RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 EID1Q9Y6B2 187 aa33.21■■■□□ 2.91
TRAF4-217ENST00000618771 NAIPQ13075 1403 aa33.13■■■□□ 2.89
TRAF4-217ENST00000618771 PHF23Q9BUL5 403 aaPredicted RBP33.13■■■□□ 2.89
TRAF4-217ENST00000618771 TMEM131LA2VDJ0 1609 aa33.13■■■□□ 2.89
TRAF4-217ENST00000618771 SPHKAPQ2M3C7 1700 aa33.08■■■□□ 2.89
TRAF4-217ENST00000618771 HFM1A2PYH4 1435 aa33.06■■■□□ 2.88
TRAF4-217ENST00000618771 XIRP1Q702N8 1843 aaKnown RBP33.04■■■□□ 2.88
TRAF4-217ENST00000618771 ZFYVE9O95405 1425 aa33.02■■■□□ 2.88
TRAF4-217ENST00000618771 CHGAP10645 457 aaKnown RBP33■■■□□ 2.87
TRAF4-217ENST00000618771 RIMS2Q9UQ26 1411 aa33■■■□□ 2.87
TRAF4-217ENST00000618771 HDGFP51858 240 aaKnown RBP32.95■■■□□ 2.87
TRAF4-217ENST00000618771 SLC26A8Q96RN1 970 aa32.94■■■□□ 2.86
TRAF4-217ENST00000618771 PPP1R15AO75807 674 aaPredicted RBP32.93■■■□□ 2.86
TRAF4-217ENST00000618771 PLEKHG1Q9ULL1 1385 aa32.93■■■□□ 2.86
TRAF4-217ENST00000618771 BCANQ96GW7 911 aa32.92■■■□□ 2.86
TRAF4-217ENST00000618771 KCNA6P17658 529 aa32.91■■■□□ 2.86
TRAF4-217ENST00000618771 TMEM94Q12767 1356 aa32.91■■■□□ 2.86
TRAF4-217ENST00000618771 TRIM52Q96A61 297 aa32.9■■■□□ 2.86
TRAF4-217ENST00000618771 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.89■■■□□ 2.86
TRAF4-217ENST00000618771 TRPM2O94759 1503 aa32.88■■■□□ 2.85
TRAF4-217ENST00000618771 PROSER2Q86WR7 435 aaPredicted RBP32.87■■■□□ 2.85
TRAF4-217ENST00000618771 CLTCL1P53675 1640 aa32.87■■■□□ 2.85
TRAF4-217ENST00000618771 NWD1Q149M9 1564 aa32.87■■■□□ 2.85
TRAF4-217ENST00000618771 FAM135BQ49AJ0 1406 aa32.86■■■□□ 2.85
TRAF4-217ENST00000618771 RBM33Q96EV2 1170 aaKnown RBP32.86■■■□□ 2.85
TRAF4-217ENST00000618771 CHD2O14647 1828 aaKnown RBP32.84■■■□□ 2.85
TRAF4-217ENST00000618771 KIF1BO60333 1816 aa32.84■■■□□ 2.85
TRAF4-217ENST00000618771 NUTM2DQ5VT03 806 aaPredicted RBP32.83■■■□□ 2.85
TRAF4-217ENST00000618771 RGS17Q9UGC6 210 aaPredicted RBP32.82■■■□□ 2.84
TRAF4-217ENST00000618771 NKTRP30414 1462 aaKnown RBP32.81■■■□□ 2.84
TRAF4-217ENST00000618771 DIP2AQ14689 1571 aa32.79■■■□□ 2.84
TRAF4-217ENST00000618771 SLC4A1APQ9BWU0 796 aaKnown RBP32.79■■■□□ 2.84
TRAF4-217ENST00000618771 ROBO1Q9Y6N7 1651 aa32.77■■■□□ 2.84
TRAF4-217ENST00000618771 ADAMTS13Q76LX8 1427 aa32.77■■■□□ 2.84
TRAF4-217ENST00000618771 TBX22Q9Y458 520 aa32.75■■■□□ 2.83
TRAF4-217ENST00000618771 ZNF326Q5BKZ1 582 aaKnown RBP32.74■■■□□ 2.83
TRAF4-217ENST00000618771 MSH6P52701 1360 aa32.7■■■□□ 2.83
TRAF4-217ENST00000618771 NRXN3Q9Y4C0 1643 aa32.7■■■□□ 2.83
TRAF4-217ENST00000618771 NEXMIFQ5QGS0 1516 aa32.7■■■□□ 2.83
TRAF4-217ENST00000618771 SETBP1Q9Y6X0 1596 aa32.68■■■□□ 2.82
TRAF4-217ENST00000618771 PIK3R4Q99570 1358 aa32.67■■■□□ 2.82
TRAF4-217ENST00000618771 SLAIN2Q9P270 581 aa32.65■■■□□ 2.82
TRAF4-217ENST00000618771 POTEAQ6S8J7 498 aa32.63■■■□□ 2.81
TRAF4-217ENST00000618771 SETD5Q9C0A6 1442 aa32.62■■■□□ 2.81
TRAF4-217ENST00000618771 FOXD1Q16676 465 aa32.61■■■□□ 2.81
TRAF4-217ENST00000618771 MPHOSPH9Q99550 1183 aa32.6■■■□□ 2.81
TRAF4-217ENST00000618771 ACIN1Q9UKV3 1341 aaKnown RBP32.58■■■□□ 2.81
TRAF4-217ENST00000618771 PHLPP1O60346 1717 aa32.58■■■□□ 2.81
TRAF4-217ENST00000618771 PPLO60437 1756 aa32.58■■■□□ 2.81
TRAF4-217ENST00000618771 XRN1Q8IZH2 1706 aaKnown RBP32.57■■■□□ 2.8
TRAF4-217ENST00000618771 PTPRUQ92729 1446 aa32.56■■■□□ 2.8
TRAF4-217ENST00000618771 NCOA3Q9Y6Q9 1424 aa32.55■■■□□ 2.8
TRAF4-217ENST00000618771 CCDC144AA2RUR9 1427 aa32.53■■■□□ 2.8
TRAF4-217ENST00000618771 C14orf37Q86TY3 774 aa32.53■■■□□ 2.8
TRAF4-217ENST00000618771 AMOTL2Q9Y2J4 779 aa32.53■■■□□ 2.8
TRAF4-217ENST00000618771 JCADQ9P266 1359 aa32.52■■■□□ 2.8
TRAF4-217ENST00000618771 RAB3GAP2Q9H2M9 1393 aa32.51■■■□□ 2.79
TRAF4-217ENST00000618771 RPGRIP1LQ68CZ1 1315 aa32.51■■■□□ 2.79
TRAF4-217ENST00000618771 METP08581 1390 aa32.5■■■□□ 2.79
TRAF4-217ENST00000618771 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.49■■■□□ 2.79
TRAF4-217ENST00000618771 VGFO15240 615 aaPredicted RBP32.49■■■□□ 2.79
TRAF4-217ENST00000618771 SETD1AO15047 1707 aaKnown RBP32.48■■■□□ 2.79
TRAF4-217ENST00000618771 COL16A1Q07092 1604 aaPredicted RBP32.44■■■□□ 2.78
TRAF4-217ENST00000618771 IFT172Q9UG01 1749 aa32.44■■■□□ 2.78
TRAF4-217ENST00000618771 CADPS2Q86UW7 1296 aa32.43■■■□□ 2.78
TRAF4-217ENST00000618771 C19orf44Q9H6X5 657 aa32.43■■■□□ 2.78
TRAF4-217ENST00000618771 SPATA31E1Q6ZUB1 1445 aa32.43■■■□□ 2.78
TRAF4-217ENST00000618771 ATF3P18847 181 aa32.42■■■□□ 2.78
TRAF4-217ENST00000618771 RGL3Q3MIN7 710 aa32.37■■■□□ 2.77
TRAF4-217ENST00000618771 LRP6O75581 1613 aa32.34■■■□□ 2.77
TRAF4-217ENST00000618771 SPATA31A6Q5VVP1 1343 aa32.34■■■□□ 2.77
TRAF4-217ENST00000618771 MEX3CQ5U5Q3 659 aaKnown RBP32.34■■■□□ 2.77
TRAF4-217ENST00000618771 DCCP43146 1447 aa32.34■■■□□ 2.77
TRAF4-217ENST00000618771 AHDC1Q5TGY3 1603 aaPredicted RBP32.33■■■□□ 2.77
TRAF4-217ENST00000618771 NALCNQ8IZF0 1738 aa32.33■■■□□ 2.77
TRAF4-217ENST00000618771 ANKRD30BQ9BXX2 1392 aa32.32■■■□□ 2.77
TRAF4-217ENST00000618771 ADGRF5Q8IZF2 1346 aa32.3■■■□□ 2.76
TRAF4-217ENST00000618771 PTCH1Q13635 1447 aa32.3■■■□□ 2.76
TRAF4-217ENST00000618771 ADGRL3Q9HAR2 1447 aa32.29■■■□□ 2.76
TRAF4-217ENST00000618771 BRINP3Q76B58 766 aa32.29■■■□□ 2.76
TRAF4-217ENST00000618771 SHPRHQ149N8 1683 aa32.27■■■□□ 2.76
TRAF4-217ENST00000618771 PRAG1Q86YV5 1406 aa32.27■■■□□ 2.76
TRAF4-217ENST00000618771 HRCP23327 699 aa32.26■■■□□ 2.75
TRAF4-217ENST00000618771 ZNF772Q68DY9 489 aaPredicted RBP32.25■■■□□ 2.75
TRAF4-217ENST00000618771 ROBO2Q9HCK4 1378 aa32.24■■■□□ 2.75
TRAF4-217ENST00000618771 PIK3C2GO75747 1445 aa32.23■■■□□ 2.75
TRAF4-217ENST00000618771 MST1RQ04912 1400 aa32.21■■■□□ 2.75
TRAF4-217ENST00000618771 NUTM2BA6NNL0 878 aaPredicted RBP32.2■■■□□ 2.75
TRAF4-217ENST00000618771 NUTM2EB1AL46 878 aaPredicted RBP32.2■■■□□ 2.75
TRAF4-217ENST00000618771 NUTM2AQ8IVF1 878 aaPredicted RBP32.2■■■□□ 2.75
TRAF4-217ENST00000618771 ASXL1Q8IXJ9 1541 aa32.18■■■□□ 2.74
TRAF4-217ENST00000618771 MYOM2P54296 1465 aa32.17■■■□□ 2.74
TRAF4-217ENST00000618771 KNDC1Q76NI1 1749 aa32.17■■■□□ 2.74
TRAF4-217ENST00000618771 NRXN1Q9ULB1 1477 aa32.15■■■□□ 2.74
TRAF4-217ENST00000618771 LAMC1P11047 1609 aa32.15■■■□□ 2.74
TRAF4-217ENST00000618771 NHSL1Q5SYE7 1610 aa32.13■■■□□ 2.73
TRAF4-217ENST00000618771 TECPR2O15040 1411 aa32.12■■■□□ 2.73
TRAF4-217ENST00000618771 LRPPRCP42704 1394 aaKnown RBP32.11■■■□□ 2.73
TRAF4-217ENST00000618771 RXRBP28702 533 aa32.1■■■□□ 2.73
TRAF4-217ENST00000618771 TMEM132EQ6IEE7 984 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms