RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 MYO5BQ9ULV0 1848 aa25.84■■□□□ 1.73
TVP23A-210ENST00000612195 ZFYVE9O95405 1425 aa25.82■■□□□ 1.72
TVP23A-210ENST00000612195 NWD1Q149M9 1564 aa25.81■■□□□ 1.72
TVP23A-210ENST00000612195 GCC2Q8IWJ2 1684 aa25.8■■□□□ 1.72
TVP23A-210ENST00000612195 NKTRP30414 1462 aaKnown RBP25.8■■□□□ 1.72
TVP23A-210ENST00000612195 UNC13BO14795 1591 aa25.8■■□□□ 1.72
TVP23A-210ENST00000612195 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
TVP23A-210ENST00000612195 TMEM131LA2VDJ0 1609 aa25.79■■□□□ 1.72
TVP23A-210ENST00000612195 PPP1R15AO75807 674 aaPredicted RBP25.79■■□□□ 1.72
TVP23A-210ENST00000612195 HDGFP51858 240 aaKnown RBP25.79■■□□□ 1.72
TVP23A-210ENST00000612195 PLEKHG1Q9ULL1 1385 aa25.79■■□□□ 1.72
TVP23A-210ENST00000612195 ROBO1Q9Y6N7 1651 aa25.77■■□□□ 1.72
TVP23A-210ENST00000612195 RGS17Q9UGC6 210 aaPredicted RBP25.77■■□□□ 1.72
TVP23A-210ENST00000612195 CHGAP10645 457 aaKnown RBP25.76■■□□□ 1.71
TVP23A-210ENST00000612195 ROCK1Q13464 1354 aa25.76■■□□□ 1.71
TVP23A-210ENST00000612195 E9PCH4 1651 aa25.75■■□□□ 1.71
TVP23A-210ENST00000612195 CHD2O14647 1828 aaKnown RBP25.74■■□□□ 1.71
TVP23A-210ENST00000612195 MSH6P52701 1360 aa25.74■■□□□ 1.71
TVP23A-210ENST00000612195 NUTM2DQ5VT03 806 aaPredicted RBP25.72■■□□□ 1.71
TVP23A-210ENST00000612195 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.72■■□□□ 1.71
TVP23A-210ENST00000612195 TBX22Q9Y458 520 aa25.72■■□□□ 1.71
TVP23A-210ENST00000612195 IQGAP3Q86VI3 1631 aa25.71■■□□□ 1.71
TVP23A-210ENST00000612195 ITGAEP38570 1179 aa25.71■■□□□ 1.71
TVP23A-210ENST00000612195 SLAIN2Q9P270 581 aa25.71■■□□□ 1.71
TVP23A-210ENST00000612195 NUP155O75694 1391 aa25.69■■□□□ 1.7
TVP23A-210ENST00000612195 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
TVP23A-210ENST00000612195 ADAMTS13Q76LX8 1427 aa25.66■■□□□ 1.7
TVP23A-210ENST00000612195 C14orf37Q86TY3 774 aa25.62■■□□□ 1.69
TVP23A-210ENST00000612195 PHLPP1O60346 1717 aa25.62■■□□□ 1.69
TVP23A-210ENST00000612195 POTEAQ6S8J7 498 aa25.61■■□□□ 1.69
TVP23A-210ENST00000612195 NCOA3Q9Y6Q9 1424 aa25.61■■□□□ 1.69
TVP23A-210ENST00000612195 DIP2AQ14689 1571 aa25.6■■□□□ 1.69
TVP23A-210ENST00000612195 PIK3R4Q99570 1358 aa25.59■■□□□ 1.69
TVP23A-210ENST00000612195 JCADQ9P266 1359 aa25.56■■□□□ 1.68
TVP23A-210ENST00000612195 C19orf44Q9H6X5 657 aa25.56■■□□□ 1.68
TVP23A-210ENST00000612195 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.56■■□□□ 1.68
TVP23A-210ENST00000612195 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
TVP23A-210ENST00000612195 AMOTL2Q9Y2J4 779 aa25.55■■□□□ 1.68
TVP23A-210ENST00000612195 TRPM2O94759 1503 aa25.54■■□□□ 1.68
TVP23A-210ENST00000612195 ATF3P18847 181 aa25.54■■□□□ 1.68
TVP23A-210ENST00000612195 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
TVP23A-210ENST00000612195 COL16A1Q07092 1604 aaPredicted RBP25.53■■□□□ 1.68
TVP23A-210ENST00000612195 SPHKAPQ2M3C7 1700 aa25.51■■□□□ 1.68
TVP23A-210ENST00000612195 ZNF326Q5BKZ1 582 aaKnown RBP25.5■■□□□ 1.67
TVP23A-210ENST00000612195 NRXN3Q9Y4C0 1643 aa25.48■■□□□ 1.67
TVP23A-210ENST00000612195 SETBP1Q9Y6X0 1596 aa25.46■■□□□ 1.67
TVP23A-210ENST00000612195 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.67
TVP23A-210ENST00000612195 XRN1Q8IZH2 1706 aaKnown RBP25.43■■□□□ 1.66
TVP23A-210ENST00000612195 SPATA31A6Q5VVP1 1343 aa25.43■■□□□ 1.66
TVP23A-210ENST00000612195 BRINP3Q76B58 766 aa25.43■■□□□ 1.66
TVP23A-210ENST00000612195 LRP6O75581 1613 aa25.43■■□□□ 1.66
TVP23A-210ENST00000612195 METP08581 1390 aa25.43■■□□□ 1.66
TVP23A-210ENST00000612195 CLTCL1P53675 1640 aa25.41■■□□□ 1.66
TVP23A-210ENST00000612195 RRBP1Q9P2E9 1410 aaKnown RBP25.4■■□□□ 1.66
TVP23A-210ENST00000612195 DCCP43146 1447 aa25.39■■□□□ 1.66
TVP23A-210ENST00000612195 NAIPQ13075 1403 aa25.39■■□□□ 1.66
TVP23A-210ENST00000612195 MEX3CQ5U5Q3 659 aaKnown RBP25.39■■□□□ 1.66
TVP23A-210ENST00000612195 SHPRHQ149N8 1683 aa25.39■■□□□ 1.65
TVP23A-210ENST00000612195 NEXMIFQ5QGS0 1516 aa25.38■■□□□ 1.65
TVP23A-210ENST00000612195 SETD1AO15047 1707 aaKnown RBP25.36■■□□□ 1.65
TVP23A-210ENST00000612195 MST1RQ04912 1400 aa25.36■■□□□ 1.65
TVP23A-210ENST00000612195 ASXL1Q8IXJ9 1541 aa25.35■■□□□ 1.65
TVP23A-210ENST00000612195 KIF1BO60333 1816 aa25.35■■□□□ 1.65
TVP23A-210ENST00000612195 ZNF772Q68DY9 489 aaPredicted RBP25.33■■□□□ 1.65
TVP23A-210ENST00000612195 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
TVP23A-210ENST00000612195 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
TVP23A-210ENST00000612195 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
TVP23A-210ENST00000612195 TRIM52Q96A61 297 aa25.32■■□□□ 1.64
TVP23A-210ENST00000612195 ADGRL3Q9HAR2 1447 aa25.31■■□□□ 1.64
TVP23A-210ENST00000612195 NHSL1Q5SYE7 1610 aa25.29■■□□□ 1.64
TVP23A-210ENST00000612195 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
TVP23A-210ENST00000612195 NALCNQ8IZF0 1738 aa25.28■■□□□ 1.64
TVP23A-210ENST00000612195 VGFO15240 615 aaPredicted RBP25.27■■□□□ 1.64
TVP23A-210ENST00000612195 DDX17Q92841 729 aaKnown RBP25.27■■□□□ 1.64
TVP23A-210ENST00000612195 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
TVP23A-210ENST00000612195 HFM1A2PYH4 1435 aa25.26■■□□□ 1.63
TVP23A-210ENST00000612195 SLC4A1APQ9BWU0 796 aaKnown RBP25.25■■□□□ 1.63
TVP23A-210ENST00000612195 RXRBP28702 533 aa25.22■■□□□ 1.63
TVP23A-210ENST00000612195 ROBO2Q9HCK4 1378 aa25.21■■□□□ 1.63
TVP23A-210ENST00000612195 AFF2P51816 1311 aa25.21■■□□□ 1.63
TVP23A-210ENST00000612195 RPGRIP1LQ68CZ1 1315 aa25.21■■□□□ 1.63
TVP23A-210ENST00000612195 PTCH1Q13635 1447 aa25.2■■□□□ 1.63
TVP23A-210ENST00000612195 C1orf167Q5SNV9 1468 aa25.2■■□□□ 1.62
TVP23A-210ENST00000612195 PNPLA6Q8IY17 1366 aa25.18■■□□□ 1.62
TVP23A-210ENST00000612195 UPF1Q92900 1129 aaKnown RBP eCLIP25.17■■□□□ 1.62
TVP23A-210ENST00000612195 PPLO60437 1756 aa25.16■■□□□ 1.62
TVP23A-210ENST00000612195 FOXD1Q16676 465 aa25.16■■□□□ 1.62
TVP23A-210ENST00000612195 C8orf37Q96NL8 207 aa25.16■■□□□ 1.62
TVP23A-210ENST00000612195 ORAI2Q96SN7 254 aa25.16■■□□□ 1.62
TVP23A-210ENST00000612195 PRAG1Q86YV5 1406 aa25.13■■□□□ 1.61
TVP23A-210ENST00000612195 LAMC1P11047 1609 aa25.12■■□□□ 1.61
TVP23A-210ENST00000612195 CDK12Q9NYV4 1490 aaPredicted RBP25.11■■□□□ 1.61
TVP23A-210ENST00000612195 QTRT2Q9H974 415 aaKnown RBP25.11■■□□□ 1.61
TVP23A-210ENST00000612195 SOS2Q07890 1332 aaPredicted RBP25.11■■□□□ 1.61
TVP23A-210ENST00000612195 ADAMTS2O95450 1211 aa25.1■■□□□ 1.61
TVP23A-210ENST00000612195 NGLY1Q96IV0 654 aa25.08■■□□□ 1.61
TVP23A-210ENST00000612195 ADGRF5Q8IZF2 1346 aa25.08■■□□□ 1.6
TVP23A-210ENST00000612195 RGL3Q3MIN7 710 aa25.07■■□□□ 1.6
TVP23A-210ENST00000612195 RBM6P78332 1123 aaKnown RBP25.06■■□□□ 1.6
TVP23A-210ENST00000612195 CCDC144AA2RUR9 1427 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms