RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 FOXD4L4Q8WXT5 416 aaPredicted RBP20.27■□□□□ 0.84
RECQL4-209ENST00000617875 NUP153P49790 1475 aaKnown RBP20.27■□□□□ 0.84
RECQL4-209ENST00000617875 LNPKQ9C0E8 428 aa20.27■□□□□ 0.84
RECQL4-209ENST00000617875 ERBINQ96RT1 1412 aa20.27■□□□□ 0.83
RECQL4-209ENST00000617875 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
RECQL4-209ENST00000617875 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
RECQL4-209ENST00000617875 NOL8Q76FK4 1167 aaKnown RBP20.25■□□□□ 0.83
RECQL4-209ENST00000617875 HSCBQ8IWL3 235 aa20.25■□□□□ 0.83
RECQL4-209ENST00000617875 DUSP27Q5VZP5 1158 aa20.24■□□□□ 0.83
RECQL4-209ENST00000617875 C1orf115Q9H7X2 142 aa20.24■□□□□ 0.83
RECQL4-209ENST00000617875 PLEKHH2Q8IVE3 1493 aa20.22■□□□□ 0.83
RECQL4-209ENST00000617875 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
RECQL4-209ENST00000617875 ADGRF5Q8IZF2 1346 aa20.22■□□□□ 0.83
RECQL4-209ENST00000617875 IGHDP01880 384 aa20.22■□□□□ 0.83
RECQL4-209ENST00000617875 FOXD4L6Q3SYB3 417 aaPredicted RBP20.22■□□□□ 0.83
RECQL4-209ENST00000617875 FOXD4L3Q6VB84 417 aaPredicted RBP20.22■□□□□ 0.83
RECQL4-209ENST00000617875 RIPK4P57078 832 aa20.21■□□□□ 0.83
RECQL4-209ENST00000617875 GLIPR1L2Q4G1C9 344 aa20.21■□□□□ 0.83
RECQL4-209ENST00000617875 PNNQ9H307 717 aaKnown RBP20.21■□□□□ 0.83
RECQL4-209ENST00000617875 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
RECQL4-209ENST00000617875 SCAPERQ9BY12 1400 aa20.21■□□□□ 0.83
RECQL4-209ENST00000617875 EIF3AQ14152 1382 aaKnown RBP20.21■□□□□ 0.83
RECQL4-209ENST00000617875 PDZRN3Q9UPQ7 1066 aa20.21■□□□□ 0.83
RECQL4-209ENST00000617875 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
RECQL4-209ENST00000617875 PER1O15534 1290 aaPredicted RBP20.2■□□□□ 0.82
RECQL4-209ENST00000617875 SLFN5Q08AF3 891 aa20.2■□□□□ 0.82
RECQL4-209ENST00000617875 TESK2Q96S53 571 aa20.2■□□□□ 0.82
RECQL4-209ENST00000617875 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
RECQL4-209ENST00000617875 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
RECQL4-209ENST00000617875 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
RECQL4-209ENST00000617875 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
RECQL4-209ENST00000617875 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
RECQL4-209ENST00000617875 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
RECQL4-209ENST00000617875 THUMPD2Q9BTF0 503 aaKnown RBP20.19■□□□□ 0.82
RECQL4-209ENST00000617875 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
RECQL4-209ENST00000617875 GOLGA6L3A6NEY3 463 aa20.18■□□□□ 0.82
RECQL4-209ENST00000617875 NECTIN2Q92692 538 aa20.18■□□□□ 0.82
RECQL4-209ENST00000617875 PZPP20742 1482 aa20.18■□□□□ 0.82
RECQL4-209ENST00000617875 RAPGEF3O95398 923 aa20.18■□□□□ 0.82
RECQL4-209ENST00000617875 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
RECQL4-209ENST00000617875 TAOK2Q9UL54 1235 aa20.18■□□□□ 0.82
RECQL4-209ENST00000617875 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
RECQL4-209ENST00000617875 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
RECQL4-209ENST00000617875 WWC1Q8IX03 1113 aa20.17■□□□□ 0.82
RECQL4-209ENST00000617875 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
RECQL4-209ENST00000617875 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
RECQL4-209ENST00000617875 HDGFL2Q7Z4V5 671 aaPredicted RBP20.16■□□□□ 0.82
RECQL4-209ENST00000617875 L1TD1Q5T7N2 865 aaKnown RBP20.15■□□□□ 0.82
RECQL4-209ENST00000617875 TEX14Q8IWB6 1497 aa20.14■□□□□ 0.82
RECQL4-209ENST00000617875 PLEKHH1Q9ULM0 1364 aa20.14■□□□□ 0.81
RECQL4-209ENST00000617875 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
RECQL4-209ENST00000617875 CTTNBP2Q8WZ74 1663 aa20.14■□□□□ 0.81
RECQL4-209ENST00000617875 PLCB2Q00722 1185 aa20.13■□□□□ 0.81
RECQL4-209ENST00000617875 LTV1Q96GA3 475 aaPredicted RBP20.13■□□□□ 0.81
RECQL4-209ENST00000617875 SEC24BO95487 1268 aa20.12■□□□□ 0.81
RECQL4-209ENST00000617875 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
RECQL4-209ENST00000617875 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
RECQL4-209ENST00000617875 ATP10BO94823 1461 aa20.1■□□□□ 0.81
RECQL4-209ENST00000617875 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
RECQL4-209ENST00000617875 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
RECQL4-209ENST00000617875 DENND4BO75064 1496 aaPredicted RBP20.09■□□□□ 0.81
RECQL4-209ENST00000617875 TERF2IPQ9NYB0 399 aa20.09■□□□□ 0.81
RECQL4-209ENST00000617875 EVC2Q86UK5 1308 aa20.09■□□□□ 0.81
RECQL4-209ENST00000617875 TCOF1Q13428 1488 aaKnown RBP20.08■□□□□ 0.81
RECQL4-209ENST00000617875 NOB1Q9ULX3 412 aaKnown RBP20.07■□□□□ 0.8
RECQL4-209ENST00000617875 GOLGA6L22H0YM25 854 aa20.06■□□□□ 0.8
RECQL4-209ENST00000617875 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
RECQL4-209ENST00000617875 C22orf23Q9BZE7 217 aa20.06■□□□□ 0.8
RECQL4-209ENST00000617875 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
RECQL4-209ENST00000617875 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
RECQL4-209ENST00000617875 PRAM1Q96QH2 718 aa20.06■□□□□ 0.8
RECQL4-209ENST00000617875 RLBP1P12271 317 aa20.05■□□□□ 0.8
RECQL4-209ENST00000617875 PCDHB15Q9Y5E8 787 aa20.05■□□□□ 0.8
RECQL4-209ENST00000617875 WDR62O43379 1518 aa20.04■□□□□ 0.8
RECQL4-209ENST00000617875 VGFO15240 615 aaPredicted RBP20.04■□□□□ 0.8
RECQL4-209ENST00000617875 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
RECQL4-209ENST00000617875 PRKAR2BP31323 418 aa20.04■□□□□ 0.8
RECQL4-209ENST00000617875 CABP1Q9NZU7 370 aa20.03■□□□□ 0.8
RECQL4-209ENST00000617875 PARD3Q8TEW0 1356 aa20.03■□□□□ 0.8
RECQL4-209ENST00000617875 DISP1Q96F81 1524 aa20.02■□□□□ 0.8
RECQL4-209ENST00000617875 RARSP54136 660 aaKnown RBP20.02■□□□□ 0.8
RECQL4-209ENST00000617875 DCTN1Q14203 1278 aa20.02■□□□□ 0.79
RECQL4-209ENST00000617875 NUTM2GQ5VZR2 741 aa20.02■□□□□ 0.79
RECQL4-209ENST00000617875 NSD3Q9BZ95 1437 aa20.02■□□□□ 0.79
RECQL4-209ENST00000617875 C8orf34Q49A92 452 aa20.01■□□□□ 0.79
RECQL4-209ENST00000617875 PRAG1Q86YV5 1406 aa20■□□□□ 0.79
RECQL4-209ENST00000617875 PTMAP06454 111 aaKnown RBP20■□□□□ 0.79
RECQL4-209ENST00000617875 RSPH6AQ9H0K4 717 aa19.99■□□□□ 0.79
RECQL4-209ENST00000617875 DNTTIP2Q5QJE6 756 aaKnown RBP19.99■□□□□ 0.79
RECQL4-209ENST00000617875 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
RECQL4-209ENST00000617875 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
RECQL4-209ENST00000617875 RALGAPBQ86X10 1494 aa19.98■□□□□ 0.79
RECQL4-209ENST00000617875 RAPGEF6Q8TEU7 1601 aa19.98■□□□□ 0.79
RECQL4-209ENST00000617875 PDE3AQ14432 1141 aa19.98■□□□□ 0.79
RECQL4-209ENST00000617875 RRS1Q15050 365 aaKnown RBP19.98■□□□□ 0.79
RECQL4-209ENST00000617875 TMEM57Q8N5G2 664 aa19.98■□□□□ 0.79
RECQL4-209ENST00000617875 TRIM6-TRIM34B2RNG4 842 aa19.97■□□□□ 0.79
RECQL4-209ENST00000617875 DDX19BQ9UMR2 479 aa19.97■□□□□ 0.79
RECQL4-209ENST00000617875 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
RECQL4-209ENST00000617875 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms