RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 UNC13BO14795 1591 aa31.08■■■□□ 2.57
ITM2C-210ENST00000620962 MYO5BQ9ULV0 1848 aa31.07■■■□□ 2.56
ITM2C-210ENST00000620962 ZFYVE9O95405 1425 aa31.06■■■□□ 2.56
ITM2C-210ENST00000620962 PROSER2Q86WR7 435 aaPredicted RBP31.04■■■□□ 2.56
ITM2C-210ENST00000620962 TMEM131LA2VDJ0 1609 aa31.03■■■□□ 2.56
ITM2C-210ENST00000620962 PLEKHG1Q9ULL1 1385 aa31.02■■■□□ 2.56
ITM2C-210ENST00000620962 ROBO1Q9Y6N7 1651 aa31■■■□□ 2.55
ITM2C-210ENST00000620962 ROCK1Q13464 1354 aa31■■■□□ 2.55
ITM2C-210ENST00000620962 CHD2O14647 1828 aaKnown RBP30.99■■■□□ 2.55
ITM2C-210ENST00000620962 RIMS2Q9UQ26 1411 aa30.98■■■□□ 2.55
ITM2C-210ENST00000620962 HDGFP51858 240 aaKnown RBP30.98■■■□□ 2.55
ITM2C-210ENST00000620962 E9PCH4 1651 aa30.97■■■□□ 2.55
ITM2C-210ENST00000620962 BCANQ96GW7 911 aa30.97■■■□□ 2.55
ITM2C-210ENST00000620962 IQGAP3Q86VI3 1631 aa30.95■■■□□ 2.55
ITM2C-210ENST00000620962 RBM33Q96EV2 1170 aaKnown RBP30.94■■■□□ 2.54
ITM2C-210ENST00000620962 MSH6P52701 1360 aa30.93■■■□□ 2.54
ITM2C-210ENST00000620962 PPP1R15AO75807 674 aaPredicted RBP30.92■■■□□ 2.54
ITM2C-210ENST00000620962 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.9■■■□□ 2.54
ITM2C-210ENST00000620962 RGS17Q9UGC6 210 aaPredicted RBP30.9■■■□□ 2.54
ITM2C-210ENST00000620962 TBX22Q9Y458 520 aa30.9■■■□□ 2.54
ITM2C-210ENST00000620962 DIP2AQ14689 1571 aa30.88■■■□□ 2.53
ITM2C-210ENST00000620962 NCOA3Q9Y6Q9 1424 aa30.87■■■□□ 2.53
ITM2C-210ENST00000620962 ADAMTS13Q76LX8 1427 aa30.84■■■□□ 2.53
ITM2C-210ENST00000620962 CHGAP10645 457 aaKnown RBP30.84■■■□□ 2.53
ITM2C-210ENST00000620962 SLAIN2Q9P270 581 aa30.84■■■□□ 2.53
ITM2C-210ENST00000620962 PHLPP1O60346 1717 aa30.82■■■□□ 2.52
ITM2C-210ENST00000620962 NUP155O75694 1391 aa30.81■■■□□ 2.52
ITM2C-210ENST00000620962 PIK3R4Q99570 1358 aa30.81■■■□□ 2.52
ITM2C-210ENST00000620962 TRPM2O94759 1503 aa30.74■■■□□ 2.51
ITM2C-210ENST00000620962 NUTM2DQ5VT03 806 aaPredicted RBP30.74■■■□□ 2.51
ITM2C-210ENST00000620962 JCADQ9P266 1359 aa30.74■■■□□ 2.51
ITM2C-210ENST00000620962 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.73■■■□□ 2.51
ITM2C-210ENST00000620962 SPHKAPQ2M3C7 1700 aa30.73■■■□□ 2.51
ITM2C-210ENST00000620962 COL16A1Q07092 1604 aaPredicted RBP30.73■■■□□ 2.51
ITM2C-210ENST00000620962 ITGAEP38570 1179 aa30.71■■■□□ 2.51
ITM2C-210ENST00000620962 POTEAQ6S8J7 498 aa30.71■■■□□ 2.51
ITM2C-210ENST00000620962 C19orf44Q9H6X5 657 aa30.7■■■□□ 2.51
ITM2C-210ENST00000620962 C14orf37Q86TY3 774 aa30.69■■■□□ 2.5
ITM2C-210ENST00000620962 CADPS2Q86UW7 1296 aa30.69■■■□□ 2.5
ITM2C-210ENST00000620962 SETBP1Q9Y6X0 1596 aa30.66■■■□□ 2.5
ITM2C-210ENST00000620962 AHDC1Q5TGY3 1603 aaPredicted RBP30.66■■■□□ 2.5
ITM2C-210ENST00000620962 NRXN3Q9Y4C0 1643 aa30.66■■■□□ 2.5
ITM2C-210ENST00000620962 PTPRUQ92729 1446 aa30.66■■■□□ 2.5
ITM2C-210ENST00000620962 AMOTL2Q9Y2J4 779 aa30.65■■■□□ 2.5
ITM2C-210ENST00000620962 ATF3P18847 181 aa30.64■■■□□ 2.5
ITM2C-210ENST00000620962 XRN1Q8IZH2 1706 aaKnown RBP30.64■■■□□ 2.5
ITM2C-210ENST00000620962 DCCP43146 1447 aa30.61■■■□□ 2.49
ITM2C-210ENST00000620962 SPATA31A6Q5VVP1 1343 aa30.6■■■□□ 2.49
ITM2C-210ENST00000620962 SHPRHQ149N8 1683 aa30.58■■■□□ 2.49
ITM2C-210ENST00000620962 PPARGC1BQ86YN6 1023 aaKnown RBP30.58■■■□□ 2.49
ITM2C-210ENST00000620962 RRBP1Q9P2E9 1410 aaKnown RBP30.56■■■□□ 2.48
ITM2C-210ENST00000620962 LRP6O75581 1613 aa30.55■■■□□ 2.48
ITM2C-210ENST00000620962 CLTCL1P53675 1640 aa30.55■■■□□ 2.48
ITM2C-210ENST00000620962 ZNF326Q5BKZ1 582 aaKnown RBP30.54■■■□□ 2.48
ITM2C-210ENST00000620962 NEXMIFQ5QGS0 1516 aa30.52■■■□□ 2.48
ITM2C-210ENST00000620962 BRINP3Q76B58 766 aa30.52■■■□□ 2.48
ITM2C-210ENST00000620962 KIF1BO60333 1816 aa30.51■■■□□ 2.47
ITM2C-210ENST00000620962 METP08581 1390 aa30.51■■■□□ 2.47
ITM2C-210ENST00000620962 NAIPQ13075 1403 aa30.5■■■□□ 2.47
ITM2C-210ENST00000620962 ASXL1Q8IXJ9 1541 aa30.48■■■□□ 2.47
ITM2C-210ENST00000620962 MST1RQ04912 1400 aa30.47■■■□□ 2.47
ITM2C-210ENST00000620962 SETD1AO15047 1707 aaKnown RBP30.47■■■□□ 2.47
ITM2C-210ENST00000620962 NHSL1Q5SYE7 1610 aa30.46■■■□□ 2.47
ITM2C-210ENST00000620962 ADGRL3Q9HAR2 1447 aa30.45■■■□□ 2.46
ITM2C-210ENST00000620962 MEX3CQ5U5Q3 659 aaKnown RBP30.44■■■□□ 2.46
ITM2C-210ENST00000620962 ZNF772Q68DY9 489 aaPredicted RBP30.44■■■□□ 2.46
ITM2C-210ENST00000620962 SETD5Q9C0A6 1442 aa30.43■■■□□ 2.46
ITM2C-210ENST00000620962 NALCNQ8IZF0 1738 aa30.42■■■□□ 2.46
ITM2C-210ENST00000620962 HFM1A2PYH4 1435 aa30.38■■■□□ 2.45
ITM2C-210ENST00000620962 PTCH1Q13635 1447 aa30.35■■■□□ 2.45
ITM2C-210ENST00000620962 VGFO15240 615 aaPredicted RBP30.34■■■□□ 2.45
ITM2C-210ENST00000620962 LRRC59Q96AG4 307 aaKnown RBP30.33■■■□□ 2.45
ITM2C-210ENST00000620962 PRAG1Q86YV5 1406 aa30.32■■■□□ 2.44
ITM2C-210ENST00000620962 RPGRIP1LQ68CZ1 1315 aa30.31■■■□□ 2.44
ITM2C-210ENST00000620962 NUTM2BA6NNL0 878 aaPredicted RBP30.31■■■□□ 2.44
ITM2C-210ENST00000620962 NUTM2EB1AL46 878 aaPredicted RBP30.31■■■□□ 2.44
ITM2C-210ENST00000620962 NUTM2AQ8IVF1 878 aaPredicted RBP30.31■■■□□ 2.44
ITM2C-210ENST00000620962 TRIM52Q96A61 297 aa30.3■■■□□ 2.44
ITM2C-210ENST00000620962 LAMC1P11047 1609 aa30.29■■■□□ 2.44
ITM2C-210ENST00000620962 PPLO60437 1756 aa30.29■■■□□ 2.44
ITM2C-210ENST00000620962 C1orf167Q5SNV9 1468 aa30.28■■■□□ 2.44
ITM2C-210ENST00000620962 CDK12Q9NYV4 1490 aaPredicted RBP30.28■■■□□ 2.44
ITM2C-210ENST00000620962 PNPLA6Q8IY17 1366 aa30.27■■■□□ 2.44
ITM2C-210ENST00000620962 ROBO2Q9HCK4 1378 aa30.27■■■□□ 2.44
ITM2C-210ENST00000620962 RXRBP28702 533 aa30.26■■■□□ 2.43
ITM2C-210ENST00000620962 SLC4A1APQ9BWU0 796 aaKnown RBP30.26■■■□□ 2.43
ITM2C-210ENST00000620962 AFF2P51816 1311 aa30.24■■■□□ 2.43
ITM2C-210ENST00000620962 DDX17Q92841 729 aaKnown RBP30.24■■■□□ 2.43
ITM2C-210ENST00000620962 UPF1Q92900 1129 aaKnown RBP eCLIP30.21■■■□□ 2.432e-15■■■■■ 48.9
ITM2C-210ENST00000620962 SOS2Q07890 1332 aaPredicted RBP30.17■■■□□ 2.42
ITM2C-210ENST00000620962 C8orf37Q96NL8 207 aa30.15■■■□□ 2.42
ITM2C-210ENST00000620962 ORAI2Q96SN7 254 aa30.14■■■□□ 2.42
ITM2C-210ENST00000620962 CDC42BPGQ6DT37 1551 aa30.12■■■□□ 2.41
ITM2C-210ENST00000620962 CCDC144AA2RUR9 1427 aa30.11■■■□□ 2.41
ITM2C-210ENST00000620962 QTRT2Q9H974 415 aaKnown RBP30.1■■■□□ 2.41
ITM2C-210ENST00000620962 IFT172Q9UG01 1749 aa30.1■■■□□ 2.41
ITM2C-210ENST00000620962 RBM6P78332 1123 aaKnown RBP30.09■■■□□ 2.41
ITM2C-210ENST00000620962 COL22A1Q8NFW1 1626 aaPredicted RBP30.08■■■□□ 2.41
ITM2C-210ENST00000620962 SPATA31E1Q6ZUB1 1445 aa30.08■■■□□ 2.41
ITM2C-210ENST00000620962 FOXD1Q16676 465 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms