RNA–Protein interactions for RNA: ENST00000622961.3

CR381653.1-201, humanhuman

TSL 3 BASIC

Gene CR381653.1, Length 812 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR381653.1-201ENST00000622961 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
CR381653.1-201ENST00000622961 STAG3Q9UJ98 1225 aa22.9■■□□□ 1.26
CR381653.1-201ENST00000622961 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.26
CR381653.1-201ENST00000622961 NKTRP30414 1462 aaKnown RBP22.87■■□□□ 1.25
CR381653.1-201ENST00000622961 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
CR381653.1-201ENST00000622961 RIMS2Q9UQ26 1411 aa22.83■■□□□ 1.25
CR381653.1-201ENST00000622961 PPARGC1BQ86YN6 1023 aaKnown RBP22.83■■□□□ 1.25
CR381653.1-201ENST00000622961 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
CR381653.1-201ENST00000622961 DIP2AQ14689 1571 aa22.81■■□□□ 1.24
CR381653.1-201ENST00000622961 PLEKHG1Q9ULL1 1385 aa22.81■■□□□ 1.24
CR381653.1-201ENST00000622961 ROBO1Q9Y6N7 1651 aa22.8■■□□□ 1.24
CR381653.1-201ENST00000622961 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
CR381653.1-201ENST00000622961 SLC26A8Q96RN1 970 aa22.79■■□□□ 1.24
CR381653.1-201ENST00000622961 ITGAEP38570 1179 aa22.78■■□□□ 1.24
CR381653.1-201ENST00000622961 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
CR381653.1-201ENST00000622961 NUP155O75694 1391 aa22.77■■□□□ 1.24
CR381653.1-201ENST00000622961 KCNA6P17658 529 aa22.76■■□□□ 1.23
CR381653.1-201ENST00000622961 CLTCL1P53675 1640 aa22.75■■□□□ 1.23
CR381653.1-201ENST00000622961 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
CR381653.1-201ENST00000622961 SOCS7O14512 581 aa22.74■■□□□ 1.23
CR381653.1-201ENST00000622961 NAIPQ13075 1403 aa22.72■■□□□ 1.23
CR381653.1-201ENST00000622961 TRPM2O94759 1503 aa22.72■■□□□ 1.23
CR381653.1-201ENST00000622961 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
CR381653.1-201ENST00000622961 KIF1BO60333 1816 aa22.71■■□□□ 1.23
CR381653.1-201ENST00000622961 SETBP1Q9Y6X0 1596 aa22.7■■□□□ 1.22
CR381653.1-201ENST00000622961 FAM135BQ49AJ0 1406 aa22.69■■□□□ 1.22
CR381653.1-201ENST00000622961 PPP1R15AO75807 674 aaPredicted RBP22.68■■□□□ 1.22
CR381653.1-201ENST00000622961 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
CR381653.1-201ENST00000622961 RBM33Q96EV2 1170 aaKnown RBP22.67■■□□□ 1.22
CR381653.1-201ENST00000622961 PHLPP1O60346 1717 aa22.67■■□□□ 1.22
CR381653.1-201ENST00000622961 CHGAP10645 457 aaKnown RBP22.66■■□□□ 1.22
CR381653.1-201ENST00000622961 PROSER2Q86WR7 435 aaPredicted RBP22.66■■□□□ 1.22
CR381653.1-201ENST00000622961 NEXMIFQ5QGS0 1516 aa22.66■■□□□ 1.22
CR381653.1-201ENST00000622961 BCANQ96GW7 911 aa22.65■■□□□ 1.22
CR381653.1-201ENST00000622961 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.64■■□□□ 1.21
CR381653.1-201ENST00000622961 MSH6P52701 1360 aa22.63■■□□□ 1.21
CR381653.1-201ENST00000622961 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
CR381653.1-201ENST00000622961 PIK3R4Q99570 1358 aa22.63■■□□□ 1.21
CR381653.1-201ENST00000622961 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
CR381653.1-201ENST00000622961 COL16A1Q07092 1604 aaPredicted RBP22.62■■□□□ 1.21
CR381653.1-201ENST00000622961 NUTM2DQ5VT03 806 aaPredicted RBP22.62■■□□□ 1.21
CR381653.1-201ENST00000622961 TBX22Q9Y458 520 aa22.62■■□□□ 1.21
CR381653.1-201ENST00000622961 HDGFP51858 240 aaKnown RBP22.61■■□□□ 1.21
CR381653.1-201ENST00000622961 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
CR381653.1-201ENST00000622961 NCOA3Q9Y6Q9 1424 aa22.59■■□□□ 1.21
CR381653.1-201ENST00000622961 PPLO60437 1756 aa22.58■■□□□ 1.2
CR381653.1-201ENST00000622961 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
CR381653.1-201ENST00000622961 PIAS4Q8N2W9 510 aaPredicted RBP22.55■■□□□ 1.2
CR381653.1-201ENST00000622961 AHDC1Q5TGY3 1603 aaPredicted RBP22.55■■□□□ 1.2
CR381653.1-201ENST00000622961 MSH5O43196 834 aa22.54■■□□□ 1.2
CR381653.1-201ENST00000622961 SHPRHQ149N8 1683 aa22.52■■□□□ 1.2
CR381653.1-201ENST00000622961 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
CR381653.1-201ENST00000622961 ADRA2BP18089 450 aa22.5■■□□□ 1.19
CR381653.1-201ENST00000622961 NHSL1Q5SYE7 1610 aa22.49■■□□□ 1.19
CR381653.1-201ENST00000622961 SLAIN2Q9P270 581 aa22.49■■□□□ 1.19
CR381653.1-201ENST00000622961 DCCP43146 1447 aa22.48■■□□□ 1.19
CR381653.1-201ENST00000622961 METP08581 1390 aa22.48■■□□□ 1.19
CR381653.1-201ENST00000622961 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
CR381653.1-201ENST00000622961 AMOTL2Q9Y2J4 779 aa22.46■■□□□ 1.19
CR381653.1-201ENST00000622961 RGS17Q9UGC6 210 aaPredicted RBP22.45■■□□□ 1.18
CR381653.1-201ENST00000622961 ASXL1Q8IXJ9 1541 aa22.44■■□□□ 1.18
CR381653.1-201ENST00000622961 C14orf37Q86TY3 774 aa22.43■■□□□ 1.18
CR381653.1-201ENST00000622961 LRP6O75581 1613 aa22.42■■□□□ 1.18
CR381653.1-201ENST00000622961 ADGRL3Q9HAR2 1447 aa22.42■■□□□ 1.18
CR381653.1-201ENST00000622961 C19orf44Q9H6X5 657 aa22.42■■□□□ 1.18
CR381653.1-201ENST00000622961 MST1RQ04912 1400 aa22.41■■□□□ 1.18
CR381653.1-201ENST00000622961 PRAG1Q86YV5 1406 aa22.41■■□□□ 1.18
CR381653.1-201ENST00000622961 JCADQ9P266 1359 aa22.41■■□□□ 1.18
CR381653.1-201ENST00000622961 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
CR381653.1-201ENST00000622961 CADPS2Q86UW7 1296 aa22.4■■□□□ 1.18
CR381653.1-201ENST00000622961 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
CR381653.1-201ENST00000622961 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
CR381653.1-201ENST00000622961 LAMC1P11047 1609 aa22.38■■□□□ 1.17
CR381653.1-201ENST00000622961 ATF3P18847 181 aa22.37■■□□□ 1.17
CR381653.1-201ENST00000622961 KNDC1Q76NI1 1749 aa22.35■■□□□ 1.17
CR381653.1-201ENST00000622961 BRINP3Q76B58 766 aa22.34■■□□□ 1.17
CR381653.1-201ENST00000622961 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
CR381653.1-201ENST00000622961 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
CR381653.1-201ENST00000622961 ROBO2Q9HCK4 1378 aa22.31■■□□□ 1.16
CR381653.1-201ENST00000622961 POTEAQ6S8J7 498 aa22.31■■□□□ 1.16
CR381653.1-201ENST00000622961 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
CR381653.1-201ENST00000622961 CDC42BPGQ6DT37 1551 aa22.3■■□□□ 1.16
CR381653.1-201ENST00000622961 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
CR381653.1-201ENST00000622961 SPATA31A6Q5VVP1 1343 aa22.29■■□□□ 1.16
CR381653.1-201ENST00000622961 VGFO15240 615 aaPredicted RBP22.28■■□□□ 1.16
CR381653.1-201ENST00000622961 C1orf167Q5SNV9 1468 aa22.26■■□□□ 1.15
CR381653.1-201ENST00000622961 TECPR2O15040 1411 aa22.23■■□□□ 1.15
CR381653.1-201ENST00000622961 PIK3C2GO75747 1445 aa22.23■■□□□ 1.15
CR381653.1-201ENST00000622961 MPHOSPH9Q99550 1183 aa22.22■■□□□ 1.15
CR381653.1-201ENST00000622961 FMN2Q9NZ56 1722 aa22.21■■□□□ 1.15
CR381653.1-201ENST00000622961 ADGRF5Q8IZF2 1346 aa22.21■■□□□ 1.15
CR381653.1-201ENST00000622961 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
CR381653.1-201ENST00000622961 PNPLA6Q8IY17 1366 aa22.19■■□□□ 1.14
CR381653.1-201ENST00000622961 ANKRD30BQ9BXX2 1392 aa22.19■■□□□ 1.14
CR381653.1-201ENST00000622961 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
CR381653.1-201ENST00000622961 MYOM2P54296 1465 aa22.17■■□□□ 1.14
CR381653.1-201ENST00000622961 DDX17Q92841 729 aaKnown RBP22.17■■□□□ 1.14
CR381653.1-201ENST00000622961 POTEDQ86YR6 584 aa22.16■■□□□ 1.14
CR381653.1-201ENST00000622961 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
CR381653.1-201ENST00000622961 MARF1Q9Y4F3 1742 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms