RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 SYCP2Q9BX26 1530 aa5.65□□□□□ -1.5
PTP4A1-205ENST00000626021 MAGI2Q86UL8 1455 aa5.65□□□□□ -1.5
PTP4A1-205ENST00000626021 TEX14Q8IWB6 1497 aa5.65□□□□□ -1.5
PTP4A1-205ENST00000626021 MBD5Q9P267 1494 aa5.65□□□□□ -1.5
PTP4A1-205ENST00000626021 CCDC7Q96M83 1385 aa5.65□□□□□ -1.51
PTP4A1-205ENST00000626021 B4GALNT3Q6L9W6 998 aa5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 KIF12Q96FN5 646 aa5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 EIF2AK4Q9P2K8 1649 aaKnown RBP5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 C9orf84Q5VXU9 1444 aa5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 ANP32AP39687 249 aaKnown RBP5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 MNX1P50219 401 aaPredicted RBP5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 USP35Q9P2H5 1018 aa5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 BCORL1Q5H9F3 1711 aa5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 RPRD2Q5VT52 1461 aaKnown RBP5.64□□□□□ -1.51
PTP4A1-205ENST00000626021 ARHGAP5Q13017 1502 aa5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 FAM205CA6NFA0 338 aa5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 ZBTB47Q9UFB7 747 aaPredicted RBP5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 KIAA1107Q9UPP5 1409 aa5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 TTLL13PA6NNM8 815 aa5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 RTL5Q5HYW3 569 aaPredicted RBP5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 NUDCQ9Y266 331 aa5.63□□□□□ -1.51
PTP4A1-205ENST00000626021 CEP152O94986 1710 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 ZFYVE16Q7Z3T8 1539 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 ARHGEF12Q9NZN5 1544 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 CCDC184Q52MB2 194 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 LAMC1P11047 1609 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 SPATA31E1Q6ZUB1 1445 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 ANKRD30AQ9BXX3 1397 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 SPHKAPQ2M3C7 1700 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 C11orf95C9JLR9 678 aaPredicted RBP5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 MRS2Q9HD23 443 aa5.62□□□□□ -1.51
PTP4A1-205ENST00000626021 DUOX2Q9NRD8 1548 aa5.61□□□□□ -1.51
PTP4A1-205ENST00000626021 WDR7Q9Y4E6 1490 aa5.61□□□□□ -1.51
PTP4A1-205ENST00000626021 PLCG2P16885 1265 aa5.61□□□□□ -1.51
PTP4A1-205ENST00000626021 TET3O43151 1660 aa5.61□□□□□ -1.51
PTP4A1-205ENST00000626021 ARID4BQ4LE39 1312 aaPredicted RBP5.61□□□□□ -1.51
PTP4A1-205ENST00000626021 WASHC2CQ9Y4E1 1318 aa5.61□□□□□ -1.51
PTP4A1-205ENST00000626021 FAM9BQ8IZU0 186 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 TRPC6Q9Y210 931 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 CCDC61Q9Y6R9 512 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 RNF17Q9BXT8 1623 aaKnown RBP5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 ANKRD30BQ9BXX2 1392 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 ANKRD50Q9ULJ7 1429 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 PLEKHD1A6NEE1 506 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 CCDC136Q96JN2 1154 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 ZNF644Q9H582 1327 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 E9PCH4 1651 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 FAM135AQ9P2D6 1515 aa5.6□□□□□ -1.51
PTP4A1-205ENST00000626021 VWDEQ8N2E2 1590 aa5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 KIDINS220Q9ULH0 1771 aa5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 PLCH2O75038 1416 aa5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 TRPM1Q7Z4N2 1603 aa5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 TCERG1O14776 1098 aaKnown RBP5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 PPM1GO15355 546 aaPredicted RBP5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 NBR1Q14596 966 aa5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 CFDP1Q9UEE9 299 aaPredicted RBP5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 IFT172Q9UG01 1749 aa5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 ERBINQ96RT1 1412 aa5.59□□□□□ -1.51
PTP4A1-205ENST00000626021 ARID3CA6NKF2 412 aa5.59□□□□□ -1.52
PTP4A1-205ENST00000626021 MS4A1P11836 297 aa5.59□□□□□ -1.52
PTP4A1-205ENST00000626021 ANO8Q9HCE9 1232 aaPredicted RBP5.59□□□□□ -1.52
PTP4A1-205ENST00000626021 KDM5CP41229 1560 aa5.59□□□□□ -1.52
PTP4A1-205ENST00000626021 MROH1Q8NDA8 1641 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 MAP3K4Q9Y6R4 1608 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 ATP7AQ04656 1500 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 L3MBTL2Q969R5 705 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 RRP7BPQ9NSQ0 103 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 NEURL4Q96JN8 1562 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 DHX29Q7Z478 1369 aaKnown RBP5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 PRDM15P57071 1507 aaPredicted RBP5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 MPHOSPH9Q99550 1183 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 TRIM35Q9UPQ4 493 aa5.58□□□□□ -1.52
PTP4A1-205ENST00000626021 KIF7Q2M1P5 1343 aa5.57□□□□□ -1.52
PTP4A1-205ENST00000626021 KTN1Q86UP2 1357 aaKnown RBP5.57□□□□□ -1.52
PTP4A1-205ENST00000626021 KIF15Q9NS87 1388 aa5.57□□□□□ -1.52
PTP4A1-205ENST00000626021 RICTORQ6R327 1708 aa5.57□□□□□ -1.52
PTP4A1-205ENST00000626021 KIAA1210Q9ULL0 1709 aa5.57□□□□□ -1.52
PTP4A1-205ENST00000626021 RTEL1-TNFRSF6BF6WH68 1400 aa5.57□□□□□ -1.52
PTP4A1-205ENST00000626021 ATP10AO60312 1499 aa5.57□□□□□ -1.52
PTP4A1-205ENST00000626021 ROCK2O75116 1388 aaKnown RBP5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 UHRF1BP1Q6BDS2 1440 aa5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 RALGAPBQ86X10 1494 aa5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 KIF1BO60333 1816 aa5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 NBPF8Q3BBV2 869 aa5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 RSPH4AQ5TD94 716 aa5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 CHIC2Q9UKJ5 165 aa5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 LRPPRCP42704 1394 aaKnown RBP5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 HECW2Q9P2P5 1572 aa5.56□□□□□ -1.52
PTP4A1-205ENST00000626021 TRPM2O94759 1503 aa5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 INSRP06213 1382 aa5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 GLI2P10070 1586 aa5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 IQGAP1P46940 1657 aa5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 ZC3H13Q5T200 1668 aaKnown RBP5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 PNISRQ8TF01 805 aaKnown RBP5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 DDRGK1Q96HY6 314 aa5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 BACH2Q9BYV9 841 aa5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 SALL2Q9Y467 1007 aaPredicted RBP5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 PDE3BQ13370 1112 aa5.55□□□□□ -1.52
PTP4A1-205ENST00000626021 PPRC1Q5VV67 1664 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms