□□□□ -0.6
SNAP23-223	ENST00000627440	ATP10D	Q9P241	1426 aa		11.27	□□□□□ -0.6
SNAP23-223	ENST00000627440	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.27	□□□□□ -0.61
SNAP23-223	ENST00000627440	KLRG1	Q96E93	195 aa		11.27	□□□□□ -0.61
SNAP23-223	ENST00000627440	CDC42BPB	Q9Y5S2	1711 aa		11.26	□□□□□ -0.61
SNAP23-223	ENST00000627440	MLLT1	Q03111	559 aa	Predicted RBP	11.25	□□□□□ -0.61
SNAP23-223	ENST00000627440	DDX17	Q92841	729 aa	Known RBP	11.25	□□□□□ -0.61
SNAP23-223	ENST00000627440	TNS1	Q9HBL0	1735 aa	Known RBP	11.25	□□□□□ -0.61
SNAP23-223	ENST00000627440		A0A0G2JS52	829 aa		11.24	□□□□□ -0.61
SNAP23-223	ENST00000627440	MYT1	Q01538	1121 aa		11.24	□□□□□ -0.61
SNAP23-223	ENST00000627440	UNC5CL	Q8IV45	518 aa		11.24	□□□□□ -0.61
SNAP23-223	ENST00000627440	INO80	Q9ULG1	1556 aa	Predicted RBP	11.24	□□□□□ -0.61
SNAP23-223	ENST00000627440	TET3	O43151	1660 aa		11.22	□□□□□ -0.61
SNAP23-223	ENST00000627440	PPP1R15A	O75807	674 aa	Predicted RBP	11.22	□□□□□ -0.61
SNAP23-223	ENST00000627440	NUP188	Q5SRE5	1749 aa		11.22	□□□□□ -0.61
SNAP23-223	ENST00000627440	PREX2	Q70Z35	1606 aa		11.22	□□□□□ -0.61
SNAP23-223	ENST00000627440	ERVK-7	P63135	1459 aa		11.21	□□□□□ -0.61
SNAP23-223	ENST00000627440	TMEM2	Q9UHN6	1383 aa		11.21	□□□□□ -0.61
SNAP23-223	ENST00000627440	RREB1	Q92766	1687 aa		11.2	□□□□□ -0.62
SNAP23-223	ENST00000627440	BCAN	Q96GW7	911 aa		11.2	□□□□□ -0.62
SNAP23-223	ENST00000627440	FMN1	Q68DA7	1419 aa		11.19	□□□□□ -0.62
SNAP23-223	ENST00000627440	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.19	□□□□□ -0.62
SNAP23-223	ENST00000627440	SYCP2	Q9BX26	1530 aa		11.19	□□□□□ -0.62
SNAP23-223	ENST00000627440	WDR90	Q96KV7	1748 aa		11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	KIF3B	O15066	747 aa		11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	ONECUT3	O60422	494 aa	Predicted RBP	11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	HSPA1A	P0DMV8	641 aa	Known RBP	11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	HSPA1B	P0DMV9	641 aa	Known RBP	11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	ZNF526	Q8TF50	670 aa	Predicted RBP	11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	KIAA1210	Q9ULL0	1709 aa		11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	MARF1	Q9Y4F3	1742 aa	Known RBP	11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	CLIP1	P30622	1438 aa		11.18	□□□□□ -0.62
SNAP23-223	ENST00000627440	USP19	O94966	1318 aa		11.17	□□□□□ -0.62
SNAP23-223	ENST00000627440	PTGER2	P43116	358 aa		11.17	□□□□□ -0.62
SNAP23-223	ENST00000627440	PELP1	Q8IZL8	1130 aa	Known RBP	11.17	□□□□□ -0.62
SNAP23-223	ENST00000627440	CCDC9	Q9Y3X0	531 aa	Known RBP	11.17	□□□□□ -0.62
SNAP23-223	ENST00000627440	DCC	P43146	1447 aa		11.17	□□□□□ -0.62
SNAP23-223	ENST00000627440	ZBTB7A	O95365	584 aa		11.16	□□□□□ -0.62
SNAP23-223	ENST00000627440	APBA3	O96018	575 aa		11.16	□□□□□ -0.62
SNAP23-223	ENST00000627440	MYOM2	P54296	1465 aa		11.16	□□□□□ -0.62
SNAP23-223	ENST00000627440	MST1R	Q04912	1400 aa		11.16	□□□□□ -0.62
SNAP23-223	ENST00000627440	CHD2	O14647	1828 aa	Known RBP	11.16	□□□□□ -0.62
SNAP23-223	ENST00000627440	SLIT2	O94813	1529 aa		11.15	□□□□□ -0.62
SNAP23-223	ENST00000627440	FAM182B	Q5T319	152 aa		11.15	□□□□□ -0.62
SNAP23-223	ENST00000627440	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.15	□□□□□ -0.62
SNAP23-223	ENST00000627440	TRO	Q12816	1431 aa	Predicted RBP	11.15	□□□□□ -0.62
SNAP23-223	ENST00000627440	STAG3	Q9UJ98	1225 aa		11.14	□□□□□ -0.63
SNAP23-223	ENST00000627440	VPS72	Q15906	364 aa		11.13	□□□□□ -0.63
SNAP23-223	ENST00000627440	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.13	□□□□□ -0.63

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