RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
RPL13A-214ENST00000624069 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
RPL13A-214ENST00000624069 ANKRD30AQ9BXX3 1397 aa22.84■■□□□ 1.25
RPL13A-214ENST00000624069 CHIC2Q9UKJ5 165 aa22.83■■□□□ 1.25
RPL13A-214ENST00000624069 ERBINQ96RT1 1412 aa22.82■■□□□ 1.24
RPL13A-214ENST00000624069 LRP6O75581 1613 aa22.82■■□□□ 1.24
RPL13A-214ENST00000624069 NWD1Q149M9 1564 aa22.81■■□□□ 1.24
RPL13A-214ENST00000624069 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
RPL13A-214ENST00000624069 BCANQ96GW7 911 aa22.81■■□□□ 1.24
RPL13A-214ENST00000624069 PHLPP1O60346 1717 aa22.81■■□□□ 1.24
RPL13A-214ENST00000624069 KANK1Q14678 1352 aa22.8■■□□□ 1.24
RPL13A-214ENST00000624069 ITGAEP38570 1179 aa22.8■■□□□ 1.24
RPL13A-214ENST00000624069 RXRBP28702 533 aa22.78■■□□□ 1.24
RPL13A-214ENST00000624069 KDM5AP29375 1690 aaKnown RBP22.77■■□□□ 1.24
RPL13A-214ENST00000624069 NOS1P29475 1434 aa22.77■■□□□ 1.24
RPL13A-214ENST00000624069 SLC52A1Q9NWF4 448 aa22.77■■□□□ 1.24
RPL13A-214ENST00000624069 COL16A1Q07092 1604 aaPredicted RBP22.77■■□□□ 1.24
RPL13A-214ENST00000624069 ROCK1Q13464 1354 aa22.76■■□□□ 1.23
RPL13A-214ENST00000624069 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
RPL13A-214ENST00000624069 NCOA3Q9Y6Q9 1424 aa22.74■■□□□ 1.23
RPL13A-214ENST00000624069 TBX22Q9Y458 520 aa22.72■■□□□ 1.23
RPL13A-214ENST00000624069 PLEKHG1Q9ULL1 1385 aa22.72■■□□□ 1.23
RPL13A-214ENST00000624069 ADGRB3O60242 1522 aa22.71■■□□□ 1.23
RPL13A-214ENST00000624069 CADPS2Q86UW7 1296 aa22.7■■□□□ 1.22
RPL13A-214ENST00000624069 C19orf44Q9H6X5 657 aa22.7■■□□□ 1.22
RPL13A-214ENST00000624069 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
RPL13A-214ENST00000624069 C14orf37Q86TY3 774 aa22.69■■□□□ 1.22
RPL13A-214ENST00000624069 CDK12Q9NYV4 1490 aaPredicted RBP22.68■■□□□ 1.22
RPL13A-214ENST00000624069 ANKRD50Q9ULJ7 1429 aa22.68■■□□□ 1.22
RPL13A-214ENST00000624069 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
RPL13A-214ENST00000624069 NUTM2BA6NNL0 878 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-214ENST00000624069 NUTM2EB1AL46 878 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-214ENST00000624069 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-214ENST00000624069 ATF3P18847 181 aa22.66■■□□□ 1.22
RPL13A-214ENST00000624069 NUTM2AQ8IVF1 878 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-214ENST00000624069 AHDC1Q5TGY3 1603 aaPredicted RBP22.65■■□□□ 1.22
RPL13A-214ENST00000624069 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
RPL13A-214ENST00000624069 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
RPL13A-214ENST00000624069 CHD2O14647 1828 aaKnown RBP22.64■■□□□ 1.22
RPL13A-214ENST00000624069 AFF2P51816 1311 aa22.63■■□□□ 1.21
RPL13A-214ENST00000624069 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
RPL13A-214ENST00000624069 SHPRHQ149N8 1683 aa22.61■■□□□ 1.21
RPL13A-214ENST00000624069 ADAMTS13Q76LX8 1427 aa22.6■■□□□ 1.21
RPL13A-214ENST00000624069 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
RPL13A-214ENST00000624069 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
RPL13A-214ENST00000624069 NAIPQ13075 1403 aa22.58■■□□□ 1.21
RPL13A-214ENST00000624069 DIP2AQ14689 1571 aa22.58■■□□□ 1.2
RPL13A-214ENST00000624069 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
RPL13A-214ENST00000624069 QTRT2Q9H974 415 aaKnown RBP22.57■■□□□ 1.2
RPL13A-214ENST00000624069 PIK3R4Q99570 1358 aa22.57■■□□□ 1.2
RPL13A-214ENST00000624069 UNC13BO14795 1591 aa22.57■■□□□ 1.2
RPL13A-214ENST00000624069 RPRD2Q5VT52 1461 aaKnown RBP22.56■■□□□ 1.2
RPL13A-214ENST00000624069 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
RPL13A-214ENST00000624069 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.56■■□□□ 1.2
RPL13A-214ENST00000624069 RGS12O14924 1447 aa22.56■■□□□ 1.2
RPL13A-214ENST00000624069 AMOTL2Q9Y2J4 779 aa22.55■■□□□ 1.2
RPL13A-214ENST00000624069 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
RPL13A-214ENST00000624069 CHGAP10645 457 aaKnown RBP22.53■■□□□ 1.2
RPL13A-214ENST00000624069 LRRC59Q96AG4 307 aaKnown RBP22.53■■□□□ 1.2
RPL13A-214ENST00000624069 C8orf37Q96NL8 207 aa22.52■■□□□ 1.2
RPL13A-214ENST00000624069 TMEM131LA2VDJ0 1609 aa22.51■■□□□ 1.19
RPL13A-214ENST00000624069 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
RPL13A-214ENST00000624069 DCCP43146 1447 aa22.48■■□□□ 1.19
RPL13A-214ENST00000624069 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
RPL13A-214ENST00000624069 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
RPL13A-214ENST00000624069 DDX17Q92841 729 aaKnown RBP22.46■■□□□ 1.19
RPL13A-214ENST00000624069 PNPLA6Q8IY17 1366 aa22.46■■□□□ 1.19
RPL13A-214ENST00000624069 MST1RQ04912 1400 aa22.46■■□□□ 1.19
RPL13A-214ENST00000624069 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.19
RPL13A-214ENST00000624069 SRCAPQ6ZRS2 3230 aa22.45■■□□□ 1.18
RPL13A-214ENST00000624069 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
RPL13A-214ENST00000624069 NUP155O75694 1391 aa22.44■■□□□ 1.18
RPL13A-214ENST00000624069 ATAD2Q6PL18 1390 aa22.42■■□□□ 1.18
RPL13A-214ENST00000624069 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
RPL13A-214ENST00000624069 TRPM2O94759 1503 aa22.41■■□□□ 1.18
RPL13A-214ENST00000624069 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
RPL13A-214ENST00000624069 FOXD1Q16676 465 aa22.38■■□□□ 1.17
RPL13A-214ENST00000624069 NHSL1Q5SYE7 1610 aa22.37■■□□□ 1.17
RPL13A-214ENST00000624069 USP21Q9UK80 565 aa22.36■■□□□ 1.17
RPL13A-214ENST00000624069 TRPC5Q9UL62 973 aaPredicted RBP22.36■■□□□ 1.17
RPL13A-214ENST00000624069 RAB3GAP2Q9H2M9 1393 aa22.35■■□□□ 1.17
RPL13A-214ENST00000624069 E9PCH4 1651 aa22.34■■□□□ 1.17
RPL13A-214ENST00000624069 FNBP4Q8N3X1 1017 aaPredicted RBP22.34■■□□□ 1.17
RPL13A-214ENST00000624069 METP08581 1390 aa22.34■■□□□ 1.17
RPL13A-214ENST00000624069 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
RPL13A-214ENST00000624069 ADGRL3Q9HAR2 1447 aa22.31■■□□□ 1.16
RPL13A-214ENST00000624069 SETBP1Q9Y6X0 1596 aa22.31■■□□□ 1.16
RPL13A-214ENST00000624069 CCDC125Q86Z20 511 aa22.31■■□□□ 1.16
RPL13A-214ENST00000624069 XRN1Q8IZH2 1706 aaKnown RBP22.31■■□□□ 1.16
RPL13A-214ENST00000624069 SOS2Q07890 1332 aaPredicted RBP22.31■■□□□ 1.16
RPL13A-214ENST00000624069 TRIM26Q12899 539 aaPredicted RBP22.3■■□□□ 1.16
RPL13A-214ENST00000624069 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
RPL13A-214ENST00000624069 ATRNO75882 1429 aa22.28■■□□□ 1.16
RPL13A-214ENST00000624069 ORAI2Q96SN7 254 aa22.27■■□□□ 1.16
RPL13A-214ENST00000624069 NRXN3Q9Y4C0 1643 aa22.27■■□□□ 1.16
RPL13A-214ENST00000624069 PTCH1Q13635 1447 aa22.26■■□□□ 1.15
RPL13A-214ENST00000624069 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
RPL13A-214ENST00000624069 SPHKAPQ2M3C7 1700 aa22.24■■□□□ 1.15
RPL13A-214ENST00000624069 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
RPL13A-214ENST00000624069 HRCP23327 699 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms