RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 NWD1Q149M9 1564 aa30.12■■■□□ 2.41
R3HCC1-210ENST00000625275 RIMS2Q9UQ26 1411 aa30.09■■■□□ 2.41
R3HCC1-210ENST00000625275 CHD2O14647 1828 aaKnown RBP30.09■■■□□ 2.41
R3HCC1-210ENST00000625275 HSPA1LP34931 641 aa30.09■■■□□ 2.41
R3HCC1-210ENST00000625275 SLC26A8Q96RN1 970 aa30.06■■■□□ 2.4
R3HCC1-210ENST00000625275 PLEKHG1Q9ULL1 1385 aa30.05■■■□□ 2.4
R3HCC1-210ENST00000625275 NKTRP30414 1462 aaKnown RBP30.04■■■□□ 2.4
R3HCC1-210ENST00000625275 KCNA6P17658 529 aa30.02■■■□□ 2.4
R3HCC1-210ENST00000625275 PPP1R15AO75807 674 aaPredicted RBP30■■■□□ 2.39
R3HCC1-210ENST00000625275 CHGAP10645 457 aaKnown RBP30■■■□□ 2.39
R3HCC1-210ENST00000625275 HDGFP51858 240 aaKnown RBP30■■■□□ 2.39
R3HCC1-210ENST00000625275 BCANQ96GW7 911 aa30■■■□□ 2.39
R3HCC1-210ENST00000625275 NAIPQ13075 1403 aa30■■■□□ 2.39
R3HCC1-210ENST00000625275 MED1Q15648 1581 aaPredicted RBP30■■■□□ 2.39
R3HCC1-210ENST00000625275 TMEM94Q12767 1356 aa29.99■■■□□ 2.39
R3HCC1-210ENST00000625275 DIP2AQ14689 1571 aa29.98■■■□□ 2.39
R3HCC1-210ENST00000625275 ILDR2Q71H61 639 aa29.97■■■□□ 2.39
R3HCC1-210ENST00000625275 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.96■■■□□ 2.39
R3HCC1-210ENST00000625275 SENP3Q9H4L4 574 aaPredicted RBP29.94■■■□□ 2.38
R3HCC1-210ENST00000625275 KIF1BO60333 1816 aa29.94■■■□□ 2.38
R3HCC1-210ENST00000625275 PROSER2Q86WR7 435 aaPredicted RBP29.93■■■□□ 2.38
R3HCC1-210ENST00000625275 CLTCL1P53675 1640 aa29.92■■■□□ 2.38
R3HCC1-210ENST00000625275 TRIM26Q12899 539 aaPredicted RBP29.92■■■□□ 2.38
R3HCC1-210ENST00000625275 HFM1A2PYH4 1435 aa29.92■■■□□ 2.38
R3HCC1-210ENST00000625275 TRPM2O94759 1503 aa29.91■■■□□ 2.38
R3HCC1-210ENST00000625275 ADAMTS13Q76LX8 1427 aa29.91■■■□□ 2.38
R3HCC1-210ENST00000625275 ROBO1Q9Y6N7 1651 aa29.89■■■□□ 2.38
R3HCC1-210ENST00000625275 NUTM2DQ5VT03 806 aaPredicted RBP29.87■■■□□ 2.37
R3HCC1-210ENST00000625275 TBX22Q9Y458 520 aa29.87■■■□□ 2.37
R3HCC1-210ENST00000625275 NRXN3Q9Y4C0 1643 aa29.87■■■□□ 2.37
R3HCC1-210ENST00000625275 RBM33Q96EV2 1170 aaKnown RBP29.86■■■□□ 2.37
R3HCC1-210ENST00000625275 FAM135BQ49AJ0 1406 aa29.84■■■□□ 2.37
R3HCC1-210ENST00000625275 MSH6P52701 1360 aa29.83■■■□□ 2.37
R3HCC1-210ENST00000625275 SETBP1Q9Y6X0 1596 aa29.83■■■□□ 2.37
R3HCC1-210ENST00000625275 PIK3R4Q99570 1358 aa29.83■■■□□ 2.37
R3HCC1-210ENST00000625275 NEXMIFQ5QGS0 1516 aa29.8■■■□□ 2.36
R3HCC1-210ENST00000625275 XRN1Q8IZH2 1706 aaKnown RBP29.79■■■□□ 2.36
R3HCC1-210ENST00000625275 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.77■■■□□ 2.36
R3HCC1-210ENST00000625275 NCOA3Q9Y6Q9 1424 aa29.77■■■□□ 2.36
R3HCC1-210ENST00000625275 SOCS7O14512 581 aa29.76■■■□□ 2.35
R3HCC1-210ENST00000625275 ZNF326Q5BKZ1 582 aaKnown RBP29.75■■■□□ 2.35
R3HCC1-210ENST00000625275 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
R3HCC1-210ENST00000625275 PHLPP1O60346 1717 aa29.73■■■□□ 2.35
R3HCC1-210ENST00000625275 PTPRUQ92729 1446 aa29.72■■■□□ 2.35
R3HCC1-210ENST00000625275 PPLO60437 1756 aa29.7■■■□□ 2.34
R3HCC1-210ENST00000625275 SLC4A1APQ9BWU0 796 aaKnown RBP29.68■■■□□ 2.34
R3HCC1-210ENST00000625275 SETD1AO15047 1707 aaKnown RBP29.68■■■□□ 2.34
R3HCC1-210ENST00000625275 C14orf37Q86TY3 774 aa29.67■■■□□ 2.34
R3HCC1-210ENST00000625275 PHF23Q9BUL5 403 aaPredicted RBP29.67■■■□□ 2.34
R3HCC1-210ENST00000625275 SLAIN2Q9P270 581 aa29.67■■■□□ 2.34
R3HCC1-210ENST00000625275 AMOTL2Q9Y2J4 779 aa29.67■■■□□ 2.34
R3HCC1-210ENST00000625275 SETD5Q9C0A6 1442 aa29.64■■■□□ 2.33
R3HCC1-210ENST00000625275 PCGF6Q9BYE7 350 aa29.62■■■□□ 2.33
R3HCC1-210ENST00000625275 COL16A1Q07092 1604 aaPredicted RBP29.61■■■□□ 2.33
R3HCC1-210ENST00000625275 METP08581 1390 aa29.61■■■□□ 2.33
R3HCC1-210ENST00000625275 C19orf44Q9H6X5 657 aa29.61■■■□□ 2.33
R3HCC1-210ENST00000625275 NALCNQ8IZF0 1738 aa29.59■■■□□ 2.33
R3HCC1-210ENST00000625275 CADPS2Q86UW7 1296 aa29.59■■■□□ 2.33
R3HCC1-210ENST00000625275 DCCP43146 1447 aa29.58■■■□□ 2.33
R3HCC1-210ENST00000625275 RAB3GAP2Q9H2M9 1393 aa29.57■■■□□ 2.32
R3HCC1-210ENST00000625275 AHDC1Q5TGY3 1603 aaPredicted RBP29.56■■■□□ 2.32
R3HCC1-210ENST00000625275 ATF3P18847 181 aa29.56■■■□□ 2.32
R3HCC1-210ENST00000625275 IFT172Q9UG01 1749 aa29.56■■■□□ 2.32
R3HCC1-210ENST00000625275 RPGRIP1LQ68CZ1 1315 aa29.53■■■□□ 2.32
R3HCC1-210ENST00000625275 VGFO15240 615 aaPredicted RBP29.53■■■□□ 2.32
R3HCC1-210ENST00000625275 FOXD1Q16676 465 aa29.52■■■□□ 2.32
R3HCC1-210ENST00000625275 CCDC144AA2RUR9 1427 aa29.51■■■□□ 2.32
R3HCC1-210ENST00000625275 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
R3HCC1-210ENST00000625275 SHPRHQ149N8 1683 aa29.5■■■□□ 2.31
R3HCC1-210ENST00000625275 JCADQ9P266 1359 aa29.49■■■□□ 2.31
R3HCC1-210ENST00000625275 NHSL1Q5SYE7 1610 aa29.48■■■□□ 2.31
R3HCC1-210ENST00000625275 MPHOSPH9Q99550 1183 aa29.48■■■□□ 2.31
R3HCC1-210ENST00000625275 PTCH1Q13635 1447 aa29.47■■■□□ 2.31
R3HCC1-210ENST00000625275 MST1RQ04912 1400 aa29.46■■■□□ 2.31
R3HCC1-210ENST00000625275 ASXL1Q8IXJ9 1541 aa29.46■■■□□ 2.31
R3HCC1-210ENST00000625275 PRAG1Q86YV5 1406 aa29.45■■■□□ 2.31
R3HCC1-210ENST00000625275 SPATA31E1Q6ZUB1 1445 aa29.44■■■□□ 2.3
R3HCC1-210ENST00000625275 RGS17Q9UGC6 210 aaPredicted RBP29.43■■■□□ 2.3
R3HCC1-210ENST00000625275 ACIN1Q9UKV3 1341 aaKnown RBP29.43■■■□□ 2.3
R3HCC1-210ENST00000625275 HRCP23327 699 aa29.42■■■□□ 2.3
R3HCC1-210ENST00000625275 BRINP3Q76B58 766 aa29.42■■■□□ 2.3
R3HCC1-210ENST00000625275 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
R3HCC1-210ENST00000625275 KNDC1Q76NI1 1749 aa29.36■■■□□ 2.29
R3HCC1-210ENST00000625275 ANKRD30BQ9BXX2 1392 aa29.36■■■□□ 2.29
R3HCC1-210ENST00000625275 LRP6O75581 1613 aa29.35■■■□□ 2.29
R3HCC1-210ENST00000625275 RGL3Q3MIN7 710 aa29.34■■■□□ 2.29
R3HCC1-210ENST00000625275 SPATA31A6Q5VVP1 1343 aa29.34■■■□□ 2.29
R3HCC1-210ENST00000625275 ADGRF5Q8IZF2 1346 aa29.34■■■□□ 2.29
R3HCC1-210ENST00000625275 LAMC1P11047 1609 aa29.33■■■□□ 2.29
R3HCC1-210ENST00000625275 C1orf167Q5SNV9 1468 aa29.3■■■□□ 2.28
R3HCC1-210ENST00000625275 PIK3C2GO75747 1445 aa29.3■■■□□ 2.28
R3HCC1-210ENST00000625275 CDC42BPGQ6DT37 1551 aa29.29■■■□□ 2.28
R3HCC1-210ENST00000625275 POTEAQ6S8J7 498 aa29.28■■■□□ 2.28
R3HCC1-210ENST00000625275 TECPR2O15040 1411 aa29.26■■■□□ 2.27
R3HCC1-210ENST00000625275 MYOM2P54296 1465 aa29.23■■■□□ 2.27
R3HCC1-210ENST00000625275 LRPPRCP42704 1394 aaKnown RBP29.22■■■□□ 2.27
R3HCC1-210ENST00000625275 MEX3CQ5U5Q3 659 aaKnown RBP29.21■■■□□ 2.27
R3HCC1-210ENST00000625275 NRXN1Q9ULB1 1477 aa29.21■■■□□ 2.27
R3HCC1-210ENST00000625275 DDX17Q92841 729 aaKnown RBP29.19■■■□□ 2.26
R3HCC1-210ENST00000625275 LRRC59Q96AG4 307 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms