RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-215ENST00000624193 SLC52A1Q9NWF4 448 aa23.87■■□□□ 1.41
ATRX-215ENST00000624193 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
ATRX-215ENST00000624193 BCANQ96GW7 911 aa23.86■■□□□ 1.41
ATRX-215ENST00000624193 GCC2Q8IWJ2 1684 aa23.86■■□□□ 1.41
ATRX-215ENST00000624193 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
ATRX-215ENST00000624193 FAM50AQ14320 339 aaKnown RBP23.84■■□□□ 1.41
ATRX-215ENST00000624193 ZFYVE9O95405 1425 aa23.83■■□□□ 1.4
ATRX-215ENST00000624193 MSH6P52701 1360 aa23.81■■□□□ 1.4
ATRX-215ENST00000624193 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
ATRX-215ENST00000624193 TMEM131LA2VDJ0 1609 aa23.8■■□□□ 1.4
ATRX-215ENST00000624193 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
ATRX-215ENST00000624193 RIMS2Q9UQ26 1411 aa23.79■■□□□ 1.4
ATRX-215ENST00000624193 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
ATRX-215ENST00000624193 PPP1R15AO75807 674 aaPredicted RBP23.78■■□□□ 1.4
ATRX-215ENST00000624193 UNC13BO14795 1591 aa23.78■■□□□ 1.4
ATRX-215ENST00000624193 POTEAQ6S8J7 498 aa23.76■■□□□ 1.39
ATRX-215ENST00000624193 SLAIN2Q9P270 581 aa23.75■■□□□ 1.39
ATRX-215ENST00000624193 E9PCH4 1651 aa23.73■■□□□ 1.39
ATRX-215ENST00000624193 HDGFP51858 240 aaKnown RBP23.73■■□□□ 1.39
ATRX-215ENST00000624193 CHGAP10645 457 aaKnown RBP23.7■■□□□ 1.38
ATRX-215ENST00000624193 TBX22Q9Y458 520 aa23.69■■□□□ 1.38
ATRX-215ENST00000624193 COL16A1Q07092 1604 aaPredicted RBP23.69■■□□□ 1.38
ATRX-215ENST00000624193 JCADQ9P266 1359 aa23.68■■□□□ 1.38
ATRX-215ENST00000624193 IQGAP3Q86VI3 1631 aa23.68■■□□□ 1.38
ATRX-215ENST00000624193 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
ATRX-215ENST00000624193 DIP2AQ14689 1571 aa23.67■■□□□ 1.38
ATRX-215ENST00000624193 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.67■■□□□ 1.38
ATRX-215ENST00000624193 NUTM2DQ5VT03 806 aaPredicted RBP23.66■■□□□ 1.38
ATRX-215ENST00000624193 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
ATRX-215ENST00000624193 SETD1AO15047 1707 aaKnown RBP23.66■■□□□ 1.38
ATRX-215ENST00000624193 NCOA3Q9Y6Q9 1424 aa23.66■■□□□ 1.38
ATRX-215ENST00000624193 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.64■■□□□ 1.38
ATRX-215ENST00000624193 ROCK1Q13464 1354 aa23.63■■□□□ 1.37
ATRX-215ENST00000624193 TRPM2O94759 1503 aa23.61■■□□□ 1.37
ATRX-215ENST00000624193 PIK3R4Q99570 1358 aa23.61■■□□□ 1.37
ATRX-215ENST00000624193 LRP6O75581 1613 aa23.59■■□□□ 1.37
ATRX-215ENST00000624193 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
ATRX-215ENST00000624193 NUP155O75694 1391 aa23.58■■□□□ 1.37
ATRX-215ENST00000624193 CADPS2Q86UW7 1296 aa23.58■■□□□ 1.37
ATRX-215ENST00000624193 C19orf44Q9H6X5 657 aa23.58■■□□□ 1.37
ATRX-215ENST00000624193 ATF3P18847 181 aa23.57■■□□□ 1.36
ATRX-215ENST00000624193 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
ATRX-215ENST00000624193 SPATA31A6Q5VVP1 1343 aa23.57■■□□□ 1.36
ATRX-215ENST00000624193 PTPRUQ92729 1446 aa23.55■■□□□ 1.36
ATRX-215ENST00000624193 MEX3CQ5U5Q3 659 aaKnown RBP23.54■■□□□ 1.36
ATRX-215ENST00000624193 AMOTL2Q9Y2J4 779 aa23.54■■□□□ 1.36
ATRX-215ENST00000624193 NRXN3Q9Y4C0 1643 aa23.54■■□□□ 1.36
ATRX-215ENST00000624193 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
ATRX-215ENST00000624193 XRN1Q8IZH2 1706 aaKnown RBP23.53■■□□□ 1.36
ATRX-215ENST00000624193 ITGAEP38570 1179 aa23.52■■□□□ 1.36
ATRX-215ENST00000624193 SETBP1Q9Y6X0 1596 aa23.51■■□□□ 1.35
ATRX-215ENST00000624193 BRINP3Q76B58 766 aa23.49■■□□□ 1.35
ATRX-215ENST00000624193 DCCP43146 1447 aa23.49■■□□□ 1.35
ATRX-215ENST00000624193 ZNF772Q68DY9 489 aaPredicted RBP23.48■■□□□ 1.35
ATRX-215ENST00000624193 ASXL1Q8IXJ9 1541 aa23.47■■□□□ 1.35
ATRX-215ENST00000624193 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
ATRX-215ENST00000624193 TRIM52Q96A61 297 aa23.44■■□□□ 1.34
ATRX-215ENST00000624193 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
ATRX-215ENST00000624193 MST1RQ04912 1400 aa23.43■■□□□ 1.34
ATRX-215ENST00000624193 METP08581 1390 aa23.42■■□□□ 1.34
ATRX-215ENST00000624193 NUTM2BA6NNL0 878 aaPredicted RBP23.42■■□□□ 1.34
ATRX-215ENST00000624193 NUTM2EB1AL46 878 aaPredicted RBP23.42■■□□□ 1.34
ATRX-215ENST00000624193 NUTM2AQ8IVF1 878 aaPredicted RBP23.42■■□□□ 1.34
ATRX-215ENST00000624193 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
ATRX-215ENST00000624193 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
ATRX-215ENST00000624193 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
ATRX-215ENST00000624193 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.34
ATRX-215ENST00000624193 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.34
ATRX-215ENST00000624193 ADGRL3Q9HAR2 1447 aa23.38■■□□□ 1.33
ATRX-215ENST00000624193 UPF1Q92900 1129 aaKnown RBP eCLIP23.37■■□□□ 1.33
ATRX-215ENST00000624193 RXRBP28702 533 aa23.36■■□□□ 1.33
ATRX-215ENST00000624193 KIF1BO60333 1816 aa23.36■■□□□ 1.33
ATRX-215ENST00000624193 AFF2P51816 1311 aa23.34■■□□□ 1.33
ATRX-215ENST00000624193 CDK12Q9NYV4 1490 aaPredicted RBP23.33■■□□□ 1.33
ATRX-215ENST00000624193 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
ATRX-215ENST00000624193 LRRC59Q96AG4 307 aaKnown RBP23.33■■□□□ 1.33
ATRX-215ENST00000624193 PNPLA6Q8IY17 1366 aa23.31■■□□□ 1.32
ATRX-215ENST00000624193 C8orf37Q96NL8 207 aa23.28■■□□□ 1.32
ATRX-215ENST00000624193 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
ATRX-215ENST00000624193 NAIPQ13075 1403 aa23.26■■□□□ 1.31
ATRX-215ENST00000624193 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
ATRX-215ENST00000624193 LAMC1P11047 1609 aa23.26■■□□□ 1.31
ATRX-215ENST00000624193 RGS12O14924 1447 aa23.24■■□□□ 1.31
ATRX-215ENST00000624193 RRBP1Q9P2E9 1410 aaKnown RBP23.24■■□□□ 1.31
ATRX-215ENST00000624193 ROBO2Q9HCK4 1378 aa23.23■■□□□ 1.31
ATRX-215ENST00000624193 QTRT2Q9H974 415 aaKnown RBP23.22■■□□□ 1.31
ATRX-215ENST00000624193 VGFO15240 615 aaPredicted RBP23.21■■□□□ 1.31
ATRX-215ENST00000624193 PPLO60437 1756 aa23.2■■□□□ 1.3
ATRX-215ENST00000624193 ADAMTS2O95450 1211 aa23.2■■□□□ 1.3
ATRX-215ENST00000624193 RBM6P78332 1123 aaKnown RBP23.2■■□□□ 1.3
ATRX-215ENST00000624193 PRAG1Q86YV5 1406 aa23.19■■□□□ 1.3
ATRX-215ENST00000624193 ORAI2Q96SN7 254 aa23.19■■□□□ 1.3
ATRX-215ENST00000624193 NGLY1Q96IV0 654 aa23.18■■□□□ 1.3
ATRX-215ENST00000624193 SOS2Q07890 1332 aaPredicted RBP23.17■■□□□ 1.3
ATRX-215ENST00000624193 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
ATRX-215ENST00000624193 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
ATRX-215ENST00000624193 COL22A1Q8NFW1 1626 aaPredicted RBP23.13■■□□□ 1.29
ATRX-215ENST00000624193 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
ATRX-215ENST00000624193 CDC42BPGQ6DT37 1551 aa23.12■■□□□ 1.29
ATRX-215ENST00000624193 USP21Q9UK80 565 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms