RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 LRRCC1Q9C099 1032 aa18.14■□□□□ 0.49
COL5A1-208ENST00000618395 TSPY26PQ9H489 355 aa18.13■□□□□ 0.49
COL5A1-208ENST00000618395 CENPJQ9HC77 1338 aaPredicted RBP18.12■□□□□ 0.49
COL5A1-208ENST00000618395 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
COL5A1-208ENST00000618395 MBD3O95983 291 aa18.12■□□□□ 0.49
COL5A1-208ENST00000618395 ENOX2Q16206 610 aaKnown RBP18.12■□□□□ 0.49
COL5A1-208ENST00000618395 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
COL5A1-208ENST00000618395 SHTN1A0MZ66 631 aa18.11■□□□□ 0.49
COL5A1-208ENST00000618395 ODF2Q5BJF6 829 aa18.11■□□□□ 0.49
COL5A1-208ENST00000618395 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
COL5A1-208ENST00000618395 CCDC47Q96A33 483 aaKnown RBP18.11■□□□□ 0.49
COL5A1-208ENST00000618395 RABEP1Q15276 862 aa18.1■□□□□ 0.49
COL5A1-208ENST00000618395 CT47A1Q5JQC4 288 aaPredicted RBP18.1■□□□□ 0.49
COL5A1-208ENST00000618395 GRPEL1Q9HAV7 217 aa18.1■□□□□ 0.49
COL5A1-208ENST00000618395 HDAC5Q9UQL6 1122 aa18.1■□□□□ 0.49
COL5A1-208ENST00000618395 TTLL5Q6EMB2 1281 aa18.09■□□□□ 0.49
COL5A1-208ENST00000618395 PDILTQ8N807 584 aa18.09■□□□□ 0.49
COL5A1-208ENST00000618395 SPATA24Q86W54 205 aa18.09■□□□□ 0.49
COL5A1-208ENST00000618395 NF2P35240 595 aa18.09■□□□□ 0.49
COL5A1-208ENST00000618395 DHX37Q8IY37 1157 aaKnown RBP18.09■□□□□ 0.49
COL5A1-208ENST00000618395 RTF1Q92541 710 aaKnown RBP18.09■□□□□ 0.49
COL5A1-208ENST00000618395 HSP90AB2PQ58FF8 381 aa18.09■□□□□ 0.49
COL5A1-208ENST00000618395 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
COL5A1-208ENST00000618395 OLFM4Q6UX06 510 aa18.09■□□□□ 0.49
COL5A1-208ENST00000618395 CLGNO14967 610 aa18.08■□□□□ 0.48
COL5A1-208ENST00000618395 SEPT7Q16181 437 aaKnown RBP18.08■□□□□ 0.48
COL5A1-208ENST00000618395 CCDC73Q6ZRK6 1079 aa18.08■□□□□ 0.48
COL5A1-208ENST00000618395 SMARCE1Q969G3 411 aa18.07■□□□□ 0.48
COL5A1-208ENST00000618395 MARCH6O60337 910 aa18.07■□□□□ 0.48
COL5A1-208ENST00000618395 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
COL5A1-208ENST00000618395 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
COL5A1-208ENST00000618395 MNAT1P51948 309 aa18.06■□□□□ 0.48
COL5A1-208ENST00000618395 IQCEQ6IPM2 695 aa18.06■□□□□ 0.48
COL5A1-208ENST00000618395 TDO2P48775 406 aa18.05■□□□□ 0.48
COL5A1-208ENST00000618395 CCDC102AQ96A19 550 aa18.05■□□□□ 0.48
COL5A1-208ENST00000618395 ANKRD18AQ8IVF6 992 aa18.05■□□□□ 0.48
COL5A1-208ENST00000618395 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
COL5A1-208ENST00000618395 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
COL5A1-208ENST00000618395 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
COL5A1-208ENST00000618395 EZRP15311 586 aaKnown RBP18.05■□□□□ 0.48
COL5A1-208ENST00000618395 TMCO3Q6UWJ1 677 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 SLC26A8Q96RN1 970 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 STK31Q9BXU1 1019 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 GOLGA6L10A0A0M3HER8 536 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 MICALCLQ6ZW33 695 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 ZSCAN30Q86W11 494 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 SPC24Q8NBT2 197 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 CTR9Q6PD62 1173 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 CCAR1Q8IX12 1150 aaKnown RBP18.04■□□□□ 0.48
COL5A1-208ENST00000618395 GOLGA3Q08378 1498 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 TRIM29Q14134 588 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 LUZP1Q86V48 1076 aa18.04■□□□□ 0.48
COL5A1-208ENST00000618395 FRAT2O75474 233 aaPredicted RBP18.03■□□□□ 0.48
COL5A1-208ENST00000618395 FBXW7Q969H0 707 aa18.03■□□□□ 0.48
COL5A1-208ENST00000618395 ZCCHC6Q5VYS8 1495 aaKnown RBP18.03■□□□□ 0.48
COL5A1-208ENST00000618395 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
COL5A1-208ENST00000618395 CPSF2Q9P2I0 782 aaKnown RBP18.03■□□□□ 0.48
COL5A1-208ENST00000618395 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
COL5A1-208ENST00000618395 TMCO5BA8MYB1 307 aa18.02■□□□□ 0.48
COL5A1-208ENST00000618395 RILPL2Q969X0 211 aa18.02■□□□□ 0.48
COL5A1-208ENST00000618395 CPLX2Q6PUV4 134 aaKnown RBP18.02■□□□□ 0.47
COL5A1-208ENST00000618395 PAIP2Q9BPZ3 127 aaKnown RBP18.02■□□□□ 0.47
COL5A1-208ENST00000618395 SMC2O95347 1197 aa18.02■□□□□ 0.47
COL5A1-208ENST00000618395 KIAA1328Q86T90 577 aa18.01■□□□□ 0.47
COL5A1-208ENST00000618395 SMC3Q9UQE7 1217 aa18.01■□□□□ 0.47
COL5A1-208ENST00000618395 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
COL5A1-208ENST00000618395 C22orf23Q9BZE7 217 aa18.01■□□□□ 0.47
COL5A1-208ENST00000618395 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
COL5A1-208ENST00000618395 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
COL5A1-208ENST00000618395 ZKSCAN1P17029 563 aaPredicted RBP18■□□□□ 0.47
COL5A1-208ENST00000618395 EPS15P42566 896 aa18■□□□□ 0.47
COL5A1-208ENST00000618395 WWC1Q8IX03 1113 aa18■□□□□ 0.47
COL5A1-208ENST00000618395 CLUAP1Q96AJ1 413 aa18■□□□□ 0.47
COL5A1-208ENST00000618395 TRERF1Q96PN7 1200 aa17.99■□□□□ 0.47
COL5A1-208ENST00000618395 POGKQ9P215 609 aa17.99■□□□□ 0.47
COL5A1-208ENST00000618395 SETSIPP0DME0 302 aa17.99■□□□□ 0.47
COL5A1-208ENST00000618395 DYNC1I1O14576 645 aa17.99■□□□□ 0.47
COL5A1-208ENST00000618395 VPS37CA5D8V6 355 aaPredicted RBP17.98■□□□□ 0.47
COL5A1-208ENST00000618395 OFD1O75665 1012 aa17.98■□□□□ 0.47
COL5A1-208ENST00000618395 FAM193AP78312 1265 aa17.98■□□□□ 0.47
COL5A1-208ENST00000618395 VPS53Q5VIR6 699 aa17.98■□□□□ 0.47
COL5A1-208ENST00000618395 PAXIP1Q6ZW49 1069 aaPredicted RBP17.98■□□□□ 0.47
COL5A1-208ENST00000618395 UBXN4Q92575 508 aa17.98■□□□□ 0.47
COL5A1-208ENST00000618395 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
COL5A1-208ENST00000618395 RUFY2Q8WXA3 655 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 GBP3Q9H0R5 595 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 PLCD3Q8N3E9 789 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.97■□□□□ 0.47
COL5A1-208ENST00000618395 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
COL5A1-208ENST00000618395 CRACR2AQ9BSW2 395 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 LMOD3Q0VAK6 560 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 MAP9Q49MG5 647 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 TAX1BP1Q86VP1 789 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 PPP4R3BQ5MIZ7 849 aa17.97■□□□□ 0.47
COL5A1-208ENST00000618395 GBP2P32456 591 aaPredicted RBP17.96■□□□□ 0.47
COL5A1-208ENST00000618395 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
COL5A1-208ENST00000618395 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
COL5A1-208ENST00000618395 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
COL5A1-208ENST00000618395 CCDC91Q7Z6B0 441 aa17.96■□□□□ 0.47
COL5A1-208ENST00000618395 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms