RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 SCUBE2Q9NQ36 999 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 SERPINA10Q9UK55 444 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 IRF5Q13568 498 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 PPP2R2DQ66LE6 453 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 RIC3Q7Z5B4 369 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 TBC1D2BQ9UPU7 963 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 PCDHB15Q9Y5E8 787 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 RCCD1A6NED2 376 aa6.79□□□□□ -1.32
LRRC39-204ENST00000620882 MOXD2PA6NHM9 499 aa6.79□□□□□ -1.32
LRRC39-204ENST00000620882 NDUFV2P19404 249 aa6.79□□□□□ -1.32
LRRC39-204ENST00000620882 PRSS12P56730 875 aa6.79□□□□□ -1.32
LRRC39-204ENST00000620882 C7P10643 843 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 CD46P15529 392 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
LRRC39-204ENST00000620882 ARSIQ5FYB1 569 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 RTL5Q5HYW3 569 aaPredicted RBP6.78□□□□□ -1.32
LRRC39-204ENST00000620882 RSBN1LQ6PCB5 846 aaPredicted RBP6.78□□□□□ -1.32
LRRC39-204ENST00000620882 AEBP1Q8IUX7 1158 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 BANK1Q8NDB2 785 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 CERKQ8TCT0 537 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 EYA1Q99502 592 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 TRAIPQ9BWF2 469 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 TSKSQ9UJT2 592 aa6.78□□□□□ -1.32
LRRC39-204ENST00000620882 KCTD17Q8N5Z5 321 aa6.77□□□□□ -1.33
LRRC39-204ENST00000620882 GPR37L1O60883 481 aa6.77□□□□□ -1.33
LRRC39-204ENST00000620882 ABL2P42684 1182 aa6.77□□□□□ -1.33
LRRC39-204ENST00000620882 ADAMTS19Q8TE59 1207 aa6.77□□□□□ -1.33
LRRC39-204ENST00000620882 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
LRRC39-204ENST00000620882 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
LRRC39-204ENST00000620882 RBM46Q8TBY0 533 aaKnown RBP6.76□□□□□ -1.33
LRRC39-204ENST00000620882 CABLES1Q8TDN4 633 aa6.76□□□□□ -1.33
LRRC39-204ENST00000620882 GLMNQ92990 594 aa6.76□□□□□ -1.33
LRRC39-204ENST00000620882 SPTLC1O15269 473 aa6.75□□□□□ -1.33
LRRC39-204ENST00000620882 HOXB3P14651 431 aaPredicted RBP6.75□□□□□ -1.33
LRRC39-204ENST00000620882 TMEM259Q4ZIN3 620 aa6.75□□□□□ -1.33
LRRC39-204ENST00000620882 HLA-CQ95604 372 aa6.75□□□□□ -1.33
LRRC39-204ENST00000620882 CARNS1A5YM72 827 aa6.74□□□□□ -1.33
LRRC39-204ENST00000620882 SMAPO00193 183 aa6.74□□□□□ -1.33
LRRC39-204ENST00000620882 LILRB3O75022 631 aa6.74□□□□□ -1.33
LRRC39-204ENST00000620882 AP1G2O75843 785 aa6.74□□□□□ -1.33
LRRC39-204ENST00000620882 NUDT18Q6ZVK8 323 aa6.74□□□□□ -1.33
LRRC39-204ENST00000620882 GJD4Q96KN9 370 aaPredicted RBP6.74□□□□□ -1.33
LRRC39-204ENST00000620882 HMX1Q9NP08 348 aaPredicted RBP6.74□□□□□ -1.33
LRRC39-204ENST00000620882 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.74□□□□□ -1.33
LRRC39-204ENST00000620882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.73□□□□□ -1.33
LRRC39-204ENST00000620882 USP17L8P0C7I0 530 aa6.73□□□□□ -1.33
LRRC39-204ENST00000620882 GUCA2AQ02747 115 aa6.73□□□□□ -1.33
LRRC39-204ENST00000620882 GPR153Q6NV75 609 aa6.73□□□□□ -1.33
LRRC39-204ENST00000620882 CALR3Q96L12 384 aaKnown RBP6.73□□□□□ -1.33
LRRC39-204ENST00000620882 DIXDC1Q155Q3 683 aa6.71□□□□□ -1.33
LRRC39-204ENST00000620882 TMEM134Q9H6X4 195 aa6.71□□□□□ -1.33
LRRC39-204ENST00000620882 LHX6Q9UPM6 363 aa6.71□□□□□ -1.33
LRRC39-204ENST00000620882 NUTM1Q86Y26 1132 aa6.71□□□□□ -1.34
LRRC39-204ENST00000620882 PCDHGC3Q9UN70 934 aa6.71□□□□□ -1.34
LRRC39-204ENST00000620882 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.7□□□□□ -1.34
LRRC39-204ENST00000620882 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
LRRC39-204ENST00000620882 PROX2Q3B8N5 592 aa6.7□□□□□ -1.34
LRRC39-204ENST00000620882 ZNF710Q8N1W2 664 aa6.7□□□□□ -1.34
LRRC39-204ENST00000620882 RFX1P22670 979 aa6.69□□□□□ -1.34
LRRC39-204ENST00000620882 EPS8L1Q8TE68 723 aa6.69□□□□□ -1.34
LRRC39-204ENST00000620882 ZNF428Q96B54 188 aa6.69□□□□□ -1.34
LRRC39-204ENST00000620882 TRIM34Q9BYJ4 488 aa6.69□□□□□ -1.34
LRRC39-204ENST00000620882 PNMA3Q9UL41 463 aa6.69□□□□□ -1.34
LRRC39-204ENST00000620882 DNAJB2P25686 324 aa6.68□□□□□ -1.34
LRRC39-204ENST00000620882 CTDSPL2Q05D32 466 aa6.68□□□□□ -1.34
LRRC39-204ENST00000620882 TATDN2Q93075 761 aa6.68□□□□□ -1.34
LRRC39-204ENST00000620882 BCL2L12Q9HB09 334 aa6.68□□□□□ -1.34
LRRC39-204ENST00000620882 NUTM2BA6NNL0 878 aaPredicted RBP6.68□□□□□ -1.34
LRRC39-204ENST00000620882 NUTM2EB1AL46 878 aaPredicted RBP6.68□□□□□ -1.34
LRRC39-204ENST00000620882 CFAP70Q5T0N1 1121 aa6.68□□□□□ -1.34
LRRC39-204ENST00000620882 NUTM2DQ5VT03 806 aaPredicted RBP6.68□□□□□ -1.34
LRRC39-204ENST00000620882 NUTM2AQ8IVF1 878 aaPredicted RBP6.68□□□□□ -1.34
LRRC39-204ENST00000620882 SULF1Q8IWU6 871 aa6.68□□□□□ -1.34
LRRC39-204ENST00000620882 RGS22Q8NE09 1264 aa6.68□□□□□ -1.34
LRRC39-204ENST00000620882 GZF1Q9H116 711 aaPredicted RBP6.68□□□□□ -1.34
LRRC39-204ENST00000620882 HOXA2O43364 376 aa6.67□□□□□ -1.34
LRRC39-204ENST00000620882 KDM4AO75164 1064 aa6.67□□□□□ -1.34
LRRC39-204ENST00000620882 HDGFL1Q5TGJ6 251 aa6.67□□□□□ -1.34
LRRC39-204ENST00000620882 RDH13Q8NBN7 331 aa6.67□□□□□ -1.34
LRRC39-204ENST00000620882 MTMR7Q9Y216 660 aa6.67□□□□□ -1.34
LRRC39-204ENST00000620882 TRIM6-TRIM34B2RNG4 842 aa6.66□□□□□ -1.34
LRRC39-204ENST00000620882 PPP1R3GB7ZBB8 358 aa6.66□□□□□ -1.34
LRRC39-204ENST00000620882 SLC10A3P09131 477 aa6.66□□□□□ -1.34
LRRC39-204ENST00000620882 SRPK2P78362 688 aaKnown RBP6.66□□□□□ -1.34
LRRC39-204ENST00000620882 VAC14Q08AM6 782 aa6.66□□□□□ -1.34
LRRC39-204ENST00000620882 LRRN4Q8WUT4 740 aa6.66□□□□□ -1.34
LRRC39-204ENST00000620882 SOCS7O14512 581 aa6.65□□□□□ -1.34
LRRC39-204ENST00000620882 ST18O60284 1047 aa6.65□□□□□ -1.34
LRRC39-204ENST00000620882 GJA5P36382 358 aa6.65□□□□□ -1.34
LRRC39-204ENST00000620882 FOXD4L5Q5VV16 416 aaPredicted RBP6.65□□□□□ -1.34
LRRC39-204ENST00000620882 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
LRRC39-204ENST00000620882 UCN2Q96RP3 112 aa6.64□□□□□ -1.35
LRRC39-204ENST00000620882 NBPF26B4DH59 902 aa6.64□□□□□ -1.35
LRRC39-204ENST00000620882 CFAP99D6REC4 459 aa6.64□□□□□ -1.35
LRRC39-204ENST00000620882 FDX1P10109 184 aa6.64□□□□□ -1.35
LRRC39-204ENST00000620882 PPP1R15AO75807 674 aaPredicted RBP6.63□□□□□ -1.35
LRRC39-204ENST00000620882 GCGRP47871 477 aa6.63□□□□□ -1.35
LRRC39-204ENST00000620882 DOK7Q18PE1 504 aa6.63□□□□□ -1.35
LRRC39-204ENST00000620882 PPP4R3BQ5MIZ7 849 aa6.63□□□□□ -1.35
LRRC39-204ENST00000620882 PRPF38BQ5VTL8 546 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms