RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 UNC13AQ9UPW8 1703 aa10.78□□□□□ -0.68
TMCO1-208ENST00000612311 KIAA1211Q6ZU35 1233 aa10.78□□□□□ -0.68
TMCO1-208ENST00000612311 GBP4Q96PP9 640 aa10.77□□□□□ -0.68
TMCO1-208ENST00000612311 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
TMCO1-208ENST00000612311 RIPK4P57078 832 aa10.77□□□□□ -0.69
TMCO1-208ENST00000612311 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.69
TMCO1-208ENST00000612311 SCAPERQ9BY12 1400 aa10.77□□□□□ -0.69
TMCO1-208ENST00000612311 ABCC5O15440 1437 aa10.77□□□□□ -0.69
TMCO1-208ENST00000612311 MTHFSP49914 203 aa10.76□□□□□ -0.69
TMCO1-208ENST00000612311 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
TMCO1-208ENST00000612311 CABP2Q9NPB3 220 aa10.76□□□□□ -0.69
TMCO1-208ENST00000612311 PLB1Q6P1J6 1458 aa10.76□□□□□ -0.69
TMCO1-208ENST00000612311 DZIP1LQ8IYY4 767 aaKnown RBP10.75□□□□□ -0.69
TMCO1-208ENST00000612311 NAP1L2Q9ULW6 460 aaPredicted RBP10.75□□□□□ -0.69
TMCO1-208ENST00000612311 DDX19BQ9UMR2 479 aa10.75□□□□□ -0.69
TMCO1-208ENST00000612311 HDAC5Q9UQL6 1122 aa10.74□□□□□ -0.69
TMCO1-208ENST00000612311 PTPN23Q9H3S7 1636 aa10.74□□□□□ -0.69
TMCO1-208ENST00000612311 DNTTIP2Q5QJE6 756 aaKnown RBP10.74□□□□□ -0.69
TMCO1-208ENST00000612311 GZF1Q9H116 711 aaPredicted RBP10.74□□□□□ -0.69
TMCO1-208ENST00000612311 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
TMCO1-208ENST00000612311 C11orf95C9JLR9 678 aaPredicted RBP10.74□□□□□ -0.69
TMCO1-208ENST00000612311 SLC4A3P48751 1232 aa10.74□□□□□ -0.69
TMCO1-208ENST00000612311 ANKRD45Q5TZF3 282 aa10.74□□□□□ -0.69
TMCO1-208ENST00000612311 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMCO1-208ENST00000612311 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
TMCO1-208ENST00000612311 TCP11L2Q8N4U5 519 aa10.74□□□□□ -0.69
TMCO1-208ENST00000612311 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
TMCO1-208ENST00000612311 GRIN2AQ12879 1464 aa10.73□□□□□ -0.69
TMCO1-208ENST00000612311 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
TMCO1-208ENST00000612311 SLC12A5Q9H2X9 1139 aa10.73□□□□□ -0.69
TMCO1-208ENST00000612311 NCOA1Q15788 1441 aa10.72□□□□□ -0.69
TMCO1-208ENST00000612311 USP35Q9P2H5 1018 aa10.72□□□□□ -0.69
TMCO1-208ENST00000612311 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
TMCO1-208ENST00000612311 NAP1L5Q96NT1 182 aaPredicted RBP10.72□□□□□ -0.69
TMCO1-208ENST00000612311 CAMSAP2Q08AD1 1489 aa10.72□□□□□ -0.69
TMCO1-208ENST00000612311 AKNAQ7Z591 1439 aa10.72□□□□□ -0.69
TMCO1-208ENST00000612311 CCDC141Q6ZP82 1450 aa10.71□□□□□ -0.69
TMCO1-208ENST00000612311 PTMSP20962 102 aa10.71□□□□□ -0.69
TMCO1-208ENST00000612311 PANK1Q8TE04 598 aa10.71□□□□□ -0.69
TMCO1-208ENST00000612311 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
TMCO1-208ENST00000612311 ERBINQ96RT1 1412 aa10.71□□□□□ -0.7
TMCO1-208ENST00000612311 HMOX1P09601 288 aa10.7□□□□□ -0.7
TMCO1-208ENST00000612311 KIF16BQ96L93 1317 aa10.7□□□□□ -0.7
TMCO1-208ENST00000612311 ZNF330Q9Y3S2 320 aaPredicted RBP10.7□□□□□ -0.7
TMCO1-208ENST00000612311 NPHP1O15259 732 aa10.7□□□□□ -0.7
TMCO1-208ENST00000612311 ZNF608Q9ULD9 1512 aaPredicted RBP10.7□□□□□ -0.7
TMCO1-208ENST00000612311 GNAI1P63096 354 aa10.69□□□□□ -0.7
TMCO1-208ENST00000612311 AAMPQ13685 434 aa10.69□□□□□ -0.7
TMCO1-208ENST00000612311 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
TMCO1-208ENST00000612311 SLC52A1Q9NWF4 448 aa10.69□□□□□ -0.7
TMCO1-208ENST00000612311 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
TMCO1-208ENST00000612311 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
TMCO1-208ENST00000612311 TEFQ10587 303 aa10.68□□□□□ -0.7
TMCO1-208ENST00000612311 PRAM1Q96QH2 718 aa10.68□□□□□ -0.7
TMCO1-208ENST00000612311 RAPGEF3O95398 923 aa10.68□□□□□ -0.7
TMCO1-208ENST00000612311 RPRD2Q5VT52 1461 aaKnown RBP10.67□□□□□ -0.7
TMCO1-208ENST00000612311 ST18O60284 1047 aa10.67□□□□□ -0.7
TMCO1-208ENST00000612311 PTPRKQ15262 1439 aa10.66□□□□□ -0.7
TMCO1-208ENST00000612311 GOLGA6L3A6NEY3 463 aa10.66□□□□□ -0.7
TMCO1-208ENST00000612311 CHMP3Q9Y3E7 222 aa10.66□□□□□ -0.7
TMCO1-208ENST00000612311 MSNP26038 577 aaKnown RBP10.66□□□□□ -0.7
TMCO1-208ENST00000612311 PDE3AQ14432 1141 aa10.65□□□□□ -0.7
TMCO1-208ENST00000612311 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
TMCO1-208ENST00000612311 RPGRIP1LQ68CZ1 1315 aa10.65□□□□□ -0.7
TMCO1-208ENST00000612311 C1orf141Q5JVX7 400 aa10.65□□□□□ -0.7
TMCO1-208ENST00000612311 NOL8Q76FK4 1167 aaKnown RBP10.65□□□□□ -0.7
TMCO1-208ENST00000612311 PRKAR2BP31323 418 aa10.64□□□□□ -0.71
TMCO1-208ENST00000612311 RILPL2Q969X0 211 aa10.64□□□□□ -0.71
TMCO1-208ENST00000612311 EXOSC9Q06265 439 aaKnown RBP10.64□□□□□ -0.71
TMCO1-208ENST00000612311 BCAR3O75815 825 aa10.64□□□□□ -0.71
TMCO1-208ENST00000612311 GORABQ5T7V8 394 aa10.64□□□□□ -0.71
TMCO1-208ENST00000612311 EIF2S2P20042 333 aaKnown RBP10.63□□□□□ -0.71
TMCO1-208ENST00000612311 FKBP5Q13451 457 aaPredicted RBP10.63□□□□□ -0.71
TMCO1-208ENST00000612311 MAPKBP1O60336 1514 aa10.63□□□□□ -0.71
TMCO1-208ENST00000612311 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
TMCO1-208ENST00000612311 NECTIN2Q92692 538 aa10.63□□□□□ -0.71
TMCO1-208ENST00000612311 SYAP1Q96A49 352 aaPredicted RBP10.63□□□□□ -0.71
TMCO1-208ENST00000612311 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
TMCO1-208ENST00000612311 PSME1Q06323 249 aa10.62□□□□□ -0.71
TMCO1-208ENST00000612311 CABP1Q9NZU7 370 aa10.62□□□□□ -0.71
TMCO1-208ENST00000612311 KIF14Q15058 1648 aa10.62□□□□□ -0.71
TMCO1-208ENST00000612311 NRDCO43847 1150 aa10.62□□□□□ -0.71
TMCO1-208ENST00000612311 GPATCH8Q9UKJ3 1502 aaKnown RBP10.62□□□□□ -0.71
TMCO1-208ENST00000612311 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
TMCO1-208ENST00000612311 TAF7LQ5H9L4 462 aa10.62□□□□□ -0.71
TMCO1-208ENST00000612311 CDK19Q9BWU1 502 aa10.62□□□□□ -0.71
TMCO1-208ENST00000612311 GOLGA6L6A8MZA4 724 aa10.61□□□□□ -0.71
TMCO1-208ENST00000612311 NLRP6P59044 892 aa10.61□□□□□ -0.71
TMCO1-208ENST00000612311 GSE1Q14687 1217 aa10.61□□□□□ -0.71
TMCO1-208ENST00000612311 TXNDC2Q86VQ3 553 aa10.61□□□□□ -0.71
TMCO1-208ENST00000612311 REC8O95072 547 aa10.61□□□□□ -0.71
TMCO1-208ENST00000612311 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
TMCO1-208ENST00000612311 TSR2Q969E8 191 aaKnown RBP10.61□□□□□ -0.71
TMCO1-208ENST00000612311 CDK11BP21127 795 aaKnown RBP10.6□□□□□ -0.71
TMCO1-208ENST00000612311 UGGT2Q9NYU1 1516 aa10.6□□□□□ -0.71
TMCO1-208ENST00000612311 C22orf23Q9BZE7 217 aa10.6□□□□□ -0.71
TMCO1-208ENST00000612311 C9orf78Q9NZ63 289 aaPredicted RBP10.6□□□□□ -0.71
TMCO1-208ENST00000612311 HTATSF1O43719 755 aaKnown RBP10.59□□□□□ -0.71
TMCO1-208ENST00000612311 CHMP5Q9NZZ3 219 aa10.59□□□□□ -0.71
TMCO1-208ENST00000612311 NEXNQ0ZGT2 675 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms