RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 PRR14Q9BWN1 585 aa8.98□□□□□ -0.97
PTP4A2-220ENST00000627328 SLF2Q8IX21 1173 aa8.97□□□□□ -0.97
PTP4A2-220ENST00000627328 DDX12PQ92771 950 aa8.97□□□□□ -0.97
PTP4A2-220ENST00000627328 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
PTP4A2-220ENST00000627328 TSR1Q2NL82 804 aaKnown RBP8.96□□□□□ -0.98
PTP4A2-220ENST00000627328 LMOD2Q6P5Q4 547 aa8.96□□□□□ -0.98
PTP4A2-220ENST00000627328 LIAT1Q6ZQX7 453 aa8.96□□□□□ -0.98
PTP4A2-220ENST00000627328 GMPR2Q9P2T1 348 aaKnown RBP8.96□□□□□ -0.98
PTP4A2-220ENST00000627328 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
PTP4A2-220ENST00000627328 NBR1Q14596 966 aa8.94□□□□□ -0.98
PTP4A2-220ENST00000627328 FAM198AQ9UFP1 575 aa8.94□□□□□ -0.98
PTP4A2-220ENST00000627328 AXIN1O15169 862 aa8.93□□□□□ -0.98
PTP4A2-220ENST00000627328 AVPP01185 164 aa8.93□□□□□ -0.98
PTP4A2-220ENST00000627328 SUZ12Q15022 739 aaKnown RBP8.93□□□□□ -0.98
PTP4A2-220ENST00000627328 CTC1Q2NKJ3 1217 aa8.93□□□□□ -0.98
PTP4A2-220ENST00000627328 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
PTP4A2-220ENST00000627328 PCDHB3Q9Y5E6 796 aa8.93□□□□□ -0.98
PTP4A2-220ENST00000627328 DPYSL4O14531 572 aa8.91□□□□□ -0.98
PTP4A2-220ENST00000627328 C3orf80F5H4A9 247 aa8.9□□□□□ -0.98
PTP4A2-220ENST00000627328 TERTO14746 1132 aaKnown RBP8.9□□□□□ -0.98
PTP4A2-220ENST00000627328 NUDT18Q6ZVK8 323 aa8.9□□□□□ -0.98
PTP4A2-220ENST00000627328 PPEF1O14829 653 aaPredicted RBP8.88□□□□□ -0.99
PTP4A2-220ENST00000627328 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
PTP4A2-220ENST00000627328 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
PTP4A2-220ENST00000627328 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
PTP4A2-220ENST00000627328 S1PR4O95977 384 aa8.87□□□□□ -0.99
PTP4A2-220ENST00000627328 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
PTP4A2-220ENST00000627328 BLOC1S3Q6QNY0 202 aa8.86□□□□□ -0.99
PTP4A2-220ENST00000627328 FOXC1Q12948 553 aa8.85□□□□□ -0.99
PTP4A2-220ENST00000627328 PKD2L1Q9P0L9 805 aa8.85□□□□□ -0.99
PTP4A2-220ENST00000627328 TLL1O43897 1013 aa8.84□□□□□ -0.99
PTP4A2-220ENST00000627328 LCE2CQ5TA81 110 aa8.84□□□□□ -0.99
PTP4A2-220ENST00000627328 PAXIP1Q6ZW49 1069 aaPredicted RBP8.84□□□□□ -0.99
PTP4A2-220ENST00000627328 CADPS2Q86UW7 1296 aa8.83□□□□□ -1
PTP4A2-220ENST00000627328 CFAP44Q96MT7 982 aa8.83□□□□□ -1
PTP4A2-220ENST00000627328 CYP4X1Q8N118 509 aa8.82□□□□□ -1
PTP4A2-220ENST00000627328 TOR4AQ9NXH8 423 aa8.82□□□□□ -1
PTP4A2-220ENST00000627328 ZSCAN1Q8NBB4 408 aa8.81□□□□□ -1
PTP4A2-220ENST00000627328 SENP2Q9HC62 589 aa8.81□□□□□ -1
PTP4A2-220ENST00000627328 ADH1BP00325 375 aa8.8□□□□□ -1
PTP4A2-220ENST00000627328 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
PTP4A2-220ENST00000627328 TRIM47Q96LD4 638 aa8.78□□□□□ -1
PTP4A2-220ENST00000627328 SNRPBP14678 240 aaKnown RBP8.77□□□□□ -1.01
PTP4A2-220ENST00000627328 PDIA6Q15084 440 aa8.77□□□□□ -1.01
PTP4A2-220ENST00000627328 PLA2G2CQ5R387 149 aa8.77□□□□□ -1.01
PTP4A2-220ENST00000627328 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
PTP4A2-220ENST00000627328 SPDYE16A6NNV3 312 aaPredicted RBP8.76□□□□□ -1.01
PTP4A2-220ENST00000627328 RPIAP49247 311 aa8.76□□□□□ -1.01
PTP4A2-220ENST00000627328 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
PTP4A2-220ENST00000627328 KMT5BQ4FZB7 885 aa8.75□□□□□ -1.01
PTP4A2-220ENST00000627328 KIFC2Q96AC6 838 aa8.75□□□□□ -1.01
PTP4A2-220ENST00000627328 CD2BP2O95400 341 aaKnown RBP8.74□□□□□ -1.01
PTP4A2-220ENST00000627328 ACTN4O43707 911 aaKnown RBP8.73□□□□□ -1.01
PTP4A2-220ENST00000627328 NR1I2O75469 434 aa8.73□□□□□ -1.01
PTP4A2-220ENST00000627328 TTC13Q8NBP0 860 aa8.73□□□□□ -1.01
PTP4A2-220ENST00000627328 WDR70Q9NW82 654 aa8.72□□□□□ -1.01
PTP4A2-220ENST00000627328 TTC24A2A3L6 582 aaPredicted RBP8.71□□□□□ -1.02
PTP4A2-220ENST00000627328 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
PTP4A2-220ENST00000627328 GMPRP36959 345 aa8.7□□□□□ -1.02
PTP4A2-220ENST00000627328 IRF7Q92985 503 aa8.7□□□□□ -1.02
PTP4A2-220ENST00000627328 PRIM1P49642 420 aaKnown RBP8.68□□□□□ -1.02
PTP4A2-220ENST00000627328 E2F4Q16254 413 aa8.68□□□□□ -1.02
PTP4A2-220ENST00000627328 NPAS3Q8IXF0 933 aa8.68□□□□□ -1.02
PTP4A2-220ENST00000627328 EYA1Q99502 592 aa8.68□□□□□ -1.02
PTP4A2-220ENST00000627328 CDHR5Q9HBB8 845 aa8.68□□□□□ -1.02
PTP4A2-220ENST00000627328 PADI6Q6TGC4 694 aa8.67□□□□□ -1.02
PTP4A2-220ENST00000627328 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
PTP4A2-220ENST00000627328 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
PTP4A2-220ENST00000627328 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
PTP4A2-220ENST00000627328 PLCB2Q00722 1185 aa8.65□□□□□ -1.02
PTP4A2-220ENST00000627328 CFHP08603 1231 aa8.63□□□□□ -1.03
PTP4A2-220ENST00000627328 DNAJB2P25686 324 aa8.63□□□□□ -1.03
PTP4A2-220ENST00000627328 SNIP1Q8TAD8 396 aaKnown RBP8.63□□□□□ -1.03
PTP4A2-220ENST00000627328 TSHZ2Q9NRE2 1034 aa8.63□□□□□ -1.03
PTP4A2-220ENST00000627328 SPSB2Q99619 263 aa8.62□□□□□ -1.03
PTP4A2-220ENST00000627328 SMPD1P17405 629 aa8.61□□□□□ -1.03
PTP4A2-220ENST00000627328 KCNMA1Q12791 1236 aa8.61□□□□□ -1.03
PTP4A2-220ENST00000627328 KCTD17Q8N5Z5 321 aa8.61□□□□□ -1.03
PTP4A2-220ENST00000627328 OSBPP22059 807 aa8.6□□□□□ -1.03
PTP4A2-220ENST00000627328 SCUBE3Q8IX30 993 aa8.6□□□□□ -1.03
PTP4A2-220ENST00000627328 TMEM134Q9H6X4 195 aa8.59□□□□□ -1.03
PTP4A2-220ENST00000627328 FCF1Q9Y324 198 aaKnown RBP8.59□□□□□ -1.03
PTP4A2-220ENST00000627328 NPDC1Q9NQX5 325 aaPredicted RBP8.58□□□□□ -1.04
PTP4A2-220ENST00000627328 WNT7AO00755 349 aa8.57□□□□□ -1.04
PTP4A2-220ENST00000627328 ZBTB24O43167 697 aaPredicted RBP8.57□□□□□ -1.04
PTP4A2-220ENST00000627328 H3BM21 787 aa8.55□□□□□ -1.04
PTP4A2-220ENST00000627328 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
PTP4A2-220ENST00000627328 ARHGEF1Q92888 912 aaKnown RBP8.55□□□□□ -1.04
PTP4A2-220ENST00000627328 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
PTP4A2-220ENST00000627328 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
PTP4A2-220ENST00000627328 J3QL48 77 aa8.51□□□□□ -1.05
PTP4A2-220ENST00000627328 HPS1Q92902 700 aa8.51□□□□□ -1.05
PTP4A2-220ENST00000627328 REPIN1Q9BWE0 567 aaKnown RBP8.5□□□□□ -1.05
PTP4A2-220ENST00000627328 ERBB4Q15303 1308 aa8.5□□□□□ -1.05
PTP4A2-220ENST00000627328 SLC10A3P09131 477 aa8.49□□□□□ -1.05
PTP4A2-220ENST00000627328 VEGFBP49765 207 aa8.49□□□□□ -1.05
PTP4A2-220ENST00000627328 GSK3AP49840 483 aa8.49□□□□□ -1.05
PTP4A2-220ENST00000627328 RSPH4AQ5TD94 716 aa8.49□□□□□ -1.05
PTP4A2-220ENST00000627328 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
PTP4A2-220ENST00000627328 GDF11O95390 407 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms