RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-208ENST00000614402 KCNA6P17658 529 aa31.34■■■□□ 2.61
PMPCA-208ENST00000614402 SLC26A8Q96RN1 970 aa31.34■■■□□ 2.61
PMPCA-208ENST00000614402 TMEM94Q12767 1356 aa31.31■■■□□ 2.6
PMPCA-208ENST00000614402 NKTRP30414 1462 aaKnown RBP31.31■■■□□ 2.6
PMPCA-208ENST00000614402 RIMS2Q9UQ26 1411 aa31.29■■■□□ 2.6
PMPCA-208ENST00000614402 PLEKHG1Q9ULL1 1385 aa31.29■■■□□ 2.6
PMPCA-208ENST00000614402 PPARGC1BQ86YN6 1023 aaKnown RBP31.24■■■□□ 2.59
PMPCA-208ENST00000614402 NUP155O75694 1391 aa31.23■■■□□ 2.59
PMPCA-208ENST00000614402 FAM135BQ49AJ0 1406 aa31.23■■■□□ 2.59
PMPCA-208ENST00000614402 ITGAEP38570 1179 aa31.22■■■□□ 2.59
PMPCA-208ENST00000614402 SENP3Q9H4L4 574 aaPredicted RBP31.21■■■□□ 2.59
PMPCA-208ENST00000614402 CHD2O14647 1828 aaKnown RBP31.21■■■□□ 2.59
PMPCA-208ENST00000614402 PROSER2Q86WR7 435 aaPredicted RBP31.2■■■□□ 2.59
PMPCA-208ENST00000614402 HDGFP51858 240 aaKnown RBP31.19■■■□□ 2.58
PMPCA-208ENST00000614402 PPP1R15AO75807 674 aaPredicted RBP31.18■■■□□ 2.58
PMPCA-208ENST00000614402 RBM33Q96EV2 1170 aaKnown RBP31.18■■■□□ 2.58
PMPCA-208ENST00000614402 BCANQ96GW7 911 aa31.18■■■□□ 2.58
PMPCA-208ENST00000614402 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
PMPCA-208ENST00000614402 RRBP1Q9P2E9 1410 aaKnown RBP31.15■■■□□ 2.58
PMPCA-208ENST00000614402 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.15■■■□□ 2.58
PMPCA-208ENST00000614402 ROBO1Q9Y6N7 1651 aa31.15■■■□□ 2.58
PMPCA-208ENST00000614402 DIP2AQ14689 1571 aa31.14■■■□□ 2.58
PMPCA-208ENST00000614402 CHGAP10645 457 aaKnown RBP31.14■■■□□ 2.58
PMPCA-208ENST00000614402 TBX22Q9Y458 520 aa31.14■■■□□ 2.58
PMPCA-208ENST00000614402 SPHKAPQ2M3C7 1700 aa31.11■■■□□ 2.57
PMPCA-208ENST00000614402 MSH6P52701 1360 aa31.1■■■□□ 2.57
PMPCA-208ENST00000614402 PHF23Q9BUL5 403 aaPredicted RBP31.08■■■□□ 2.57
PMPCA-208ENST00000614402 NUTM2DQ5VT03 806 aaPredicted RBP31.07■■■□□ 2.56
PMPCA-208ENST00000614402 PIK3R4Q99570 1358 aa31.06■■■□□ 2.56
PMPCA-208ENST00000614402 NCOA3Q9Y6Q9 1424 aa31.06■■■□□ 2.56
PMPCA-208ENST00000614402 NAIPQ13075 1403 aa31.03■■■□□ 2.56
PMPCA-208ENST00000614402 TRPM2O94759 1503 aa31.02■■■□□ 2.56
PMPCA-208ENST00000614402 NRXN3Q9Y4C0 1643 aa31.02■■■□□ 2.56
PMPCA-208ENST00000614402 SLAIN2Q9P270 581 aa31■■■□□ 2.55
PMPCA-208ENST00000614402 SETBP1Q9Y6X0 1596 aa30.99■■■□□ 2.55
PMPCA-208ENST00000614402 CLTCL1P53675 1640 aa30.97■■■□□ 2.55
PMPCA-208ENST00000614402 PTPRUQ92729 1446 aa30.97■■■□□ 2.55
PMPCA-208ENST00000614402 RGS17Q9UGC6 210 aaPredicted RBP30.96■■■□□ 2.55
PMPCA-208ENST00000614402 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.95■■■□□ 2.54
PMPCA-208ENST00000614402 PHLPP1O60346 1717 aa30.94■■■□□ 2.54
PMPCA-208ENST00000614402 XRN1Q8IZH2 1706 aaKnown RBP30.93■■■□□ 2.54
PMPCA-208ENST00000614402 HFM1A2PYH4 1435 aa30.91■■■□□ 2.54
PMPCA-208ENST00000614402 NEXMIFQ5QGS0 1516 aa30.91■■■□□ 2.54
PMPCA-208ENST00000614402 AMOTL2Q9Y2J4 779 aa30.9■■■□□ 2.54
PMPCA-208ENST00000614402 COL16A1Q07092 1604 aaPredicted RBP30.9■■■□□ 2.54
PMPCA-208ENST00000614402 C19orf44Q9H6X5 657 aa30.88■■■□□ 2.53
PMPCA-208ENST00000614402 C14orf37Q86TY3 774 aa30.87■■■□□ 2.53
PMPCA-208ENST00000614402 ZNF326Q5BKZ1 582 aaKnown RBP30.86■■■□□ 2.53
PMPCA-208ENST00000614402 CADPS2Q86UW7 1296 aa30.86■■■□□ 2.53
PMPCA-208ENST00000614402 KIF1BO60333 1816 aa30.84■■■□□ 2.53
PMPCA-208ENST00000614402 METP08581 1390 aa30.84■■■□□ 2.53
PMPCA-208ENST00000614402 AHDC1Q5TGY3 1603 aaPredicted RBP30.84■■■□□ 2.53
PMPCA-208ENST00000614402 DCCP43146 1447 aa30.83■■■□□ 2.53
PMPCA-208ENST00000614402 JCADQ9P266 1359 aa30.83■■■□□ 2.53
PMPCA-208ENST00000614402 ATF3P18847 181 aa30.81■■■□□ 2.52
PMPCA-208ENST00000614402 TRIM52Q96A61 297 aa30.75■■■□□ 2.51
PMPCA-208ENST00000614402 SETD1AO15047 1707 aaKnown RBP30.74■■■□□ 2.51
PMPCA-208ENST00000614402 POTEAQ6S8J7 498 aa30.74■■■□□ 2.51
PMPCA-208ENST00000614402 SHPRHQ149N8 1683 aa30.72■■■□□ 2.51
PMPCA-208ENST00000614402 BRINP3Q76B58 766 aa30.72■■■□□ 2.51
PMPCA-208ENST00000614402 MST1RQ04912 1400 aa30.72■■■□□ 2.51
PMPCA-208ENST00000614402 SLC4A1APQ9BWU0 796 aaKnown RBP30.71■■■□□ 2.51
PMPCA-208ENST00000614402 LRP6O75581 1613 aa30.71■■■□□ 2.51
PMPCA-208ENST00000614402 ASXL1Q8IXJ9 1541 aa30.71■■■□□ 2.51
PMPCA-208ENST00000614402 ADGRL3Q9HAR2 1447 aa30.71■■■□□ 2.51
PMPCA-208ENST00000614402 NALCNQ8IZF0 1738 aa30.7■■■□□ 2.5
PMPCA-208ENST00000614402 SPATA31A6Q5VVP1 1343 aa30.69■■■□□ 2.5
PMPCA-208ENST00000614402 PPLO60437 1756 aa30.66■■■□□ 2.5
PMPCA-208ENST00000614402 PTCH1Q13635 1447 aa30.66■■■□□ 2.5
PMPCA-208ENST00000614402 VGFO15240 615 aaPredicted RBP30.66■■■□□ 2.5
PMPCA-208ENST00000614402 RPGRIP1LQ68CZ1 1315 aa30.66■■■□□ 2.5
PMPCA-208ENST00000614402 NHSL1Q5SYE7 1610 aa30.65■■■□□ 2.5
PMPCA-208ENST00000614402 PRAG1Q86YV5 1406 aa30.65■■■□□ 2.5
PMPCA-208ENST00000614402 SETD5Q9C0A6 1442 aa30.6■■■□□ 2.49
PMPCA-208ENST00000614402 ROBO2Q9HCK4 1378 aa30.59■■■□□ 2.49
PMPCA-208ENST00000614402 FOXD1Q16676 465 aa30.58■■■□□ 2.49
PMPCA-208ENST00000614402 CCDC144AA2RUR9 1427 aa30.54■■■□□ 2.48
PMPCA-208ENST00000614402 SPATA31E1Q6ZUB1 1445 aa30.54■■■□□ 2.48
PMPCA-208ENST00000614402 C1orf167Q5SNV9 1468 aa30.53■■■□□ 2.48
PMPCA-208ENST00000614402 LAMC1P11047 1609 aa30.52■■■□□ 2.48
PMPCA-208ENST00000614402 IFT172Q9UG01 1749 aa30.51■■■□□ 2.47
PMPCA-208ENST00000614402 MEX3CQ5U5Q3 659 aaKnown RBP30.51■■■□□ 2.47
PMPCA-208ENST00000614402 MPHOSPH9Q99550 1183 aa30.5■■■□□ 2.47
PMPCA-208ENST00000614402 ZNF772Q68DY9 489 aaPredicted RBP30.47■■■□□ 2.47
PMPCA-208ENST00000614402 DDX17Q92841 729 aaKnown RBP30.47■■■□□ 2.47
PMPCA-208ENST00000614402 LRRC59Q96AG4 307 aaKnown RBP30.47■■■□□ 2.47
PMPCA-208ENST00000614402 ADGRF5Q8IZF2 1346 aa30.47■■■□□ 2.47
PMPCA-208ENST00000614402 PNPLA6Q8IY17 1366 aa30.45■■■□□ 2.47
PMPCA-208ENST00000614402 ANKRD30BQ9BXX2 1392 aa30.43■■■□□ 2.46
PMPCA-208ENST00000614402 NUTM2BA6NNL0 878 aaPredicted RBP30.43■■■□□ 2.46
PMPCA-208ENST00000614402 NUTM2EB1AL46 878 aaPredicted RBP30.43■■■□□ 2.46
PMPCA-208ENST00000614402 NUTM2AQ8IVF1 878 aaPredicted RBP30.43■■■□□ 2.46
PMPCA-208ENST00000614402 CDC42BPGQ6DT37 1551 aa30.42■■■□□ 2.46
PMPCA-208ENST00000614402 TECPR2O15040 1411 aa30.42■■■□□ 2.46
PMPCA-208ENST00000614402 RGL3Q3MIN7 710 aa30.4■■■□□ 2.46
PMPCA-208ENST00000614402 PIK3C2GO75747 1445 aa30.39■■■□□ 2.46
PMPCA-208ENST00000614402 ORAI2Q96SN7 254 aa30.39■■■□□ 2.46
PMPCA-208ENST00000614402 SOS2Q07890 1332 aaPredicted RBP30.38■■■□□ 2.45
PMPCA-208ENST00000614402 KNDC1Q76NI1 1749 aa30.37■■■□□ 2.45
PMPCA-208ENST00000614402 ACIN1Q9UKV3 1341 aaKnown RBP30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms