RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 MTHFSP49914 203 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 DZIP1LQ8IYY4 767 aaKnown RBP4.75□□□□□ -1.65
RNF38-210ENST00000611646 BCL11BQ9C0K0 894 aaPredicted RBP4.75□□□□□ -1.65
RNF38-210ENST00000611646 NCAPD3P42695 1498 aa4.74□□□□□ -1.65
RNF38-210ENST00000611646 PCF11O94913 1555 aaKnown RBP4.74□□□□□ -1.65
RNF38-210ENST00000611646 SLC12A5Q9H2X9 1139 aa4.74□□□□□ -1.65
RNF38-210ENST00000611646 USP35Q9P2H5 1018 aa4.74□□□□□ -1.65
RNF38-210ENST00000611646 DDX49Q9Y6V7 483 aaKnown RBP4.74□□□□□ -1.65
RNF38-210ENST00000611646 TCP11L2Q8N4U5 519 aa4.74□□□□□ -1.65
RNF38-210ENST00000611646 BRD4O60885 1362 aaPredicted RBP4.74□□□□□ -1.65
RNF38-210ENST00000611646 CALD1Q05682 793 aaKnown RBP4.74□□□□□ -1.65
RNF38-210ENST00000611646 BACH2Q9BYV9 841 aa4.74□□□□□ -1.65
RNF38-210ENST00000611646 KIAA1211Q6ZU35 1233 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 CHMP3Q9Y3E7 222 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 TRHP20396 242 aaPredicted RBP4.73□□□□□ -1.65
RNF38-210ENST00000611646 RSPH4AQ5TD94 716 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 NUTM2GQ5VZR2 741 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 STK31Q9BXU1 1019 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 AMPHP49418 695 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 NGDNQ8NEJ9 315 aaKnown RBP4.73□□□□□ -1.65
RNF38-210ENST00000611646 RUNDC1Q96C34 613 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 POLA1P09884 1462 aaPredicted RBP4.73□□□□□ -1.65
RNF38-210ENST00000611646 EIF2S2P20042 333 aaKnown RBP4.73□□□□□ -1.65
RNF38-210ENST00000611646 NGEFQ8N5V2 710 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 C22orf23Q9BZE7 217 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 PDZRN3Q9UPQ7 1066 aa4.73□□□□□ -1.65
RNF38-210ENST00000611646 DIAPH1O60610 1272 aaKnown RBP4.72□□□□□ -1.65
RNF38-210ENST00000611646 EVC2Q86UK5 1308 aa4.72□□□□□ -1.65
RNF38-210ENST00000611646 EXOSC9Q06265 439 aaKnown RBP4.72□□□□□ -1.65
RNF38-210ENST00000611646 DAPK1P53355 1430 aa4.72□□□□□ -1.65
RNF38-210ENST00000611646 SMG6Q86US8 1419 aaKnown RBP4.72□□□□□ -1.65
RNF38-210ENST00000611646 MAPKBP1O60336 1514 aa4.72□□□□□ -1.65
RNF38-210ENST00000611646 HSP90B1P14625 803 aaKnown RBP4.71□□□□□ -1.65
RNF38-210ENST00000611646 MCTP1Q6DN14 999 aa4.71□□□□□ -1.65
RNF38-210ENST00000611646 PTPRKQ15262 1439 aa4.71□□□□□ -1.65
RNF38-210ENST00000611646 KIAA1107Q9UPP5 1409 aa4.71□□□□□ -1.65
RNF38-210ENST00000611646 CSB-PGBD3P0DP91 1061 aa4.71□□□□□ -1.66
RNF38-210ENST00000611646 MPNDQ8N594 471 aa4.71□□□□□ -1.66
RNF38-210ENST00000611646 TOPBP1Q92547 1522 aa4.71□□□□□ -1.66
RNF38-210ENST00000611646 COG3Q96JB2 828 aa4.71□□□□□ -1.66
RNF38-210ENST00000611646 NOB1Q9ULX3 412 aaKnown RBP4.71□□□□□ -1.66
RNF38-210ENST00000611646 DDX19BQ9UMR2 479 aa4.71□□□□□ -1.66
RNF38-210ENST00000611646 C9orf84Q5VXU9 1444 aa4.71□□□□□ -1.66
RNF38-210ENST00000611646 ST18O60284 1047 aa4.71□□□□□ -1.66
RNF38-210ENST00000611646 DDX11L8A8MPP1 907 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 FOSBP53539 338 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 CYB5RLQ6IPT4 315 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 VSIG10Q8N0Z9 540 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 VGFO15240 615 aaPredicted RBP4.7□□□□□ -1.66
RNF38-210ENST00000611646 ARHGAP5Q13017 1502 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 HMMRO75330 724 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 CHAF1AQ13111 956 aaPredicted RBP4.7□□□□□ -1.66
RNF38-210ENST00000611646 HSP90AA2PQ14568 343 aaPredicted RBP4.7□□□□□ -1.66
RNF38-210ENST00000611646 RNF214Q8ND24 703 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 FBXW7Q969H0 707 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 EHBP1L1Q8N3D4 1523 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 THUMPD2Q9BTF0 503 aaKnown RBP4.7□□□□□ -1.66
RNF38-210ENST00000611646 ANO2Q9NQ90 1003 aa4.7□□□□□ -1.66
RNF38-210ENST00000611646 ANKRD30BQ9BXX2 1392 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 KIAA2012Q0VF49 1180 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 CHMP5Q9NZZ3 219 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 MIA2Q96PC5 1412 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 BIVM-ERCC5R4GMW8 1640 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 NPHP1O15259 732 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 PRKAR2BP31323 418 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 FKBP5Q13451 457 aaPredicted RBP4.69□□□□□ -1.66
RNF38-210ENST00000611646 GNL2Q13823 731 aaKnown RBP4.69□□□□□ -1.66
RNF38-210ENST00000611646 ERBINQ96RT1 1412 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 EPRSP07814 1512 aaKnown RBP4.69□□□□□ -1.66
RNF38-210ENST00000611646 TRAK2O60296 914 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 HDGFP51858 240 aaKnown RBP4.69□□□□□ -1.66
RNF38-210ENST00000611646 FAM13BQ9NYF5 915 aa4.69□□□□□ -1.66
RNF38-210ENST00000611646 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNF38-210ENST00000611646 PRAM1Q96QH2 718 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 PPP6R1Q9UPN7 881 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 MAP4K4O95819 1239 aaPredicted RBP4.68□□□□□ -1.66
RNF38-210ENST00000611646 PPP4R3CPQ6ZMV5 832 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 ARHGEF11O15085 1522 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 ABCC5O15440 1437 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 RSPH6AQ9H0K4 717 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 PLB1Q6P1J6 1458 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 SUPT6HQ7KZ85 1726 aaKnown RBP4.68□□□□□ -1.66
RNF38-210ENST00000611646 KDM4AO75164 1064 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 FBLN1P23142 703 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 LMOD3Q0VAK6 560 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 CREBRFQ8IUR6 639 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 PTPN23Q9H3S7 1636 aa4.68□□□□□ -1.66
RNF38-210ENST00000611646 EFCAB5A4FU69 1503 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 RRS1Q15050 365 aaKnown RBP4.67□□□□□ -1.66
RNF38-210ENST00000611646 CCDC27Q2M243 656 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 CAVIN1Q6NZI2 390 aaKnown RBP4.67□□□□□ -1.66
RNF38-210ENST00000611646 WWC1Q8IX03 1113 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 CABP1Q9NZU7 370 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 TSPYL4Q9UJ04 414 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 GRIN2BQ13224 1484 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 SNAPC4Q5SXM2 1469 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 CC2D2AQ9P2K1 1620 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 SLFN5Q08AF3 891 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 GORABQ5T7V8 394 aa4.67□□□□□ -1.66
RNF38-210ENST00000611646 SYAP1Q96A49 352 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms