RNA–Protein interactions for RNA: ENST00000619352.4

HMGN2-210, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-210ENST00000619352 GTF3C3Q9Y5Q9 886 aa10.77□□□□□ -0.69
HMGN2-210ENST00000619352 SLC19A1P41440 591 aa10.76□□□□□ -0.69
HMGN2-210ENST00000619352 PNMA3Q9UL41 463 aa10.76□□□□□ -0.69
HMGN2-210ENST00000619352 EMID1Q96A84 441 aaPredicted RBP10.75□□□□□ -0.69
HMGN2-210ENST00000619352 ZPR1O75312 459 aa10.74□□□□□ -0.69
HMGN2-210ENST00000619352 SPRYD7Q5W111 196 aa10.74□□□□□ -0.69
HMGN2-210ENST00000619352 ZNF598Q86UK7 904 aaKnown RBP10.74□□□□□ -0.69
HMGN2-210ENST00000619352 RNF40O75150 1001 aa10.73□□□□□ -0.69
HMGN2-210ENST00000619352 PDIA6Q15084 440 aa10.73□□□□□ -0.69
HMGN2-210ENST00000619352 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
HMGN2-210ENST00000619352 RNF223E7ERA6 249 aa10.71□□□□□ -0.69
HMGN2-210ENST00000619352 COPS2P61201 443 aa10.71□□□□□ -0.69
HMGN2-210ENST00000619352 SPDYE16A6NNV3 312 aaPredicted RBP10.69□□□□□ -0.7
HMGN2-210ENST00000619352 NUDT18Q6ZVK8 323 aa10.69□□□□□ -0.7
HMGN2-210ENST00000619352 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
HMGN2-210ENST00000619352 GDF9O60383 454 aa10.67□□□□□ -0.7
HMGN2-210ENST00000619352 ANKLE1Q8NAG6 615 aa10.67□□□□□ -0.7
HMGN2-210ENST00000619352 PRR14Q9BWN1 585 aa10.66□□□□□ -0.7
HMGN2-210ENST00000619352 STK17AQ9UEE5 414 aa10.66□□□□□ -0.7
HMGN2-210ENST00000619352 AAASQ9NRG9 546 aa10.65□□□□□ -0.7
HMGN2-210ENST00000619352 FAM187AA6NFU0 413 aa10.64□□□□□ -0.71
HMGN2-210ENST00000619352 PRIM1P49642 420 aaKnown RBP10.64□□□□□ -0.71
HMGN2-210ENST00000619352 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
HMGN2-210ENST00000619352 TTC13Q8NBP0 860 aa10.64□□□□□ -0.71
HMGN2-210ENST00000619352 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
HMGN2-210ENST00000619352 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
HMGN2-210ENST00000619352 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
HMGN2-210ENST00000619352 CDHR5Q9HBB8 845 aa10.61□□□□□ -0.71
HMGN2-210ENST00000619352 PCDHB3Q9Y5E6 796 aa10.61□□□□□ -0.71
HMGN2-210ENST00000619352 WIPF1O43516 503 aa10.6□□□□□ -0.71
HMGN2-210ENST00000619352 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
HMGN2-210ENST00000619352 CRIPAKQ8N1N5 446 aa10.6□□□□□ -0.71
HMGN2-210ENST00000619352 WFS1O76024 890 aa10.59□□□□□ -0.71
HMGN2-210ENST00000619352 GRXCR2A6NFK2 248 aa10.58□□□□□ -0.72
HMGN2-210ENST00000619352 ST8SIA5O15466 376 aa10.58□□□□□ -0.72
HMGN2-210ENST00000619352 LMOD2Q6P5Q4 547 aa10.57□□□□□ -0.72
HMGN2-210ENST00000619352 BLOC1S3Q6QNY0 202 aa10.56□□□□□ -0.72
HMGN2-210ENST00000619352 TNFRSF10AO00220 468 aa10.55□□□□□ -0.72
HMGN2-210ENST00000619352 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
HMGN2-210ENST00000619352 HOMEZQ8IX15 550 aa10.55□□□□□ -0.72
HMGN2-210ENST00000619352 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
HMGN2-210ENST00000619352 OSBPP22059 807 aa10.54□□□□□ -0.72
HMGN2-210ENST00000619352 EYA1Q99502 592 aa10.54□□□□□ -0.72
HMGN2-210ENST00000619352 AVPP01185 164 aa10.53□□□□□ -0.72
HMGN2-210ENST00000619352 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
HMGN2-210ENST00000619352 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
HMGN2-210ENST00000619352 S1PR4O95977 384 aa10.52□□□□□ -0.73
HMGN2-210ENST00000619352 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
HMGN2-210ENST00000619352 TLL1O43897 1013 aa10.51□□□□□ -0.73
HMGN2-210ENST00000619352 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
HMGN2-210ENST00000619352 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
HMGN2-210ENST00000619352 LOC100996750A0A140TA64 210 aa10.49□□□□□ -0.73
HMGN2-210ENST00000619352 E2F4Q16254 413 aa10.49□□□□□ -0.73
HMGN2-210ENST00000619352 KRTAP4-6Q9BYQ5 205 aa10.49□□□□□ -0.73
HMGN2-210ENST00000619352 PKD2L1Q9P0L9 805 aa10.49□□□□□ -0.73
HMGN2-210ENST00000619352 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
HMGN2-210ENST00000619352 ADH1BP00325 375 aa10.47□□□□□ -0.73
HMGN2-210ENST00000619352 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
HMGN2-210ENST00000619352 DACH1Q9UI36 760 aa10.47□□□□□ -0.73
HMGN2-210ENST00000619352 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
HMGN2-210ENST00000619352 PLA2G2CQ5R387 149 aa10.46□□□□□ -0.73
HMGN2-210ENST00000619352 GMPR2Q9P2T1 348 aaKnown RBP10.46□□□□□ -0.73
HMGN2-210ENST00000619352 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
HMGN2-210ENST00000619352 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
HMGN2-210ENST00000619352 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
HMGN2-210ENST00000619352 TOR4AQ9NXH8 423 aa10.44□□□□□ -0.74
HMGN2-210ENST00000619352 AXIN1O15169 862 aa10.43□□□□□ -0.74
HMGN2-210ENST00000619352 SLC6A16Q9GZN6 736 aa10.42□□□□□ -0.74
HMGN2-210ENST00000619352 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
HMGN2-210ENST00000619352 NR1I2O75469 434 aa10.4□□□□□ -0.74
HMGN2-210ENST00000619352 DNAJB2P25686 324 aa10.4□□□□□ -0.74
HMGN2-210ENST00000619352 RPIAP49247 311 aa10.4□□□□□ -0.74
HMGN2-210ENST00000619352 TMEM134Q9H6X4 195 aa10.39□□□□□ -0.75
HMGN2-210ENST00000619352 FOXC1Q12948 553 aa10.38□□□□□ -0.75
HMGN2-210ENST00000619352 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
HMGN2-210ENST00000619352 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
HMGN2-210ENST00000619352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.755e-39■□□□□ 10.8
HMGN2-210ENST00000619352 TERTO14746 1132 aaKnown RBP10.35□□□□□ -0.75
HMGN2-210ENST00000619352 CFHP08603 1231 aa10.34□□□□□ -0.75
HMGN2-210ENST00000619352 CYP4X1Q8N118 509 aa10.34□□□□□ -0.75
HMGN2-210ENST00000619352 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
HMGN2-210ENST00000619352 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
HMGN2-210ENST00000619352 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
HMGN2-210ENST00000619352 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
HMGN2-210ENST00000619352 SLC10A3P09131 477 aa10.29□□□□□ -0.76
HMGN2-210ENST00000619352 SPSB2Q99619 263 aa10.29□□□□□ -0.76
HMGN2-210ENST00000619352 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
HMGN2-210ENST00000619352 ATP13A2Q9NQ11 1180 aa10.28□□□□□ -0.76
HMGN2-210ENST00000619352 ADGRG1Q9Y653 693 aa10.28□□□□□ -0.76
HMGN2-210ENST00000619352 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
HMGN2-210ENST00000619352 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
HMGN2-210ENST00000619352 SNRPBP14678 240 aaKnown RBP10.26□□□□□ -0.77
HMGN2-210ENST00000619352 PTGDRQ13258 359 aa10.25□□□□□ -0.77
HMGN2-210ENST00000619352 ARHGEF1Q92888 912 aaKnown RBP10.25□□□□□ -0.77
HMGN2-210ENST00000619352 TTC24A2A3L6 582 aaPredicted RBP10.22□□□□□ -0.77
HMGN2-210ENST00000619352 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
HMGN2-210ENST00000619352 FCF1Q9Y324 198 aaKnown RBP10.22□□□□□ -0.77
HMGN2-210ENST00000619352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.21□□□□□ -0.77
HMGN2-210ENST00000619352 SMPD1P17405 629 aa10.21□□□□□ -0.77
HMGN2-210ENST00000619352 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms